CK937509

Overview
NameCK937509
Unique NameCK937509
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length744
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937509 vs. ExPASy Swiss-Prot
Match: Y1744_MYCMM (Uncharacterized oxidoreductase MMAR_1744 OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=MMAR_1744 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.800e-15
Identity = 60/186 (32.26%), Postives = 91/186 (48.92%), Query Frame = 3
Query:  102 TIPLVGFGTAQFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGHAHRQLVLPALQTSLKNLGLEHIDLYLIHFPVSLKPGTGFPFSKEDIEPLDYEGVWEAMEECQNLGLTKSIGVSNFACKRLERXXATAKIPPXVNQSGVEPSLAAKEAER 659
            T+P++G G A    G + +  + +V  A+E+G R  DTAA Y +E  +G AIA +   G+   R ELF+T+K+            A + SL  LGL+++DLYLIH+P    P  G            Y   +  + + +  G T+SIGVSNF  + +        + P VNQ  + P L   E  +
Sbjct:   19 TMPVLGMGVA----GLSDDETERAVSAALEIGCRLIDTAAAYGNEAAVGRAIAAS---GI--PRAELFVTTKVATADHGFTASREACKASLDRLGLDYVDLYLIHWPA---PAAG-----------KYVDAFGGLIQARGEGFTRSIGVSNFTEEHVSNVIDLTFVTPAVNQVELHPLLNQDELRK 181          
BLAST of CK937509 vs. ExPASy Swiss-Prot
Match: Y3816_MYCA1 (Uncharacterized oxidoreductase MAV_3816 OS=Mycobacterium avium (strain 104) GN=MAV_3816 PE=3 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.657e-15
Identity = 61/179 (34.08%), Postives = 91/179 (50.84%), Query Frame = 3
Query:  102 TIPLVGFGTAQFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGHAHRQLVLPALQTSLKNLGLEHIDLYLIHFPVSLKPGTGFPFSKEDIEPLDYEGVWEAMEECQNLGLTKSIGVSNFACKRLERXXATAKIPPXVNQSGVEPSL 638
            T+P++G G A+     + +  + +V  A+EVG R  DTAA Y +E  +G AIA +   G+   R ELF+T+KL       +  + A + SL+ LGL+++DLYLIH+P    P  G            Y   +  M + +  G  +SIGVSNF  + L        + P VNQ  + P L
Sbjct:   22 TMPVLGLGVAEL----SDDETERAVSAALEVGCRLIDTAAAYGNEAAVGRAIAAS---GI--PRAELFVTTKLATSDQGFKGAMDACEASLERLGLDYVDLYLIHWPA---PALG-----------TYVNSFGGMIQSRGNGHARSIGVSNFTEEYLTTVIDLTFVTPAVNQIELHPLL 177          
BLAST of CK937509 vs. ExPASy Swiss-Prot
Match: Y3007_MYCPA (Uncharacterized oxidoreductase MAP_3007 OS=Mycobacterium paratuberculosis GN=MAP_3007 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.657e-15
Identity = 61/179 (34.08%), Postives = 91/179 (50.84%), Query Frame = 3
Query:  102 TIPLVGFGTAQFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGHAHRQLVLPALQTSLKNLGLEHIDLYLIHFPVSLKPGTGFPFSKEDIEPLDYEGVWEAMEECQNLGLTKSIGVSNFACKRLERXXATAKIPPXVNQSGVEPSL 638
            T+P++G G A+     + +  + +V  A+EVG R  DTAA Y +E  +G AIA +   G+   R ELF+T+KL       +  + A + SL+ LGL+++DLYLIH+P    P  G            Y   +  M + +  G  +SIGVSNF  + L        + P VNQ  + P L
