CK937528
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937528 vs. ExPASy Swiss-Prot
Match: UBC2_CAEEL (Ubiquitin-conjugating enzyme E2 2 OS=Caenorhabditis elegans GN=let-70 PE=1 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.841e-63 Identity = 64/83 (77.11%), Postives = 72/83 (86.75%), Query Frame = 2
Query: 383 PKGCFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKVKYESTARSWTQKYAM 631
PK F T+++HPNINSNGSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLVPEIA +YK+D+ +Y AR WTQKYAM
Sbjct: 65 PKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQKYAM 147 HSP 2 Score: 119.783 bits (299), Expect = 3.841e-63 Identity = 53/72 (73.61%), Postives = 59/72 (81.94%), Query Frame = 3
Query: 192 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVALGPR 407
MA KRI KEL+DL +DPP CSAGPV +D+FHWQATIMGP +SPY GGVF +TIHFP DYPFKPPKVA R
Sbjct: 1 MALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTR 72
BLAST of CK937528 vs. ExPASy Swiss-Prot
Match: UB2D3_BOVIN (Ubiquitin-conjugating enzyme E2 D3 OS=Bos taurus GN=UBE2D3 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.008e-63 Identity = 63/83 (75.90%), Postives = 71/83 (85.54%), Query Frame = 2
Query: 383 PKGCFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKVKYESTARSWTQKYAM 631
PK F T+++HPNINSN SICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLVPEIA +YK+D+ KY +R WTQKYAM
Sbjct: 65 PKVAFTTRIYHPNINSNDSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYAM 147 HSP 2 Score: 122.865 bits (307), Expect = 5.008e-63 Identity = 55/72 (76.39%), Postives = 59/72 (81.94%), Query Frame = 3
Query: 192 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVALGPR 407
MA KRI KEL DL +DPP CSAGPV +DMFHWQATIMGP+DSPY GGVF +TIHFP DYPFKPPKVA R
Sbjct: 1 MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTR 72
BLAST of CK937528 vs. ExPASy Swiss-Prot
Match: UBC12_ARATH (Probable ubiquitin-conjugating enzyme E2 12 OS=Arabidopsis thaliana GN=UBC12 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 8.514e-63 Identity = 70/84 (83.33%), Postives = 76/84 (90.48%), Query Frame = 2
Query: 383 PKGCFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKVKYESTARSWTQKYAMG 634
PK F+TKV+HPNI+S GSICLDILKEQWSPA T SKVLLSICSLLTDPNP+DPLVPEIAH+YK DK KYESTA+ WTQKYAMG
Sbjct: 66 PKVNFKTKVYHPNIDSKGSICLDILKEQWSPAPTTSKVLLSICSLLTDPNPNDPLVPEIAHLYKVDKSKYESTAQKWTQKYAMG 149 HSP 2 Score: 111.309 bits (277), Expect = 8.514e-63 Identity = 51/68 (75.00%), Postives = 59/68 (86.76%), Query Frame = 3
Query: 192 MASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKV 392
MASKRI +EL+D+Q+ PP +CSAGPVAE D+FHWQATIMGP DSPY+GGVF V+I F DYPFKPPKV
Sbjct: 1 MASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDYPFKPPKV 68
BLAST of CK937528 vs. ExPASy Swiss-Prot
Match: U2D2B_RAT (Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norvegicus GN=Ube2d2b PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 7.751e-61 Identity = 64/83 (77.11%), Postives = 72/83 (86.75%), Query Frame = 2
Query: 383 PKGCFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKVKYESTARSWTQKYAM 631
PK F T+++HPN+NSNGSICLDIL+ QWSPALTISKVLLSI SLL DPNPDDPLVPEIA +YK+D+ KY TAR WTQKYAM
Sbjct: 65 PKVEFTTRIYHPNVNSNGSICLDILRSQWSPALTISKVLLSISSLLCDPNPDDPLVPEIAQIYKTDRDKYNRTAREWTQKYAM 147 HSP 2 Score: 115.161 bits (287), Expect = 7.751e-61 Identity = 52/72 (72.22%), Postives = 56/72 (77.78%), Query Frame = 3
Query: 192 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVALGPR 407
MA KRI KEL DL +DPP CSAGPV EDMFHWQATIMGP+DSPY GG F +TI FP +YPFKPPKV R
Sbjct: 1 MALKRIHKELNDLAQDPPAQCSAGPVGEDMFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPFKPPKVEFTTR 72
BLAST of CK937528 vs. ExPASy Swiss-Prot
Match: U2D2B_MOUSE (Ubiquitin-conjugating enzyme E2 D2B OS=Mus musculus GN=Ube2d2b PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 7.751e-61 Identity = 64/83 (77.11%), Postives = 72/83 (86.75%), Query Frame = 2
Query: 383 PKGCFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKVKYESTARSWTQKYAM 631
PK F T+++HPN+NSNGSICLDIL+ QWSPALTISKVLLSI SLL DPNPDDPLVPEIA +YK+D+ KY TAR WTQKYAM
Sbjct: 65 PKVEFTTRIYHPNVNSNGSICLDILRSQWSPALTISKVLLSISSLLCDPNPDDPLVPEIAQIYKTDRDKYNRTAREWTQKYAM 147 HSP 2 Score: 115.161 bits (287), Expect = 7.751e-61 Identity = 52/72 (72.22%), Postives = 56/72 (77.78%), Query Frame = 3
Query: 192 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVALGPR 407
MA KRI KEL DL +DPP CSAGPV EDMFHWQATIMGP+DSPY GG F +TI FP +YPFKPPKV R
Sbjct: 1 MALKRIHKELNDLAQDPPAQCSAGPVGEDMFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPFKPPKVEFTTR 72
