CK937524

Overview
NameCK937524
Unique NameCK937524
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length616
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937524 vs. ExPASy Swiss-Prot
Match: GL81_ORYSJ (Putative germin-like protein 8-1 OS=Oryza sativa subsp. japonica GN=Os08g0188900 PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 4.667e-41
Identity = 96/165 (58.18%), Postives = 116/165 (70.30%), Query Frame = 1
Query:  130 DPGHLQNVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGNTA-NRLGVDETDANVEQIPGLNTLGISTFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKDLNKGDVFVFPQGXIHFQFNIGKTN-AAAYSALNSQFPGEVT 615
            +P  LQ+ CVA  D    V VNG  CK+P    A+DFF +  L KP +TA N++G + T  NV +IPGLNTLGIS  R+DYAP G  PPH HPRA+EIF VLEGTLYVGFVTS+  +N L +K LNKGDVFVFP+G IHFQFN+     A A SA++SQ PG +T
Sbjct:   25 EPSPLQDFCVA--DLNSAVRVNGFACKNPTNVSADDFFKAAMLDKPRDTAVNKVGSNITLINVMEIPGLNTLGISIVRVDYAPLGLNPPHTHPRATEIFTVLEGTLYVGFVTSNP-DNKLFSKVLNKGDVFVFPKGLIHFQFNLDPHKPAIATSAISSQNPGIIT 186          
BLAST of CK937524 vs. ExPASy Swiss-Prot
Match: GL85_ORYSJ (Germin-like protein 8-5 OS=Oryza sativa subsp. japonica GN=Os08g0189400 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 6.096e-41
Identity = 95/164 (57.93%), Postives = 109/164 (66.46%), Query Frame = 1
Query:  127 TDPGHLQNVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISTFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKDLNKGDVFVFPQGXIHFQFNIGKTN-AAAYSALNSQFPGEVT 615
            +DP  LQ+ CVA  D    V VNG  C +P    A+ FF +         N++G + T  NV QIPGLNTLGIS  RIDYAP GQ PPH HPRA+EI  VLEGTLYVGFVTS+  NNTL +K LNKGDVFVFPQG IHFQFN      A A +AL+SQ PG +T
Sbjct:   23 SDPSPLQDFCVA--DMHSPVRVNGFACLNPMEVNADHFFKAAKLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLYVGFVTSNP-NNTLFSKVLNKGDVFVFPQGLIHFQFNPNPHQPAVAIAALSSQNPGAIT 183          
BLAST of CK937524 vs. ExPASy Swiss-Prot
Match: GL122_ORYSJ (Germin-like protein 12-2 OS=Oryza sativa subsp. japonica GN=Os12g0154800 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.040e-40
Identity = 97/168 (57.74%), Postives = 112/168 (66.67%), Query Frame = 1
Query:  127 TDPGHLQNVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGNTA-NRLGVDETDANVEQIPGLNTLGISTFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLN--NTLIAKDLNKGDVFVFPQGXIHFQFNIGKTN-AAAYSALNSQFPGEVT 615
            +DP  LQ+ CVA  D    V VNG  CKD K    +DFF +  L KP +T  ++ G + T  NV ++ GLNTLGIS  RIDYAP GQ PPH HPRA+EI  VLEGTLYVGFVTS+Q N  N L  K LNKGDVFVFPQG IHFQFN      A A +AL+SQ PG +T
Sbjct:   23 SDPSPLQDFCVA--DRNSPVHVNGFPCKDAKDVNVDDFFLAANLDKPMDTTKSKAGSNVTLINVMKLAGLNTLGISMARIDYAPKGQNPPHTHPRATEILTVLEGTLYVGFVTSNQANGENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDKPAVAIAALSSQNPGAIT 188          
BLAST of CK937524 vs. ExPASy Swiss-Prot
Match: GL25_ARATH (Probable germin-like protein subfamily 2 member 5 OS=Arabidopsis thaliana GN=At5g26700 PE=2 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 3.025e-40
Identity = 89/155 (57.42%), Postives = 103/155 (66.45%), Query Frame = 1
Query:  142 LQNVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISTFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKDLNKGDVFVFPQGXIHFQFNIGKTNAAAYSALNSQFPG 606
            LQ+VCVA  D  + V VNG  CKD      EDF+F GL     T    G   T ANVE++PGLNTLG+S  RIDYAP G  PPH+HPRASEI  VLEG LYVGFVT+      LIAK+LNKGDVF FP+G IHFQ NI  + A+  +A +SQ PG
Sbjct:   25 LQDVCVA--DLSNAVKVNGYTCKDSTQITPEDFYFKGLANIAATNTSTGSVVTGANVEKLPGLNTLGLSMSRIDYAPNGLNPPHVHPRASEIIFVLEGQLYVGFVTT---AGKLIAKNLNKGDVFTFPKGLIHFQKNIANSPASVLAAFDSQLPG 174          
