CK937529

Overview
NameCK937529
Unique NameCK937529
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length628
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937529 vs. ExPASy Swiss-Prot
Match: RL32_DROMD (60S ribosomal protein L32 OS=Drosophila madeirensis GN=RpL32 PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.550e-39
Identity = 78/114 (68.42%), Postives = 92/114 (80.70%), Query Frame = 3
Query:  111 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDIVVTNKLARLRSQEDE 452
            R QSDR   +   WR+PKGID+RVRR+FKG  LMPNIGYGS+K+TRH LP GFKKF+VHN +ELE+L+M NR YC EIAH VS++KRKEIVERA QL I +TN   RLRSQE+E
Sbjct:   21 RHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRIYCGEIAHAVSSKKRKEIVERAKQLSIRLTNPNGRLRSQENE 134          
BLAST of CK937529 vs. ExPASy Swiss-Prot
Match: RL32_DROGU (60S ribosomal protein L32 OS=Drosophila guanche GN=RpL32 PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.550e-39
Identity = 78/114 (68.42%), Postives = 92/114 (80.70%), Query Frame = 3
Query:  111 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDIVVTNKLARLRSQEDE 452
            R QSDR   +   WR+PKGID+RVRR+FKG  LMPNIGYGS+K+TRH LP GFKKF+VHN +ELE+L+M NR YC EIAH VS++KRKEIVERA QL I +TN   RLRSQE+E
Sbjct:   21 RHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRIYCGEIAHAVSSKKRKEIVERAKQLSIRLTNPNGRLRSQENE 134          
BLAST of CK937529 vs. ExPASy Swiss-Prot
Match: RL32_DROBF (60S ribosomal protein L32 OS=Drosophila bifasciata GN=RpL32 PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.550e-39
Identity = 78/114 (68.42%), Postives = 92/114 (80.70%), Query Frame = 3
Query:  111 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDIVVTNKLARLRSQEDE 452
            R QSDR   +   WR+PKGID+RVRR+FKG  LMPNIGYGS+K+TRH LP GFKKF+VHN +ELE+L+M NR YC EIAH VS++KRKEIVERA QL I +TN   RLRSQE+E
Sbjct:   21 RHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRIYCGEIAHAVSSKKRKEIVERAKQLSIRLTNPNGRLRSQENE 134          
BLAST of CK937529 vs. ExPASy Swiss-Prot
Match: RL32_APIME (60S ribosomal protein L32 OS=Apis mellifera GN=RpL32 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.644e-39
Identity = 80/114 (70.18%), Postives = 92/114 (80.70%), Query Frame = 3
Query:  111 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDIVVTNKLARLRSQEDE 452
            R QSDR   +K NWR+PKGID+RVRR+FKG  LMPNIGYGS+KKTRH LP GF+K +VHN KELE+LMM NR +CAEIAH  S++KRK IVERA QL I VT   ARLRSQE+E
Sbjct:   21 RHQSDRYSKLKRNWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPTGFRKVLVHNVKELEVLMMQNRKFCAEIAHGGSSKKRKSIVERAQQLSIRVTYASARLRSQENE 134          
BLAST of CK937529 vs. ExPASy Swiss-Prot
Match: RL32P_MOUSE (Putative 60S ribosomal protein L32' OS=Mus musculus GN=Rpl32-ps PE=5 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 1.358e-35
Identity = 73/114 (64.04%), Postives = 93/114 (81.58%), Query Frame = 3
Query:  111 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDIVVTNKLARLRSQEDE 452
            R QSDR + +K NWR+P+GID+RVRR+FKG  LMPNIGY S+KKT+H L +GF+KF+VHN KE E+L+M N++Y AEIAH+VS++ RK IVERAAQL I VTN   RL S+E+E
Sbjct:   22 RHQSDRYVKIKWNWRKPRGIDNRVRRRFKGQILMPNIGYRSNKKTKHTLSSGFRKFLVHNIKEPEVLLMCNKSYRAEIAHNVSSKNRKAIVERAAQLAIRVTNPNTRLHSEENE 135          
BLAST of CK937529 vs. ExPASy Swiss-Prot
Match: RL32_NEUCR (60S ribosomal protein L32 OS=Neurospora crassa GN=rpl-32 PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.831e-33
Identity = 66/111 (59.46%), Postives = 88/111 (79.28%), Query Frame = 3
Query:  111 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDIVVTNKLARLRSQ 443
            R QSDR + V   WR+PKGID+RVRR+F+G   MP+IGYGS+KKTRH +P+G K F+V N K++ELL+MHN+TY AEIAH+VS+RKR EI+ RA QL + VTN  A++ ++
Sbjct:   20 RHQSDRFMRVDSAWRKPKGIDNRVRRRFRGTLAMPSIGYGSNKKTRHMMPSGHKAFLVSNVKDVELLLMHNKTYAAEIAHNVSSRKRIEIIARAKQLSVKVTNAKAKVTTE 130          
BLAST of CK937529 vs. ExPASy Swiss-Prot
Match: RL32A_SCHPO (60S ribosomal protein L32-A OS=Schizosaccharomyces pombe GN=rpl32a PE=1 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 9.107e-32
Identity = 67/112 (59.82%), Postives = 86/112 (76.79%), Query Frame = 3
