CK937524

Overview
NameCK937524
Unique NameCK937524
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length616
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937524 vs. ExPASy Swiss-Prot
Match: GL19_ARATH (Putative germin-like protein subfamily 1 member 9 OS=Arabidopsis thaliana GN=At5g38910 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.469e-50
Identity = 101/185 (54.59%), Postives = 119/185 (64.32%), Query Frame = 1
Query:   61 MKVIQFLIGFXXXXXXXXXXXXTDPGHLQNVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISTFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKDLNKGDVFVFPQGXIHFQFNIGKTNAAAYSALNSQFPGEVT 615
            MK   FL               +DP  LQ+ CV +N P DGVFVNGKFCKDPKL   EDFFF+GL +      + G + T  NV  +PGLNTLGIS  RIDY  YGQ PPH HPRASE+  V  GTL+VGFVTS+   N L +K L +GDVFVFPQG IHFQ N+GK  A A++ L+SQ PG +T
Sbjct:    1 MKSFSFLAVLSILAITLSLSKASDPSSLQDFCVGVNTPADGVFVNGKFCKDPKLVTVEDFFFTGLHEARPPNPKTGSNVTAVNVNNLPGLNTLGISLVRIDYGVYGQNPPHTHPRASEVLYVAVGTLFVGFVTSNP-ENRLFSKTLYEGDVFVFPQGLIHFQVNVGKYPAVAFAGLSSQNPGVIT 184          
BLAST of CK937524 vs. ExPASy Swiss-Prot
Match: GLP1_MESCR (Germin-like protein OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.225e-50
Identity = 97/165 (58.79%), Postives = 112/165 (67.88%), Query Frame = 1
Query:  127 TDPGHLQNVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISTFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLN--NTLIAKDLNKGDVFVFPQGXIHFQFNIGKTNAAAYSALNSQFPGEVT 615
            TDP  LQ+ CV +N P DG+FVNG FCKDP     +DF F GL  P NT N LG   T      +PGLNTLGIS  R+D+AP+G  PPH HPRA+E+F+VLEGT YVGFVTS+  +  N L AK LNKGDVFVFPQG IHFQ NIG       S L+SQ PG +T
Sbjct:   23 TDPTQLQDFCVGVNKPNDGLFVNGLFCKDPMEVNPDDFLFRGLNMPANTDNALGFAATLVTAANLPGLNTLGISVARLDFAPHGLNPPHTHPRATEVFVVLEGTFYVGFVTSNLADGGNKLFAKVLNKGDVFVFPQGLIHFQLNIGNYPGVGISGLSSQNPGVIT 187          
BLAST of CK937524 vs. ExPASy Swiss-Prot
Match: GL21_ORYSJ (Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica GN=Os02g0491600 PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 7.943e-49
Identity = 101/163 (61.96%), Postives = 113/163 (69.33%), Query Frame = 1
Query:  127 TDPGHLQNVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISTFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKDLNKGDVFVFPQGXIHFQFNIGKTNAAAYSALNSQFPGEVT 615
            +DP  LQ+ CVA  D    V VNG  CKDP     EDFFFSGL   GNT+NR G   T  NV QI GLNTLGIS  R+DYAPYG  PPHIHPRA+EI  +LEG+LYVGFVTS+   N L  K LNKGDVFVFPQG IHFQFN G  +  A +AL+SQ PG +T
Sbjct:   22 SDPSQLQDFCVA--DKMSQVLVNGFACKDPAAITVEDFFFSGLHMAGNTSNRQGSAVTGVNVAQISGLNTLGISLARVDYAPYGLNPPHIHPRATEILTILEGSLYVGFVTSNP-ENKLFTKVLNKGDVFVFPQGLIHFQFNYGTKDVIALAALSSQNPGVIT 181          
BLAST of CK937524 vs. ExPASy Swiss-Prot
Match: GL12_ARATH (Putative germin-like protein subfamily 1 member 2 OS=Arabidopsis thaliana GN=At3g04150 PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.037e-48
Identity = 97/161 (60.25%), Postives = 115/161 (71.43%), Query Frame = 1
Query:  130 DPGHLQNVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISTFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKDLNKGDVFVFPQGXIHFQFNIGKTNAAAYSALNSQFPGEV 612
            DP  LQ+ CVA N   + VFVNGKFCKDPKL  A DFF+SGL  PGNT+NRLG   TD +V +IPGLNTLGI+  R+D+AP GQ PPHIHPRAS+I LVL+G L VGFV+S+  N TL +K L  GDVF FP G + F  N GKT+A A   + SQ PG +
Sbjct:   26 DPNPLQDYCVATNGT-NRVFVNGKFCKDPKLVTANDFFYSGLNIPGNTSNRLGASVTDVDVRRIPGLNTLGIAIARLDFAPGGQLPPHIHPRASQIILVLKGQLSVGFVSSNDYNYTLFSKILYPGDVFAFPIGLVQFHANTGKTHAVAIGVVGSQDPGVI 185          
BLAST of CK937524 vs. ExPASy Swiss-Prot