BLAST of CK937524 vs. ExPASy Swiss-Prot
Match: GL21_ARATH (Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana GN=GLP4 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 6.740e-40
Identity = 87/159 (54.72%), Postives = 103/159 (64.78%), Query Frame = 1
Query:  130 DPGHLQNVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISTFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKDLNKGDVFVFPQGXIHFQFNIGKTNAAAYSALNSQFPG 606
            DP  LQ++CVA  D   G+ +NG  CKD     + DFF  GL KPG T N  G   T ANV  IPGLNTLG+S  RIDYAP G  PPH HPRA+E+  VLEGTL VGF+T+    N LI++ L KGDVF FP+G +HFQ N G   A+  +A NSQ PG
Sbjct:   24 DPDMLQDLCVA--DLPSGIKINGFPCKDAATVTSADFFSQGLAKPGLTNNTFGALVTGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVFVLEGTLDVGFLTT---ANKLISQSLKKGDVFAFPKGLVHFQKNNGDVPASVIAAFNSQLPG 177          
BLAST of CK937524 vs. ExPASy Swiss-Prot
Match: GL121_ORYSJ (Germin-like protein 12-1 OS=Oryza sativa subsp. japonica GN=Os12g0154700 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 6.740e-40
Identity = 96/167 (57.49%), Postives = 110/167 (65.87%), Query Frame = 1
Query:  130 DPGHLQNVCVAINDPKDGVFVNGKFCKDPKLARAEDFFF-SGLGKPGNTA-NRLGVDETDANVEQIPGLNTLGISTFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLN--NTLIAKDLNKGDVFVFPQGXIHFQFNIGKTN-AAAYSALNSQFPGEVT 615
            DP  LQ+ CVA  D    V VNG  CKD K    +DFF  + L KP +T  ++ G + T  NV ++ GLNTLGIS  RIDYAP GQ PPH HPRA+EI  V EGTLYVGFVTS+Q N  N L  K LNKGDVFVFPQG IHFQFN      A A +AL+SQ PG +T
Sbjct:   24 DPSPLQDFCVA--DRNSPVRVNGFPCKDAKDVNVDDFFLEANLDKPMDTTKSKAGSNVTLINVMKLTGLNTLGISMARIDYAPKGQNPPHTHPRATEILTVFEGTLYVGFVTSNQANGENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDKPAVAIAALSSQNPGAIT 188          
BLAST of CK937524 vs. ExPASy Swiss-Prot
Match: GL811_ORYSJ (Germin-like protein 8-11 OS=Oryza sativa subsp. japonica GN=Os08g0190100 PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 8.802e-40
Identity = 92/164 (56.10%), Postives = 108/164 (65.85%), Query Frame = 1
Query:  127 TDPGHLQNVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISTFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKDLNKGDVFVFPQGXIHFQFNIGKTN-AAAYSALNSQFPGEVT 615
            +DP  LQ+ CVA  D    V VNG  C +PK   A+ FF + +       N++G + T  NV QIPGLNTLGIS  RIDYAP GQ PPH HPRA+EI  VLEGTLYVGFVTS+  +N   +K LNKGDVFVFP G IHFQFN      A A +AL+SQ PG +T
Sbjct:   23 SDPSPLQDFCVA--DMHSPVLVNGFACLNPKDVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLYVGFVTSNP-DNKFFSKVLNKGDVFVFPVGLIHFQFNPNPYKPAVAIAALSSQNPGAIT 183          
BLAST of CK937524 vs. ExPASy Swiss-Prot
Match: GL812_ORYSJ (Germin-like protein 8-12 OS=Oryza sativa subsp. japonica GN=Os08g0231400 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.501e-39
Identity = 95/182 (52.20%), Postives = 113/182 (62.09%), Query Frame = 1
Query:   76 FLIGFXXXXXXXXXXXXTDPGHLQNVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGNTANRLGVDETDANVEQIPGLNTLGISTFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKDLNKGDVFVFPQGXIHFQFNIGKTN-AAAYSALNSQFPGEVT 615
            FL+G              DP  LQ+ CVA  D    V VNG  CK+P    +EDFF +     P NT N+LG + T+ NV + PGLNTLGIS  RIDYAP G  PPHIHPRA+E+  VLEGTLYVGFVTS+   N L +K + KGDVFVFP+  IHFQ N+     A A SAL+SQ PG +T
Sbjct:    7 FLLGALLVLASWQAIVAYDPSPLQDFCVA--DMNSPVRVNGFACKNPMDVSSEDFFNAAKFDMPRNTFNKLGSNVTNLNVMEFPGLNTLGISLARIDYAPMGVNPPHIHPRATELLTVLEGTLYVGFVTSNP--NKLFSKVVCKGDVFVFPKAMIHFQMNLDHDKPAVAQSALSSQNPGVIT 184          
BLAST of CK937524 vs. ExPASy Swiss-Prot
Match: GL123_ORYSJ (Putative germin-like protein 12-3 OS=Oryza sativa subsp. japonica GN=Os12g0154900 PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.501e-39
