CK937528
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937528 vs. ExPASy Swiss-Prot
Match: UBCX_YEAST (Ubiquitin-conjugating enzyme E2-21 kDa OS=Saccharomyces cerevisiae GN=PEX4 PE=1 SV=1) HSP 1 Score: 50.8322 bits (120), Expect = 9.467e-12 Identity = 30/76 (39.47%), Postives = 39/76 (51.32%), Query Frame = 3 Query: 204 RILKE----LKDLQKDPPTSC-------SAGPVAE-DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVA 395 RI+KE LK L D P + S P+ E D+ W+A I GPSD+PY F + I P YP PPK++ Sbjct: 21 RIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPKIS 96 HSP 2 Score: 38.1206 bits (87), Expect = 9.467e-12 Identity = 23/67 (34.33%), Postives = 38/67 (56.72%), Query Frame = 2 Query: 383 PKGCF-RTKVFHPNINS-NGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK 574 PK F + + H N+ S G ICL+ILK E+W+P + + ++ LL +P D PL +I ++ + Sbjct: 93 PKISFMQNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCVHAVWRLLREPVCDSPLDVDIGNIIR 159
BLAST of CK937528 vs. ExPASy Swiss-Prot
Match: UBC32_ARATH (Ubiquitin carrier protein E2 32 OS=Arabidopsis thaliana GN=UBC32 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.023e-11 Identity = 34/85 (40.00%), Postives = 51/85 (60.00%), Query Frame = 3 Query: 195 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPK-VALGPRSSTRTSTAMEASV 446 A KRIL+E+K++Q +P + P+ E++F WQ I GP D+ + GG++ I P DYPFKPP + L P T+T + S+ Sbjct: 12 AVKRILQEVKEMQANPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPADYPFKPPSFMLLTPNGRFETNTKICLSI 96
BLAST of CK937528 vs. ExPASy Swiss-Prot
Match: UBC12_KLULA (NEDD8-conjugating enzyme UBC12 OS=Kluyveromyces lactis GN=UBC12 PE=3 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 1.596e-11 Identity = 24/65 (36.92%), Postives = 44/65 (67.69%), Query Frame = 2 Query: 404 KVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKVKYES 598 +++HPNI+ +G++CL++L+E W+PAL I +++ I L +PN DPL + A D +++E+ Sbjct: 99 RIYHPNIDIDGNVCLNLLREDWTPALDIQSIIIGILFLFHEPNGRDPLNKDAAKTLIEDPLRFEN 163 HSP 2 Score: 25.7942 bits (55), Expect = 1.596e-11 Identity = 10/28 (35.71%), Postives = 13/28 (46.43%), Query Frame = 3 Query: 309 PSDSPYAGGVFLVTIHFPPDYPFKPPKV 392 P YAGG + + YP +PP V Sbjct: 67 PDIGYYAGGTYYFNVFIKDTYPMEPPVV 94
BLAST of CK937528 vs. ExPASy Swiss-Prot
Match: UBE2W_MOUSE (Probable ubiquitin-conjugating enzyme E2 W OS=Mus musculus GN=Ube2w PE=2 SV=1) HSP 1 Score: 50.8322 bits (120), Expect = 1.608e-11 Identity = 22/37 (59.46%), Postives = 28/37 (75.68%), Query Frame = 2 Query: 413 HPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 523 HP++ SNG ICL IL E WSPAL++ V LSI S+L+ Sbjct: 81 HPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLS 117 HSP 2 Score: 37.3502 bits (85), Expect = 1.608e-11 Identity = 22/66 (33.33%), Postives = 29/66 (43.94%), Query Frame = 3 Query: 201 KRILKELKDLQKDPPTSCSAGP--VAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKV 392 KR+ KEL LQ DPP + V + W + G + Y G F + F YPF P+V Sbjct: 6 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQV 71
BLAST of CK937528 vs. ExPASy Swiss-Prot
Match: UBE2W_HUMAN (Probable ubiquitin-conjugating enzyme E2 W OS=Homo sapiens GN=UBE2W PE=1 SV=1) HSP 1 Score: 50.8322 bits (120), Expect = 1.608e-11 Identity = 22/37 (59.46%), Postives = 28/37 (75.68%), Query Frame = 2 Query: 413 HPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 523 HP++ SNG ICL IL E WSPAL++ V LSI S+L+ Sbjct: 81 HPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLS 117 HSP 2 Score: 37.3502 bits (85), Expect = 1.608e-11 Identity = 22/66 (33.33%), Postives = 29/66 (43.94%), Query Frame = 3 Query: 201 KRILKELKDLQKDPPTSCSAGP--VAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKV 392 KR+ KEL LQ DPP + V + W + G + Y G F + F YPF P+V Sbjct: 6 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQV 71
BLAST of CK937528 vs. ExPASy Swiss-Prot
Match: UBC6_KLULA (Ubiquitin-conjugating enzyme E2 6 OS=Kluyveromyces lactis GN=UBC6 PE=3 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 4.488e-11 Identity = 26/70 (37.14%), Postives = 40/70 (57.14%), Query Frame = 3 Query: 189 VMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAL 398 + A+KR+ KE K++ +PP A P +++ W I GP +PY G + T+ FP DYPF PP + + Sbjct: 4 IQANKRLTKEYKNIVNNPPPFIIAAPHEDNILEWHYVITGPPSTPYENGQYHGTLTFPSDYPFNPPAIRM 73 HSP 2 Score: 23.0978 bits (48), Expect = 4.488e-11 Identity = 13/45 (28.89%), Postives = 22/45 (48.89%), Query Frame = 2 Query: 404 KVFHPN--INSNGSICL---DILKEQWSPALTISKVLLSICSLLT 523 ++ PN N +CL D E W+PA ++ +L + S +T Sbjct: 72 RMITPNGRFKENTRLCLSMSDYHPEAWNPAWSVVTILNGLLSFMT 116 The following BLAST results are available for this feature:
BLAST of CK937528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 246
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937528 ID=CK937528; Name=CK937528; organism=Citrus sinensis; type=EST; length=712bpback to top |