CK937540

Overview
NameCK937540
Unique NameCK937540
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 1.594e-33
Identity = 72/192 (37.50%), Postives = 109/192 (56.77%), Query Frame = -1
Query:    1 FI*QDLFVAGTDTTSSTLEWAMAELLRSPDA----------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTW-ENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLE----DENMDMEEKFGI 477
            F+  D+F+ G  T+S+ LEW M EL+R+P+                             YL+AV+KE  R+HP +PL+LPR    DV++ G+ +  G +V +NAW+I RD   W  +   F PER L S LD+ G++ + IPFGSGRRICPG+ LA+ ++ + L +L+  FDW ++     +  D+ E FG+
Sbjct:  290 FMILDMFIGGISTSSTLLEWIMTELIRNPECMKKLQNEIRSTIRPHGSYIKEKEVENMRYLKAVIKEVFRVHPPLPLILPRLLTEDVKVKGYDIAAGTEVLINAWSIHRDPAIWGPDAEEFKPERHLDSTLDYHGQDLKYIPFGSGRRICPGINLAMGLVEVTLANLVGRFDWSVDPGPNGDQPDLAEDFGL 481          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C83B1_ARATH (Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.082e-33
Identity = 74/185 (40.00%), Postives = 108/185 (58.38%), Query Frame = -1
Query:   19 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTW-ENPLSFMPERFLGSN--LDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL------EDENMDM 465
            D+ V GTDT ++ + WAM  L++ P+A                           YL+AV+KE+LRL P +P+LL R+ +AD +I G+ +P    + VNAWA+ RD   W +NP  F+PERF+  +  +DFKG++FEL+PFGSGRR+CP + L I M+ +   +L+  FDW L      ED  MD+
Sbjct:  295 DIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRSVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMNEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDV 479          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71BA_ARATH (Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=CYP71B10 PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.082e-33
Identity = 70/189 (37.04%), Postives = 111/189 (58.73%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPD------------------------------AYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEEKFGI 465
            ++ + G +T++ T+ WAMAEL+R+P                               +YL  V+KET RLHP  PLL+PR+ +++ +I G+ +    ++ VN WAIGRD   W++P  F+PERF+  ++D KG+++EL+PFGSGRRICP + + I  +   L +L+  FDWKL +    E++ M+E  G+
Sbjct:  297 NILLGGINTSAITMTWAMAELIRNPRVMKKVQSEIRAQIGKNNKTRIISLDEINHLSYLNMVIKETCRLHPVAPLLVPREVISEFKINGYTIQPKTRLHVNVWAIGRDPEIWKDPEEFLPERFMDCDIDVKGQDYELLPFGSGRRICPAVYMGITTVEFGLANLLYHFDWKLPEGVAVEDIYMDEASGL 485          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C7D94_MENGR (Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D94 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 3.551e-33
Identity = 74/183 (40.44%), Postives = 107/183 (58.47%), Query Frame = -1
Query:   16 QGFI*QDLFVAGTDTTSSTLEWAMAELLRSPD---------------------------AYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDENMDME 483
            +GFI  + F AG + +S+T+ WA++EL+R+P                             Y+++VVKETLRLHP  P L+PR++  + EI GF +P   ++ +NAW+IGRD L WE+P +F PERF   + DF G +FE IPFG+G+RICPGL   +  + + L  L+  FDWKL     D +
Sbjct:  287 KGFI-FNTFSAGAEASSTTISWALSELMRNPAKMAKVQAEVREALKGKTSVDLSEMQELKYMRSVVKETLRLHPPFP-LIPRQSREECEINGFYIPARTRILINAWSIGRDPLYWEDPDTFRPERFDEVSRDFMGNDFEFIPFGAGQRICPGLHFGLANVEIPLAQLLYHFDWKLPQGMTDAD 467          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71AO_ARATH (Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=CYP71A24 PE=2 SV=3)