Query:  111 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDIVVTNKLARLRSQE 446
            R QSDR   V E+WR+P+GIDS VRR+F+G   MP IGYG++KKTR+ +PNG K F+V N  ++ELL+MHN+TY AEIA +VS RKR EIVE+A  L + VTN  A++RSQE
Sbjct:   16 RHQSDRFKRVGESWRKPRGIDSCVRRRFRGTISMPKIGYGNNKKTRYCMPNGLKAFLVRNVSDVELLLMHNKTYAAEIAGNVSARKRVEIVEKARALGVKVTNAGAKVRSQE 127          
BLAST of CK937529 vs. ExPASy Swiss-Prot
Match: RL32B_SCHPO (60S ribosomal protein L32-B OS=Schizosaccharomyces pombe GN=rpl32b PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.520e-31
Identity = 66/112 (58.93%), Postives = 85/112 (75.89%), Query Frame = 3
Query:  111 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDIVVTNKLARLRSQE 446
            R QSD    V E+WR+P+GIDS VRR+F+G   MP IGYG++KKTR+ +PNG K F+V N  ++ELL+MHN+TY AEIA +VS RKR EIVE+A  L + VTN  A++RSQE
Sbjct:   16 RHQSDLFKRVGESWRKPRGIDSCVRRRFRGTISMPKIGYGNNKKTRYCMPNGLKAFLVRNVSDVELLLMHNKTYAAEIASNVSARKRVEIVEKARALGVKVTNAGAKVRSQE 127          
BLAST of CK937529 vs. ExPASy Swiss-Prot
Match: RL32_DICDI (60S ribosomal protein L32 OS=Dictyostelium discoideum GN=rpl32 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 9.424e-29
Identity = 64/114 (56.14%), Postives = 82/114 (71.93%), Query Frame = 3
Query:  111 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDIVVTNKLARLRSQEDE 452
            R QSD    V  +WR+P+GID+RVRR+F G   MP+IG+GS K T+   P+GFK+FV+ N +ELE+L+M NR Y A I H VS + RK IVERAA+L+I VT   ARLRS+E E
Sbjct:   20 RFQSDLFKRVGASWRKPRGIDNRVRRRFSGSRAMPSIGFGSAKATKDVCPDGFKRFVIRNVQELEVLLMQNRRYAAVIFHGVSAKSRKAIVERAAELNIKVTTPNARLRSEERE 133          
BLAST of CK937529 vs. ExPASy Swiss-Prot
Match: RL32_CANAL (60S ribosomal protein L32 OS=Candida albicans GN=RPL32 PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 9.753e-26
Identity = 57/108 (52.78%), Postives = 77/108 (71.30%), Query Frame = 3
Query:  111 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDIVVTNKLARL 434
            R  SDR   V ENWR+ KGIDS VRR+F+G    PNIGYGS+KKT+   P G+K ++V N K+L++L++H ++Y AEIA  VS+RKR EIV +A +L + VTN   +L
Sbjct:   20 RHHSDRYHRVAENWRKQKGIDSCVRRRFRGTIPQPNIGYGSNKKTKFLNPAGYKVYLVKNVKDLDVLLLHTKSYAAEIASSVSSRKRVEIVAKAKKLGVKVTNPKGKL 127          
The following BLAST results are available for this feature:
BLAST of CK937529 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
RL32_DROMD1.550e-3968.4260S ribosomal protein L32 OS=Drosophila madeirensi... [more]
RL32_DROGU1.550e-3968.4260S ribosomal protein L32 OS=Drosophila guanche GN... [more]
RL32_DROBF1.550e-3968.4260S ribosomal protein L32 OS=Drosophila bifasciata... [more]
RL32_APIME2.644e-3970.1860S ribosomal protein L32 OS=Apis mellifera GN=RpL... [more]
RL32P_MOUSE1.358e-3564.04Putative 60S ribosomal protein L32' OS=Mus musculu... [more]
RL32_NEUCR2.831e-3359.4660S ribosomal protein L32 OS=Neurospora crassa GN=... [more]
RL32A_SCHPO9.107e-3259.8260S ribosomal protein L32-A OS=Schizosaccharomyces... [more]
RL32B_SCHPO4.520e-3158.9360S ribosomal protein L32-B OS=Schizosaccharomyces... [more]
RL32_DICDI9.424e-2956.1460S ribosomal protein L32 OS=Dictyostelium discoid... [more]
RL32_CANAL9.753e-2652.7860S ribosomal protein L32 OS=Candida albicans GN=R... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004779_F07 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0003_IIIF_F07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937529 ID=CK937529; Name=CK937529; organism=Citrus sinensis; type=EST; length=628bp
GGGGCTCGCGGCCAAGCTGAACCCTAGCTCAAATCACTGGGAAGAAGGTA
AGGAAGATGGCGGTTCCGTTACTGTCGAAGAAGATAGTGAAGAAGAGGCT
GAAGTTCAAGAGGCCTCAGAGCGATCGCAAGATCTCCGTCAAGGAAAATT
GGCGCAGACCAAAGGGTATTGATTCCCGGGTGCGAAGAAAGTTCAAGGGA
TGCACTCTAATGCCCAACATTGGTTATGGTTCGGACAAGAAGACACGCCA
CTATCTTCCAAATGGTTTCAAGAAATTTGTGGTGCACAATACGAAAGAGC
TTGAATTGTTGATGATGCACAACAGGACCTACTGTGCTGAAATTGCCCAT
GATGTTTCCACGAGGAAGAGGAAAGAGATTGTGGAGCGAGCTGCCCAACT
TGATATTGTTGTGACTAACAAGCTTGCTAGATTGAGAAGCCAGGAAGATG
AATGAGATTAAACAATCTGTTCTTTTTAGTAGTAGTGAGTCTTGTTTTGT
ACGCTTTATCAAAATTTTGAAAATTTTGACTTACAAAGATACGACCGTTT
GTGATTTTTTATTTTTTTGGGATGAGTGATAATACAGTAGTTTTTATTTC
ATAGAAAAAAAAAAAAAAAAAAAAAAAA
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