BLAST of CK937528 vs. ExPASy Swiss-Prot
Match: UB2E2_MOUSE (Ubiquitin-conjugating enzyme E2 E2 OS=Mus musculus GN=Ube2e2 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.590e-45 Identity = 53/82 (64.63%), Postives = 65/82 (79.27%), Query Frame = 2
Query: 383 PKGCFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKVKYESTARSWTQKYA 628
PK FRT+++H NINS G ICLDILK+ WSPALTISKVLLSICSLLTD NP DPLV IA Y +++ +++ AR WT++YA
Sbjct: 119 PKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 200 HSP 2 Score: 88.5817 bits (218), Expect = 1.590e-45 Identity = 38/71 (53.52%), Postives = 51/71 (71.83%), Query Frame = 3
Query: 195 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVALGPR 407
++KRI KEL ++ DPP +CSAGP ++++ W++TI+GP S Y GGVF + I F PDYPFKPPKV R
Sbjct: 56 SAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTR 126
BLAST of CK937528 vs. ExPASy Swiss-Prot
Match: UB2E2_HUMAN (Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens GN=UBE2E2 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.590e-45 Identity = 53/82 (64.63%), Postives = 65/82 (79.27%), Query Frame = 2
Query: 383 PKGCFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKVKYESTARSWTQKYA 628
PK FRT+++H NINS G ICLDILK+ WSPALTISKVLLSICSLLTD NP DPLV IA Y +++ +++ AR WT++YA
Sbjct: 119 PKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 200 HSP 2 Score: 88.5817 bits (218), Expect = 1.590e-45 Identity = 38/71 (53.52%), Postives = 51/71 (71.83%), Query Frame = 3
Query: 195 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVALGPR 407
++KRI KEL ++ DPP +CSAGP ++++ W++TI+GP S Y GGVF + I F PDYPFKPPKV R
Sbjct: 56 SAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTR 126
BLAST of CK937528 vs. ExPASy Swiss-Prot
Match: UB2E1_MOUSE (Ubiquitin-conjugating enzyme E2 E1 OS=Mus musculus GN=Ube2e1 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.591e-45 Identity = 53/82 (64.63%), Postives = 65/82 (79.27%), Query Frame = 2
Query: 383 PKGCFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKVKYESTARSWTQKYA 628
PK FRT+++H NINS G ICLDILK+ WSPALTISKVLLSICSLLTD NP DPLV IA Y +++ +++ AR WT++YA
Sbjct: 111 PKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 192 HSP 2 Score: 88.5817 bits (218), Expect = 1.591e-45 Identity = 38/71 (53.52%), Postives = 51/71 (71.83%), Query Frame = 3
Query: 195 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVALGPR 407
++KRI KEL D+ DPP +CSAGP ++++ W++TI+GP S Y GGVF + I F P+YPFKPPKV R
Sbjct: 48 SAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTR 118
BLAST of CK937528 vs. ExPASy Swiss-Prot
Match: UB2E1_HUMAN (Ubiquitin-conjugating enzyme E2 E1 OS=Homo sapiens GN=UBE2E1 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.591e-45 Identity = 53/82 (64.63%), Postives = 65/82 (79.27%), Query Frame = 2
Query: 383 PKGCFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKVKYESTARSWTQKYA 628
PK FRT+++H NINS G ICLDILK+ WSPALTISKVLLSICSLLTD NP DPLV IA Y +++ +++ AR WT++YA
Sbjct: 111 PKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 192 HSP 2 Score: 88.5817 bits (218), Expect = 1.591e-45 Identity = 38/71 (53.52%), Postives = 51/71 (71.83%), Query Frame = 3
Query: 195 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVALGPR 407
++KRI KEL D+ DPP +CSAGP ++++ W++TI+GP S Y GGVF + I F P+YPFKPPKV R
Sbjct: 48 SAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTR 118
BLAST of CK937528 vs. ExPASy Swiss-Prot
Match: UBCD2_DROME (Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophila melanogaster GN=UbcD2 PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.696e-45 Identity = 53/82 (64.63%), Postives = 64/82 (78.05%), Query Frame = 2
Query: 383 PKGCFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKVKYESTARSWTQKYA 628
PK FRT+++H NINS G ICLDILK+ WSPALTISKVLLSICSLLTD NP DPLV IA Y ++ +++ AR WT++YA
Sbjct: 150 PKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLQNREEHDRIARLWTKRYA 231 HSP 2 Score: 90.1225 bits (222), Expect = 2.696e-45 Identity = 38/71 (53.52%), Postives = 51/71 (71.83%), Query Frame = 3
Query: 195 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVALGPR 407
++KRI KEL ++ DPP +CSAGP ++++ W +TI+GP S Y GGVF + IHF P+YPFKPPKV R
Sbjct: 87 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTR 157 The following BLAST results are available for this feature:
BLAST of CK937528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 246
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937528 ID=CK937528; Name=CK937528; organism=Citrus sinensis; type=EST; length=712bpback to top |