Match: GL112_ARATH (Putative germin-like protein subfamily 1 member 12 OS=Arabidopsis thaliana GN=At5g38960 PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.037e-48
Identity = 97/163 (59.51%), Postives = 118/163 (72.39%), Query Frame = 1
Query:  127 TDPGHLQNVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNT-ANRLGVDETDANVEQIPGLNTLGISTFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKDLNKGDVFVFPQGXIHFQFNIGKTNAAAYSALNSQFPGEV 612
            +DP  LQ+ C+ +N P + +FVNGKFCKDPKL  A+DF+FSGL K   T ++ +G + T  NV QIPGLNTLGIS  RIDY   GQ PPH HPRA+EI LV EGTL+VGF +S    N L  K LNKGDVFVFP+G IHFQ NIGK  A A+++L+SQ PG +
Sbjct:   25 SDPSPLQDFCIGVNTPANALFVNGKFCKDPKLVTADDFYFSGLDKARTTESSPVGSNVTTVNVNQIPGLNTLGISLVRIDYGINGQNPPHTHPRATEILLVQEGTLFVGFFSSFP-ENRLFNKTLNKGDVFVFPEGLIHFQVNIGKQPAVAFASLSSQNPGVI 186          
BLAST of CK937524 vs. ExPASy Swiss-Prot
Match: GL111_ARATH (Germin-like protein subfamily 1 member 11 OS=Arabidopsis thaliana GN=At5g38940 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.769e-48
Identity = 101/187 (54.01%), Postives = 123/187 (65.78%), Query Frame = 1
Query:   55 ITMKVIQFLIGFXXXXXXXXXXXXTDPGHLQNVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISTFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKDLNKGDVFVFPQGXIHFQFNIGKTNAAAYSALNSQFPGEVT 615
            + MK + FL               +DP  LQ+ CV+ N   +GVFVNGKFCKDPKL  A+DFFFSGL       + +G   T  NV  + GLNTLGIS  RIDYA  GQ PPH HPRA+EI +V +GTL VGFVTS+  +N L +K LN+GDVFVFP+G IHFQ NIGK  A A++AL+SQ PG +T
Sbjct:    1 MAMKSLSFLAVLSLLALTLPLAIASDPSQLQDFCVSANTSANGVFVNGKFCKDPKLVTADDFFFSGLQTARPITSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVNGQNPPHTHPRATEILVVEQGTLLVGFVTSNP-DNRLFSKVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNPGVIT 186          
BLAST of CK937524 vs. ExPASy Swiss-Prot
Match: GL110_ARATH (Germin-like protein subfamily 1 member 10 OS=Arabidopsis thaliana GN=At5g38930 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.498e-47
Identity = 100/187 (53.48%), Postives = 120/187 (64.17%), Query Frame = 1
Query:   55 ITMKVIQFLIGFXXXXXXXXXXXXTDPGHLQNVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISTFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKDLNKGDVFVFPQGXIHFQFNIGKTNAAAYSALNSQFPGEVT 615
            + MK + FL               +DP  LQ+ CV+ N   +GVFVNGKFCKDPKL  A+DFFF GL       + +G   T  NV  + GLNTLGIS  RIDYA  GQ PPH HPRA+EI +V  GTL VGFVTS+  +N L  K LN+GDVFVFP+G IHFQ NIGK  A A++AL+SQ PG +T
Sbjct:    1 MAMKSLSFLAALSLLALTLPLTIASDPSQLQDFCVSANSSANGVFVNGKFCKDPKLVTADDFFFPGLQTARPITSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVDGQNPPHTHPRATEILVVELGTLLVGFVTSNP-DNRLFTKVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNPGVIT 186          
BLAST of CK937524 vs. ExPASy Swiss-Prot
Match: GL23_ORYSJ (Putative germin-like protein 2-3 OS=Oryza sativa subsp. japonica GN=Os02g0491800 PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.956e-47
Identity = 99/163 (60.74%), Postives = 115/163 (70.55%), Query Frame = 1
Query:  127 TDPGHLQNVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISTFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKDLNKGDVFVFPQGXIHFQFNIGKTNAAAYSALNSQFPGEVT 615
            +DP HLQ++CVA  D    V VNG  CKD +   AEDFFFSGL   GNT N+ G   T  NV Q+PGLNTLGIS  RIDYA +G  PPH HPRA+EI  VLEG+LYVGFVTS+   N L  K +NKGDVFVFP+G +HFQFN G T+A A  AL+SQ PG +T
Sbjct:   29 SDPSHLQDLCVA--DKASTVRVNGVACKDGEDVAAEDFFFSGLHMAGNTTNKQGSAVTAVNVAQVPGLNTLGISLARIDYALHGLNPPHTHPRATEILTVLEGSLYVGFVTSNP-ENKLFTKVINKGDVFVFPKGLVHFQFNYGTTDAVAIVALSSQNPGVIT 188          
BLAST of CK937524 vs. ExPASy Swiss-Prot
