CK937529
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937529 vs. ExPASy Swiss-Prot
Match: RL32_PYRKO (50S ribosomal protein L32e OS=Pyrococcus kodakaraensis GN=rpl32e PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.254e-13 Identity = 41/90 (45.56%), Postives = 55/90 (61.11%), Query Frame = 3 Query: 150 WRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDIVVTN 419 WRRPKGIDS++R K KG P+IG+ S K R P+G+++ +VHN KELE + A IA V RKR+ I+ RA +L + V N Sbjct: 38 WRRPKGIDSKMRLKKKGKPRSPSIGWSSPKAVRGLHPSGYEEVLVHNVKELEAI--DPTRQAARIAGTVGARKREMILARAKELGVKVLN 125
BLAST of CK937529 vs. ExPASy Swiss-Prot
Match: RL32_THEON (50S ribosomal protein L32e OS=Thermococcus onnurineus (strain NA1) GN=rpl32e PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.250e-13 Identity = 40/90 (44.44%), Postives = 55/90 (61.11%), Query Frame = 3 Query: 150 WRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDIVVTN 419 WRRPKGIDS++R K KG P+IG+ S + R P+G+++ +VHN KELE + A IA V RKR+ I+ RA +L + V N Sbjct: 38 WRRPKGIDSKMRLKKKGKARSPSIGWSSPRLVRGLHPSGYEEVLVHNVKELEAI--DPARQAARIARTVGARKREMILARAKELGVKVLN 125
BLAST of CK937529 vs. ExPASy Swiss-Prot
Match: RL32_THESM (50S ribosomal protein L32e OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rpl32e PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.551e-13 Identity = 39/90 (43.33%), Postives = 57/90 (63.33%), Query Frame = 3 Query: 150 WRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDIVVTN 419 WR+PKG DS++R K KG P+IG+ S K R P+G+++ +V+N K+LEL+ ++ A IA V +KR I+ERA +L I V N Sbjct: 38 WRKPKGTDSKMRVKLKGKARSPSIGWSSPKAVRGLHPSGYEEVLVYNVKDLELI--DSKRQAARIAATVGKKKRIMIIERARELGIKVLN 125
BLAST of CK937529 vs. ExPASy Swiss-Prot
Match: RL32_MAIZE (60S ribosomal protein L32 (Fragment) OS=Zea mays GN=RPL32 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.598e-12 Identity = 36/42 (85.71%), Postives = 38/42 (90.48%), Query Frame = 3 Query: 327 TYCAEIAHDVSTRKRKEIVERAAQLDIVVTNKLARLRSQEDE 452 TYCAEIAH+VST+KRKEIVERAAQLDIVV KLAR SQEDE Sbjct: 1 TYCAEIAHNVSTKKRKEIVERAAQLDIVVPTKLARAPSQEDE 42
BLAST of CK937529 vs. ExPASy Swiss-Prot
Match: RL32_SULSO (50S ribosomal protein L32e OS=Sulfolobus solfataricus GN=rpl32e PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.978e-11 Identity = 35/106 (33.02%), Postives = 59/106 (55.66%), Query Frame = 3 Query: 111 RPQSDR--KISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDIVVTNK 422 R SD+ ++ +E WRRP G D++ R K +G + ++GY KK R + P+G ++ +VHN EL + I+ V +KR EI+ +A +L + V+N+ Sbjct: 29 RYDSDKFYRLGRQEKWRRPYGRDNKTRLKVRGFPAIVSVGYRLPKKVRGFHPSGLRQVIVHNVNELVKVQNQKDNVIVTISSSVGFKKRLEILNKARELGLKVSNE 134
BLAST of CK937529 vs. ExPASy Swiss-Prot
Match: RL32_SULIY (50S ribosomal protein L32e OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rpl32e PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.862e-11 Identity = 34/106 (32.08%), Postives = 60/106 (56.60%), Query Frame = 3 Query: 111 RPQSDR--KISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDIVVTNK 422 R SD+ ++ +E WRRP G D++ R K +G + ++GY K+ R + P+G ++ +VHN +L + + IA V +KR EI+ +A +L + V+N+ Sbjct: 29 RYDSDKFFRLGRQEKWRRPYGRDNKTRLKVRGFPAIVSVGYRLPKEVRGFHPSGLRQVIVHNVNDLVKVQNQKDSVIVTIASSVGFKKRLEILNKARELGLKVSNE 134
BLAST of CK937529 vs. ExPASy Swiss-Prot
Match: RL32_SULIN (50S ribosomal protein L32e OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rpl32e PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.862e-11 Identity = 34/106 (32.08%), Postives = 60/106 (56.60%), Query Frame = 3 Query: 111 RPQSDR--KISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDIVVTNK 422 R SD+ ++ +E WRRP G D++ R K +G + ++GY K+ R + P+G ++ +VHN +L + + IA V +KR EI+ +A +L + V+N+ Sbjct: 29 RYDSDKFFRLGRQEKWRRPYGRDNKTRLKVRGFPAIVSVGYRLPKEVRGFHPSGLRQVIVHNVNDLVKVQNQKDSVIVTIASSVGFKKRLEILNKARELGLKVSNE 134
BLAST of CK937529 vs. ExPASy Swiss-Prot
Match: RL32_SULIM (50S ribosomal protein L32e OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rpl32e PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.862e-11 Identity = 34/106 (32.08%), Postives = 60/106 (56.60%), Query Frame = 3 Query: 111 RPQSDR--KISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDIVVTNK 422 R SD+ ++ +E WRRP G D++ R K +G + ++GY K+ R + P+G ++ +VHN +L + + IA V +KR EI+ +A +L + V+N+ Sbjct: 29 RYDSDKFFRLGRQEKWRRPYGRDNKTRLKVRGFPAIVSVGYRLPKEVRGFHPSGLRQVIVHNVNDLVKVQNQKDSVIVTIASSVGFKKRLEILNKARELGLKVSNE 134
BLAST of CK937529 vs. ExPASy Swiss-Prot
Match: RL32_SULIL (50S ribosomal protein L32e OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rpl32e PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.862e-11 Identity = 34/106 (32.08%), Postives = 60/106 (56.60%), Query Frame = 3 Query: 111 RPQSDR--KISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDIVVTNK 422 R SD+ ++ +E WRRP G D++ R K +G + ++GY K+ R + P+G ++ +VHN +L + + IA V +KR EI+ +A +L + V+N+ Sbjct: 29 RYDSDKFFRLGRQEKWRRPYGRDNKTRLKVRGFPAIVSVGYRLPKEVRGFHPSGLRQVIVHNVNDLVKVQNQKDSVIVTIASSVGFKKRLEILNKARELGLKVSNE 134
BLAST of CK937529 vs. ExPASy Swiss-Prot
Match: RL32_SULIK (50S ribosomal protein L32e OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rpl32e PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.862e-11 Identity = 34/106 (32.08%), Postives = 60/106 (56.60%), Query Frame = 3 Query: 111 RPQSDR--KISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDIVVTNK 422 R SD+ ++ +E WRRP G D++ R K +G + ++GY K+ R + P+G ++ +VHN +L + + IA V +KR EI+ +A +L + V+N+ Sbjct: 29 RYDSDKFFRLGRQEKWRRPYGRDNKTRLKVRGFPAIVSVGYRLPKEVRGFHPSGLRQVIVHNVNDLVKVQNQKDSVIVTIASSVGFKKRLEILNKARELGLKVSNE 134 The following BLAST results are available for this feature:
BLAST of CK937529 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937529 ID=CK937529; Name=CK937529; organism=Citrus sinensis; type=EST; length=628bpback to top |