Identity = 95/168 (56.55%), Postives = 113/168 (67.26%), Query Frame = 1
Query:  127 TDPGHLQNVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGN-TANRLGVDETDANVEQIPGLNTLGISTFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLN--NTLIAKDLNKGDVFVFPQGXIHFQFNIGKTN-AAAYSALNSQFPGEVT 615
            +DP  LQ++CVA  D    V VNG  CKD K    +DFF +  L KP + T ++ G + T  NV ++ GLNTLGIS  RIDYAP GQ PPH HPRA+EI  V+EG+LYVGFVTS+Q N  N L  K LNKGDVFVFP+G IHFQFN      AAA  AL+SQ PG +T
Sbjct:   23 SDPSPLQDLCVA--DKNSPVRVNGFPCKDAKDVSVDDFFLAANLDKPMDITKSKAGSNVTLINVMKLAGLNTLGISMARIDYAPKGQNPPHTHPRATEILSVIEGSLYVGFVTSNQANGENKLFTKTLNKGDVFVFPEGLIHFQFNPSYDKPAAAIVALSSQNPGAIT 188          
BLAST of CK937524 vs. ExPASy Swiss-Prot
Match: GL124_ORYSJ (Putative germin-like protein 12-4 OS=Oryza sativa subsp. japonica GN=Os12g0155000 PE=3 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 2.561e-39
Identity = 95/168 (56.55%), Postives = 111/168 (66.07%), Query Frame = 1
Query:  127 TDPGHLQNVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGNTA-NRLGVDETDANVEQIPGLNTLGISTFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLN--NTLIAKDLNKGDVFVFPQGXIHFQFNIGKTN-AAAYSALNSQFPGEVT 615
            +DP  LQ+ CVA  D    V VNG  CKD K    +DFF +  L KP +T  ++ G + T  NV ++ GLNTL IS  RIDYAP GQ PPH HPRA+EI  VLEG+LYVGFVTS+Q N  N L  K LNKGDVFVFPQG IHFQFN      A A +AL+SQ PG +T
Sbjct:   23 SDPSPLQDFCVA--DKHSPVRVNGLPCKDAKDVSVDDFFLAANLDKPMDTTKSKAGSNVTLINVMKLAGLNTLSISMARIDYAPKGQNPPHTHPRATEILTVLEGSLYVGFVTSNQANRENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDKPAVAIAALSSQNPGAIT 188          
The following BLAST results are available for this feature:
BLAST of CK937524 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL81_ORYSJ4.667e-4158.18Putative germin-like protein 8-1 OS=Oryza sativa s... [more]
GL85_ORYSJ6.096e-4157.93Germin-like protein 8-5 OS=Oryza sativa subsp. jap... [more]
GL122_ORYSJ1.040e-4057.74Germin-like protein 12-2 OS=Oryza sativa subsp. ja... [more]
GL25_ARATH3.025e-4057.42Probable germin-like protein subfamily 2 member 5 ... [more]
GL21_ARATH6.740e-4054.72Germin-like protein subfamily 2 member 1 OS=Arabid... [more]
GL121_ORYSJ6.740e-4057.49Germin-like protein 12-1 OS=Oryza sativa subsp. ja... [more]
GL811_ORYSJ8.802e-4056.10Germin-like protein 8-11 OS=Oryza sativa subsp. ja... [more]
GL812_ORYSJ1.501e-3952.20Germin-like protein 8-12 OS=Oryza sativa subsp. ja... [more]
GL123_ORYSJ1.501e-3956.55Putative germin-like protein 12-3 OS=Oryza sativa ... [more]
GL124_ORYSJ2.561e-3956.55Putative germin-like protein 12-4 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004779_E11 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0003_IIIF_E11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937524 ID=CK937524; Name=CK937524; organism=Citrus sinensis; type=EST; length=616bp
GGGGGAAATCACAACACTTGATTAAAGTTTGAGATAGGCACATCCTGTGA
CTTAATCACCATGAAGGTAATTCAATTTCTTATAGGTTTTGCCCTCTTGG
CTTTGGCTTCTTCTTTGGCCTCTGCCACTGACCCTGGACATCTTCAAAAT
GTCTGTGTAGCCATCAATGACCCCAAGGATGGTGTGTTTGTGAATGGGAA
GTTCTGCAAGGACCCCAAGCTTGCGAGAGCAGAAGATTTCTTCTTCTCAG
GGCTAGGCAAGCCTGGAAACACAGCAAATCGACTTGGTGTTGATGAAACA
GATGCAAATGTTGAGCAAATTCCAGGACTCAACACCCTTGGCATATCAAC
ATTCCGTATTGACTATGCACCATATGGCCAAAGGCCACCTCACATTCACC
CCCGTGCCAGCGAAATCTTCTTAGTCCTGGAAGGAACTCTTTATGTCGGT
TTTGTGACATCAGACCAACTGAATAACACACTCATCGCAAAAGATCTAAA
TAAGGGAGATGTTTTTGTGTTTCCACAAGGNNNNATTCACTTCCAATTCA
ACATTGGAAAAACAAATGCAGCTGCCTATTCTGCTCTAAACAGCCAATTC
CCGGGTGAAGTTACCA
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