Sbjct:   19 TMPVLGLGVAEL----SDDETERAVSAALEVGCRLIDTAAAYGNEAAVGRAIAAS---GI--PRAELFVTTKLATSDQGFKGAMDACEASLERLGLDYVDLYLIHWPA---PALG-----------TYVNSFGGMIQSRGNGHARSIGVSNFTEEYLTTVIDLTFVTPAVNQIELHPLL 174          
BLAST of CK937509 vs. ExPASy Swiss-Prot
Match: Y1987_MYCUA (Uncharacterized oxidoreductase MUL_1987 OS=Mycobacterium ulcerans (strain Agy99) GN=MUL_1987 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.777e-15
Identity = 59/186 (31.72%), Postives = 91/186 (48.92%), Query Frame = 3
Query:  102 TIPLVGFGTAQFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGHAHRQLVLPALQTSLKNLGLEHIDLYLIHFPVSLKPGTGFPFSKEDIEPLDYEGVWEAMEECQNLGLTKSIGVSNFACKRLERXXATAKIPPXVNQSGVEPSLAAKEAER 659
            T+P++G G A    G + +  + +V  A+E+G R  DTAA Y +E  +G A+A +   G+   R ELF+T+K+            A + SL  LGL+++DLYLIH+P    P  G            Y   +  + + +  G T+SIGVSNF  + +        + P VNQ  + P L   E  +
Sbjct:   20 TMPVLGMGVA----GLSDDETERAVSAALEIGCRLIDTAAAYGNEAAVGRALAAS---GI--PRAELFVTTKVATADHGFTASREACKASLDRLGLDYVDLYLIHWPA---PAVG-----------KYVDAFGGLIQARGEGFTRSIGVSNFTEEHVSNVIDLTFVTPAVNQVELHPLLNQDELRK 182          
BLAST of CK937509 vs. ExPASy Swiss-Prot
Match: Y1669_MYCLE (Uncharacterized oxidoreductase ML1669 OS=Mycobacterium leprae GN=ML1669 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.148e-15
Identity = 63/198 (31.82%), Postives = 92/198 (46.46%), Query Frame = 3
Query:   66 SIPEAPLGSTGKTIPLVGFGTAQFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGHAHRQLVLPALQTSLKNLGLEHIDLYLIHFPVSLKPGTGFPFSKEDIEPLDYEGVWEAMEECQNLGLTKSIGVSNFACKRLERXXATAKIPPXVNQSGVEPSLAAKEAER 659
            SIP   L     T+PL+G G A+     + +  + +V+ A+E+G R  DTAA Y +E  +  AIA +   G+   R +LF+T+KL            A   SL  LG++++DLYLIH+P    P  G            Y   W  M + +  G  +SIGV NF  + L        + P VNQ  + P L   E  +
Sbjct:    9 SIPSITLNDEN-TMPLLGLGVAEL----SEDETERAVLAALEIGCRLIDTAAAYGNEAAVSRAIAAS---GI--PRAQLFVTTKLATPDQGFTKSQDACNASLDRLGMDYVDLYLIHWPA---PPVG-----------QYVDAWGGMIQSRGEGHARSIGVCNFTEEHLSAIIDLTFVTPAVNQIELHPLLNQDEMRK 182          
BLAST of CK937509 vs. ExPASy Swiss-Prot
Match: Y1669_MYCLB (Uncharacterized oxidoreductase MLBr01669 OS=Mycobacterium leprae (strain Br4923) GN=MLBr01669 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.148e-15
Identity = 63/198 (31.82%), Postives = 92/198 (46.46%), Query Frame = 3
Query:   66 SIPEAPLGSTGKTIPLVGFGTAQFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGHAHRQLVLPALQTSLKNLGLEHIDLYLIHFPVSLKPGTGFPFSKEDIEPLDYEGVWEAMEECQNLGLTKSIGVSNFACKRLERXXATAKIPPXVNQSGVEPSLAAKEAER 659