Match: GL15_ARATH (Germin-like protein subfamily 1 member 5 OS=Arabidopsis thaliana GN=At3g04190 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.163e-46
Identity = 92/161 (57.14%), Postives = 114/161 (70.81%), Query Frame = 1
Query:  130 DPGHLQNVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISTFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKDLNKGDVFVFPQGXIHFQFNIGKTNAAAYSALNSQFPGEV 612
            +P  LQ+ CVA N+  +GV+VNGKFCKDPK   A DF+ SGL  PGNT+   GV  T  +V+++PGLNTLG+   RID+AP G  PPH HPR SEIFLV++G L+VGFV+S++ N TL  K L  GDVFVFP+G I F  NIGKTNA   +A  SQ PG +
Sbjct:   26 EPSPLQDYCVATNET-NGVYVNGKFCKDPKCVTANDFYTSGLNVPGNTSTGPGVKITVVDVKRMPGLNTLGVDIARIDFAPGGLYPPHTHPRGSEIFLVMKGKLFVGFVSSNEYNYTLFTKVLYPGDVFVFPKGLIQFHANIGKTNAVVIAATGSQNPGRI 185          
BLAST of CK937524 vs. ExPASy Swiss-Prot
Match: GL22_ORYSJ (Putative germin-like protein 2-2 OS=Oryza sativa subsp. japonica GN=Os02g0491700 PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 4.819e-46
Identity = 99/163 (60.74%), Postives = 112/163 (68.71%), Query Frame = 1
Query:  127 TDPGHLQNVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISTFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKDLNKGDVFVFPQGXIHFQFNIGKTNAAAYSALNSQFPGEVT 615
            +DPG LQ+ CV   D    V VNG  CKD K   A DFFFSGL   GNT N+ G + T  NV QIPGLNT+G+S  RIDYAP G  PPH HPRA+EI  VLEG+LYVGFV S+   N L  K LNKGDVFVFPQG +HFQFN G  NA A +AL+SQ PG +T
Sbjct:   29 SDPGLLQDFCVV--DKMSQVRVNGFPCKDAKDVVAGDFFFSGLHMAGNTTNKQGSNVTTVNVAQIPGLNTMGVSLVRIDYAPNGLNPPHTHPRATEIPTVLEGSLYVGFVISNP-ENKLFTKVLNKGDVFVFPQGLVHFQFNNGTNNAVALAALSSQNPGVIT 188          
The following BLAST results are available for this feature:
BLAST of CK937524 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL19_ARATH2.469e-5054.59Putative germin-like protein subfamily 1 member 9 ... [more]
GLP1_MESCR3.225e-5058.79Germin-like protein OS=Mesembryanthemum crystallin... [more]
GL21_ORYSJ7.943e-4961.96Putative germin-like protein 2-1 OS=Oryza sativa s... [more]
GL12_ARATH1.037e-4860.25Putative germin-like protein subfamily 1 member 2 ... [more]
GL112_ARATH1.037e-4859.51Putative germin-like protein subfamily 1 member 12... [more]
GL111_ARATH1.769e-4854.01Germin-like protein subfamily 1 member 11 OS=Arabi... [more]
GL110_ARATH1.498e-4753.48Germin-like protein subfamily 1 member 10 OS=Arabi... [more]
GL23_ORYSJ1.956e-4760.74Putative germin-like protein 2-3 OS=Oryza sativa s... [more]
GL15_ARATH2.163e-4657.14Germin-like protein subfamily 1 member 5 OS=Arabid... [more]
GL22_ORYSJ4.819e-4660.74Putative germin-like protein 2-2 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004779_E11 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0003_IIIF_E11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937524 ID=CK937524; Name=CK937524; organism=Citrus sinensis; type=EST; length=616bp
GGGGGAAATCACAACACTTGATTAAAGTTTGAGATAGGCACATCCTGTGA
CTTAATCACCATGAAGGTAATTCAATTTCTTATAGGTTTTGCCCTCTTGG
CTTTGGCTTCTTCTTTGGCCTCTGCCACTGACCCTGGACATCTTCAAAAT
GTCTGTGTAGCCATCAATGACCCCAAGGATGGTGTGTTTGTGAATGGGAA
GTTCTGCAAGGACCCCAAGCTTGCGAGAGCAGAAGATTTCTTCTTCTCAG
GGCTAGGCAAGCCTGGAAACACAGCAAATCGACTTGGTGTTGATGAAACA
GATGCAAATGTTGAGCAAATTCCAGGACTCAACACCCTTGGCATATCAAC
ATTCCGTATTGACTATGCACCATATGGCCAAAGGCCACCTCACATTCACC
CCCGTGCCAGCGAAATCTTCTTAGTCCTGGAAGGAACTCTTTATGTCGGT
TTTGTGACATCAGACCAACTGAATAACACACTCATCGCAAAAGATCTAAA
TAAGGGAGATGTTTTTGTGTTTCCACAAGGNNNNATTCACTTCCAATTCA
ACATTGGAAAAACAAATGCAGCTGCCTATTCTGCTCTAAACAGCCAATTC
CCGGGTGAAGTTACCA
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