HSP 1 Score: 140.969 bits (354), Expect = 3.551e-33
Identity = 70/178 (39.33%), Postives = 106/178 (59.55%), Query Frame = -1
Query:   16 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTW-ENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDENMDME 465
            D+FV   DTT + LEWAM ELL   +                            YL+AV+KETLRLHP +PL++P ++  DV++  + +P G  V +NAWAIGR+  TW  +   F PER L S +D++G++ EL+PFG+GRRICP +  A+ +  ++L +L++ FDW L +E+ + +
Sbjct:  289 DVFVGDMDTTYTLLEWAMTELLCHHECLDRLQEEVRMVCKDKSGVSEDDLQDMKYLKAVIKETLRLHPPLPLMVPHESTHDVKLRDYHIPAGTHVMINAWAIGREAATWGPDAEEFRPERHLNSYVDYRGQDTELVPFGAGRRICPAISFAVVLDEVVLANLVHQFDWTLPEESTEYQ 466          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71DF_MENPI (Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D15 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 4.637e-33
Identity = 71/186 (38.17%), Postives = 106/186 (56.99%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEEKFGI 465
            D F AGT+T+S+T  W +AEL+R+P                             Y+++VVKET+R+HP +P L+PR    +  + G+ +P  A++ +N W++GR+ L WE P +F PERF   + DF G +FE +PFG+GRRICPGL   +  + + L  L+  FDWKL +     +MDM E  G+
Sbjct:  295 DTFSAGTETSSTTTLWVLAELMRNPAVMAKAQAEVRAALKEKTNWDVDDVQELKYMKSVVKETMRMHPPIP-LIPRSCREECVVNGYTIPNKARIMINVWSMGRNPLYWEKPDTFWPERFDQVSKDFMGNDFEFVPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMKPSDMDMSEAEGL 479          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71B5_ARATH (Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CYP71B5 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 6.056e-33
Identity = 70/183 (38.25%), Postives = 104/183 (56.83%), Query Frame = -1
Query:   13 DLFVAGTDTTSSTLEWAMAELLRSPDA----------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEE 465
            D+F+AG +  S T+ W M EL R P                              YL+ V++E  RLHP  PLLLPR  ++D+ I G+ +PK   + +N + IGRD   W  P  F+PERF+ + +++KG++FEL+PFG+GRR+CPG+   I ++ L L SL+  FDW L +    +++DMEE
Sbjct:  295 DVFLAGVNAGSITMIWTMTELSRHPRVMRKLQEEIRAALGPNKEKITEEDLEKVEYLKMVIEEAFRLHPPAPLLLPRLTMSDINIQGYSIPKNTMIQINTYTIGRDPKNWTKPDEFIPERFVDNPIEYKGQHFELLPFGAGRRVCPGMATGITIVELGLLSLLYFFDWSLPNGMTTKDIDMEE 477          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71B8_ARATH (Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CYP71B8 PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 7.910e-33
Identity = 70/183 (38.25%), Postives = 106/183 (57.92%), Query Frame = -1
Query:   13 DLFVAGTDTTSSTLEWAMAELLRSPDA----------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEE 465
            D+ + G +  + T+ W M EL R P                              YL+ V+KET RLHP  P LLPR+ ++D+EI G+ +PK A + ++ +AIGRD   W NP  F PERF  +++++KG+++EL+PFG+GRR CPG+ L I +L L L +++  FDW L +    +++DMEE
Sbjct:  299 DIVLGGVNAGTITMIWTMTELTRHPRVMKKLREEIRATLGPNKERITEEDLEKVEYLKLVIKETFRLHPPGPFLLPRQVMSDIEIQGYHIPKNAHIKISTYAIGRDPKCWTNPEEFNPERFANTSINYKGQHYELLPFGAGRRSCPGMTLGITILELGLLNILYYFDWSLPNGMTIKDIDMEE 481          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C99A3_ORYSJ (Cytochrome P450 99A3 OS=Oryza sativa subsp. japonica GN=CYP99A3 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.301e-32
Identity = 72/182 (39.56%), Postives = 102/182 (56.04%), Query Frame = -1
