CK937528
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937528 vs. ExPASy Swiss-Prot
Match: UBC1_ARATH (Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana GN=UBC1 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.473e-29 Identity = 39/79 (49.37%), Postives = 50/79 (63.29%), Query Frame = 2
Query: 395 FRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKVKYESTAR-----SWT 616
F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P E A MY K +Y R SWT
Sbjct: 72 FVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQSWT 150 HSP 2 Score: 69.3218 bits (168), Expect = 1.473e-29 Identity = 29/66 (43.94%), Postives = 41/66 (62.12%), Query Frame = 3
Query: 195 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKV 392
A KR++++ K LQ+DPP S P ++ W A I GP D+P+ GG F +++ F DYP KPP V
Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTV 70
BLAST of CK937528 vs. ExPASy Swiss-Prot
Match: UBC13_SCHPO (Ubiquitin-conjugating enzyme E2 13 OS=Schizosaccharomyces pombe GN=ubc13 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.919e-29 Identity = 41/83 (49.40%), Postives = 58/83 (69.88%), Query Frame = 2
Query: 383 PKGCFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKVKYESTARSWTQKYAM 631
P F TK++HPN++ G ICL LK+ WSPAL I VLLSI +L+ PNPDDPL ++A ++K ++ + + AR WT+KYA+
Sbjct: 66 PNVRFLTKIYHPNVDKLGRICLSTLKKDWSPALQIRTVLLSIQALMGAPNPDDPLDNDVAKIWKENEPQAIANAREWTKKYAV 148 HSP 2 Score: 59.6918 bits (143), Expect = 1.919e-29 Identity = 25/64 (39.06%), Postives = 39/64 (60.94%), Query Frame = 3
Query: 201 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKV 392
KRI+KE++ L +DPP A P +++ +++ T+ GP S Y GG F + + P +YP PP V
Sbjct: 5 KRIIKEIETLTRDPPPGIVAAPTEDNLRYFKITMEGPQQSAYEGGKFHLELFLPDEYPMMPPNV 68
BLAST of CK937528 vs. ExPASy Swiss-Prot
Match: UBCD6_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=UbcD6 PE=2 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 2.498e-29 Identity = 34/76 (44.74%), Postives = 52/76 (68.42%), Query Frame = 2
Query: 395 FRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKVKYESTARSWTQK 622
F +KVFHPN+ ++G ICLDIL+ +WSP +S +L SI SLL+DPNP+ P A +YK ++ +YE ++ ++
Sbjct: 72 FVSKVFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLYKENRREYEKRVKACVEQ 147 HSP 2 Score: 69.3218 bits (168), Expect = 2.498e-29 Identity = 29/66 (43.94%), Postives = 41/66 (62.12%), Query Frame = 3
Query: 195 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKV 392
A +R++++ K LQ+DPPT S P ++ W A I GP D+P+ G F +TI F +YP KPP V
Sbjct: 5 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTV 70
BLAST of CK937528 vs. ExPASy Swiss-Prot
Match: UBC2_ARATH (Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.233e-29 Identity = 38/79 (48.10%), Postives = 51/79 (64.56%), Query Frame = 2
Query: 395 FRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKVKY-----ESTARSWT 616
F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P E A M+ K +Y E +SWT
Sbjct: 72 FVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSESKREYNRRVREVVEQSWT 150 HSP 2 Score: 69.3218 bits (168), Expect = 4.233e-29 Identity = 29/66 (43.94%), Postives = 41/66 (62.12%), Query Frame = 3
Query: 195 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKV 392
A KR++++ K LQ+DPP S P ++ W A I GP D+P+ GG F +++ F DYP KPP V
Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTV 70
BLAST of CK937528 vs. ExPASy Swiss-Prot
Match: UBC2_MEDSA (Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.511e-29 Identity = 38/79 (48.10%), Postives = 52/79 (65.82%), Query Frame = 2
Query: 395 FRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKVKY-----ESTARSWT 616
F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P E A M+ +K +Y E +SWT
Sbjct: 72 FVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREVVEQSWT 150 HSP 2 Score: 68.5514 bits (166), Expect = 5.511e-29 Identity = 29/66 (43.94%), Postives = 40/66 (60.61%), Query Frame = 3
Query: 195 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKV 392
A KR++++ K LQ DPP S P ++ W A I GP D+P+ GG F +++ F DYP KPP V
Sbjct: 5 ARKRLMRDFKRLQHDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTV 70
BLAST of CK937528 vs. ExPASy Swiss-Prot
Match: UBC2_TRIHA (Ubiquitin-conjugating enzyme E2 2 OS=Trichoderma harzianum GN=UBC2 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.005e-27 Identity = 35/82 (42.68%), Postives = 53/82 (64.63%), Query Frame = 2