            SIP   L     T+PL+G G A+     + +  + +V+ A+E+G R  DTAA Y +E  +  AIA +   G+   R +LF+T+KL            A   SL  LG++++DLYLIH+P    P  G            Y   W  M + +  G  +SIGV NF  + L        + P VNQ  + P L   E  +
Sbjct:    9 SIPSITLNDEN-TMPLLGLGVAEL----SEDETERAVLAALEIGCRLIDTAAAYGNEAAVSRAIAAS---GI--PRAQLFVTTKLATPDQGFTKSQDACNASLDRLGMDYVDLYLIHWPA---PPVG-----------QYVDAWGGMIQSRGEGHARSIGVCNFTEEHLSAIIDLTFVTPAVNQIELHPLLNQDEMRK 182          
BLAST of CK937509 vs. ExPASy Swiss-Prot
Match: DKGB_CORSS (2,5-diketo-D-gluconic acid reductase B OS=Corynebacterium sp. (strain SHS752001) GN=dkgB PE=1 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 9.960e-13
Identity = 59/191 (30.89%), Postives = 86/191 (45.03%), Query Frame = 3
Query:   60 MVSIPEAPLGSTGKTIPLVGFGTAQFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGHAHRQLVLPALQTSLKNLGLEHIDLYLIHFPVSLKPGTGFPFSKEDIEPLDYEGVWEAMEECQNLGLTKSIGVSNFACKRLERXXATAKIPPXVNQSGVEP 632
            M +IP   L   G+     G GT    +    +    ++V AI+ GYR  DTA  Y++E  +G A+  +        RDEL + SK+      R   + +++ SL  LGL+ IDL LIH+P    P  G            +   W  M + +  GL +SIGVSNF    L+       + P VNQ  + P
Sbjct:    1 MPNIPTISLND-GRPFAEPGLGT----YNLRGDEGVAAMVAAIDSGYRLLDTAVNYENESEVGRAVRASS-----VDRDELIVASKIPGRQHGRAEAVDSIRGSLDRLGLDVIDLQLIHWP---NPSVG-----------RWLDTWRGMIDAREAGLVRSIGVSNFTEPMLKTLIDETGVTPAVNQVELHP 167          
BLAST of CK937509 vs. ExPASy Swiss-Prot
Match: YER5_SCHPO (Uncharacterized oxidoreductase C2F3.05c OS=Schizosaccharomyces pombe GN=SPAC2F3.05c PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 1.733e-12
Identity = 50/156 (32.05%), Postives = 78/156 (50.00%), Query Frame = 3
Query:  168 ESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGHAHRQLVLPALQTSLKNLGLEHIDLYLIHFPVSLKPGTGFPFSKEDIEPLDYEGVWEAMEECQNLGLTKSIGVSNFACKRL-ERXXATAKIPPXVNQSGVEP 632
            +SV  A++ GYRH D+A +Y +E   G AI + +     K R++++ TSKL     ++   L ++  S+K  GL +IDL+L+H P                   D    W+A+E+    G  ++IGVSNF    + E   +  KI P VNQ  + P
Sbjct:   31 DSVYAALQCGYRHIDSAQMYHNEADCGRAILKFMEETGTK-REDIWFTSKLNDLSGYKS-TLSSIDASVKACGLGYIDLFLLHSPYG-----------------DRIESWKALEKGVEEGKLRAIGVSNFGPHHIQELLDSHPKIIPCVNQIELHP 167          

HSP 2 Score: 25.409 bits (54), Expect = 1.733e-12
Identity = 11/24 (45.83%), Postives = 14/24 (58.33%), Query Frame = 2
Query:  662 FCEXXGIHITAYSPLGAKGTNMGN 733
            +CE  GI + AY+PL   G   GN
Sbjct:  177 YCESKGIQLAAYAPL-VHGEKFGN 199          
BLAST of CK937509 vs. ExPASy Swiss-Prot
Match: YOF5_CAEEL (Uncharacterized oxidoreductase ZK1290.5 OS=Caenorhabditis elegans GN=ZK1290.5 PE=2 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 9.322e-11
Identity = 54/182 (29.67%), Postives = 88/182 (48.35%), Query Frame = 3