Query:   16 DLFVAGTDTTSSTLEWAMAELLRSPD----------------------------AYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDME 465
            D+F  GT+TTSST EW M+EL+R+P+                            +Y++ V+KETLRL+P +PLLLP       EI G+ + +G +V +N+WA+ R    W++   F+PERF     DFKG  FE +PFG+GRR CPG   A+  L L++  L+  FDW L D     ++DME
Sbjct:  294 DMFTGGTETTSSTTEWLMSELMRNPEVMAKVQAEVRGVFDNKSPQDHEGLLENLSYMKLVIKETLRLNPVLPLLLPHLCRETCEIGGYEIVEGTRVLINSWAMARSPEYWDDAEKFIPERFEDGTADFKGSRFEYLPFGTGRRRCPGDIFAMATLELIVARLLYYFDWSLPDGMQPGDIDME 475          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C93B1_GLYEC (Licodione synthase OS=Glycyrrhiza echinata GN=CYP93B1 PE=1 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 3.006e-32
Identity = 68/173 (39.31%), Postives = 104/173 (60.12%), Query Frame = -1
Query:   46 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFL------GSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDW 465
            D F AGTDTT+ + EWA+ EL++ P                             YLQA++KET RLHP VP++  R+ +A+  +  +++P+ + +FVN W+IGR+   W+NPL F PERFL         +D +G +F+L+PFGSGRR+CPG+ LA++ +  +LG++I  FD+
Sbjct:  300 DFFTAGTDTTAISTEWALVELVKKPSVLQKVREEIDNVVGKDRLVEESDCPNLPYLQAILKETFRLHPPVPMVT-RRCVAECTVENYVIPEDSLLFVNVWSIGRNPKFWDNPLEFRPERFLKLEGDSSGVVDVRGSHFQLLPFGSGRRMCPGVSLAMQEVPALLGAIIQCFDF 471          
The following BLAST results are available for this feature:
BLAST of CK937540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 439
Match NameE-valueIdentityDescription
C71AI_ARATH1.594e-3337.50Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C83B1_ARATH2.082e-3340.00Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CY... [more]
C71BA_ARATH2.082e-3337.04Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=C... [more]
C7D94_MENGR3.551e-3340.44Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D... [more]
C71AO_ARATH3.551e-3339.33Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=C... [more]
C71DF_MENPI4.637e-3338.17Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D... [more]
C71B5_ARATH6.056e-3338.25Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CY... [more]
C71B8_ARATH7.910e-3338.25Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CY... [more]
C99A3_ORYSJ2.301e-3239.56Cytochrome P450 99A3 OS=Oryza sativa subsp. japoni... [more]
C93B1_GLYEC3.006e-3239.31Licodione synthase OS=Glycyrrhiza echinata GN=CYP9... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004779_C06 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0003_IIIF_C06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937540 ID=CK937540; Name=CK937540; organism=Citrus sinensis; type=EST; length=540bp
GATGCCAAATTTTTCTTCCATATCCATGTTCTCATCTTCCAGCTTCCAAT
CAAAGGAGTTAATGAGTGAACCCAACATTAGATGTAACATTCTAATTGCC
AACGGCAAACCAGGACATATTCGCCGGCCGGATCCAAAGGGGATCAGCTC
AAAATTTCTGCCTTTGAAATCGAGATTTGACCCCAAGAATCTCTCAGGCA
TAAAAGAAAGAGGGTTCTCCCATGTGAGTTCATCTCTGCCAATTGCCCAC
GCATTAACAAAAACCTGTGCTCCTTTTGGAACTATGAAGCCCGCAATTTC
TACGTCGGCTAAAGCTTTACGAGGAAGTAACAAGGGAACTGCTGGGTGCA
GCCTCAAGGTTTCTTTGACTACTGCTTGTAGATAAGCATCCGGACTGCGG
AGTAGCTCCGCCATCGCCCATTCCAGTGTGCTTGAAGTGGTGTCAGTCCC
AGCAACAAACAAATCCTGTTATATAAACCCCTGTTAAATCACTTGAAATT
TGTGCAAGCAAAAAGGAGGAAAGAGAAATAAAGAAATATT
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