Query: 383 PKGCFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKVKY-----ESTARSW 613
P+ F +++FHPN+ +NG +CLDIL+ +WSP ++ VL SI SLL DPN P E +++YK ++ +Y E+ RSW
Sbjct: 68 PQVKFISQMFHPNVYANGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPNTGSPANVEASNLYKDNRREYIKRVRETVERSW 149 HSP 2 Score: 68.1662 bits (165), Expect = 1.005e-27 Identity = 26/66 (39.39%), Postives = 43/66 (65.15%), Query Frame = 3
Query: 195 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKV 392
A +R++++ K +Q DPP SA P+ +++ W A I+GP+D+P+ G F + + F YP KPP+V
Sbjct: 5 ARRRLMRDFKRMQTDPPAGVSASPIPDNVMTWNAVIIGPADTPFEDGTFRLVMQFEEQYPNKPPQV 70
BLAST of CK937528 vs. ExPASy Swiss-Prot
Match: UBC2_ASPFU (Ubiquitin-conjugating enzyme E2 2 OS=Aspergillus fumigatus GN=ubc2 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.005e-27 Identity = 29/66 (43.94%), Postives = 44/66 (66.67%), Query Frame = 3
Query: 195 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKV 392
A +R++++ K +Q DPP SA PVA+++ W A I+GP+D+P+ G F + +HF YP KPP V
Sbjct: 5 ARRRLMRDFKRMQTDPPAGVSASPVADNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPGV 70 HSP 2 Score: 70.4774 bits (171), Expect = 1.005e-27 Identity = 31/78 (39.74%), Postives = 49/78 (62.82%), Query Frame = 2
Query: 395 FRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKVKY-----ESTARSW 613
F +++FHPN+ G +CLDIL+ +WSP ++ +L SI SLL DPN P E +++YK ++ +Y E+ +SW
Sbjct: 72 FISQMFHPNVYGTGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNTSSPANVEASNLYKDNRKEYIKRVRETVEKSW 149
BLAST of CK937528 vs. ExPASy Swiss-Prot
Match: UBC2_EMENI (Ubiquitin-conjugating enzyme E2 2 OS=Emericella nidulans GN=uvsJ PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.703e-27 Identity = 29/66 (43.94%), Postives = 44/66 (66.67%), Query Frame = 3
Query: 195 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKV 392
A +R++++ K +Q DPP SA PVA+++ W A I+GP+D+P+ G F + +HF YP KPP V
Sbjct: 5 ARRRLMRDFKRMQTDPPAGVSASPVADNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPGV 70 HSP 2 Score: 69.707 bits (169), Expect = 1.703e-27 Identity = 30/80 (37.50%), Postives = 50/80 (62.50%), Query Frame = 2
Query: 395 FRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKVKY-----ESTARSWTQ 619
F +++FHPN+ G +CLDIL+ +WSP ++ +L SI SLL DPN P E +++Y+ ++ +Y E+ +SW +
Sbjct: 72 FISQMFHPNVYGTGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNTSSPANVEASNLYRDNRKEYIKRVRETVEKSWEE 151
BLAST of CK937528 vs. ExPASy Swiss-Prot
Match: UBE2A_MOUSE (Ubiquitin-conjugating enzyme E2 A OS=Mus musculus GN=Ube2a PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 2.216e-27 Identity = 33/67 (49.25%), Postives = 49/67 (73.13%), Query Frame = 2
Query: 395 FRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKVKYE 595
F +K+FHPN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P + A +Y+ +K +YE
Sbjct: 72 FVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYE 138 HSP 2 Score: 64.6994 bits (156), Expect = 2.216e-27 Identity = 27/66 (40.91%), Postives = 39/66 (59.09%), Query Frame = 3
Query: 195 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKV 392
A +R++++ K LQ+DPP S P ++ W A I GP +P+ G F +TI F +YP KPP V
Sbjct: 5 ARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTV 70
BLAST of CK937528 vs. ExPASy Swiss-Prot
Match: UBE2A_HUMAN (Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens GN=UBE2A PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 2.216e-27 Identity = 33/67 (49.25%), Postives = 49/67 (73.13%), Query Frame = 2
Query: 395 FRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKVKYE 595
F +K+FHPN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P + A +Y+ +K +YE
Sbjct: 72 FVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYE 138 HSP 2 Score: 64.6994 bits (156), Expect = 2.216e-27 Identity = 27/66 (40.91%), Postives = 39/66 (59.09%), Query Frame = 3
Query: 195 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKV 392
A +R++++ K LQ+DPP S P ++ W A I GP +P+ G F +TI F +YP KPP V
Sbjct: 5 ARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTV 70 The following BLAST results are available for this feature:
BLAST of CK937528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 246
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937528 ID=CK937528; Name=CK937528; organism=Citrus sinensis; type=EST; length=712bpback to top |