Query:   90 STGKTIPLVGFGTAQFPFGAATEAVKESVVHAIE-VGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGHAHRQLVLPALQTSLKNLGLEHIDLYLIHFPVSLKPGTGFPFSKEDIEPLDYEGVWEAMEECQNLGLTKSIGVSNFACKRLERXXATAKIPPXVNQSGVEP 632
            S    +PL+G GT       +     ++V+H+I+  GYR  DTA  Y  E+ LG A+           R+E+F+++KLW      + V  A QTS + L  +++D+Y+IH P        +  ++++ +    E  W  ME        +SIGVSN++ + L+     A I P  NQ  + P
Sbjct:    8 SNNVEMPLIGLGTTH-----SGGYYHDAVLHSIKKCGYRLIDTAKRYGVEKQLGIAVKNCS-----VPREEMFLSTKLWPVDCGDE-VYNAFQTSCEKLQTDYLDMYMIHMPQL----PDWIVNQKETK----EKTWRQMELLYEDEHVRSIGVSNYSIEDLDELLEFASILPHANQVELHP 170          
The following BLAST results are available for this feature:
BLAST of CK937509 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
Y1744_MYCMM2.800e-1532.26Uncharacterized oxidoreductase MMAR_1744 OS=Mycoba... [more]
Y3816_MYCA13.657e-1534.08Uncharacterized oxidoreductase MAV_3816 OS=Mycobac... [more]
Y3007_MYCPA3.657e-1534.08Uncharacterized oxidoreductase MAP_3007 OS=Mycobac... [more]
Y1987_MYCUA4.777e-1531.72Uncharacterized oxidoreductase MUL_1987 OS=Mycobac... [more]
Y1669_MYCLE8.148e-1531.82Uncharacterized oxidoreductase ML1669 OS=Mycobacte... [more]
Y1669_MYCLB8.148e-1531.82Uncharacterized oxidoreductase MLBr01669 OS=Mycoba... [more]
DKGB_CORSS9.960e-1330.892,5-diketo-D-gluconic acid reductase B OS=Coryneba... [more]
YER5_SCHPO1.733e-1232.05Uncharacterized oxidoreductase C2F3.05c OS=Schizos... [more]
YOF5_CAEEL9.322e-1129.67Uncharacterized oxidoreductase ZK1290.5 OS=Caenorh... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004779_F09 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0003_IIIF_F09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937509 ID=CK937509; Name=CK937509; organism=Citrus sinensis; type=EST; length=744bp
GGGGGTGCAGCCCCGTGAGCCAAATGCACCTTGATTCCTCTTCGTTGAAA
ATGAAAACAATGGTAAGCATCCCAGAGGCTCCTTTGGGCTCCACCGGCAA
AACCATACCTCTTGTTGGCTTCGGCACGGCCCAATTTCCGTTCGGAGCAG
CCACTGAAGCAGTAAAAGAATCCGTTGTGCATGCAATAGAAGTCGGCTAC
AGACACTTCGACACCGCCGCAATATACCAGTCCGAGGAGCCTCTTGGGGA
AGCAATAGCCCAAGCGTTGCGTCTTGGGCTCATCAAATCACGCGATGAGC
TCTTTATCACTTCAAAGCTTTGGTTCGGCCACGCACACCGTCAACTTGTC
CTCCCTGCGCTACAAACTTCTCTCAAGAATCTGGGATTGGAGCATATTGA
TTTGTATCTGATTCATTTTCCGGTAAGCTTGAAGCCTGGAACAGGGTTCC
CATTCAGTAAAGAAGATATTGAGCCACTTGATTATGAGGGTGTTTGGGAG
GCCATGGAGGAGTGTCAAAATCTCGGCCTCACTAAATCCATTGGAGTCAG
CAACTTTGCTTGCAAGAGACTTGAGAGGTTNNNTGCTACTGCAAAAATCC
CTCCTGNNGTCAATCAAAGTGGAGTTGAACCCAGTTTGGCAGCAAAAGAA
GCTGAGAGATTTTCTGTGAGAANNNNGGCATTCATATTACAGCCTACTCG
CCGTTAGGAGCCAAAGGAACAAATATGGGGAACTAATCGAGTCA
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