CK937501
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937501 vs. ExPASy Swiss-Prot
Match: SKP1_YEAST (Suppressor of kinetochore protein 1 OS=Saccharomyces cerevisiae GN=SKP1 PE=1 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 2.086e-27 Identity = 72/189 (38.10%), Postives = 103/189 (54.50%), Query Frame = 2 Query: 149 SKKITLKSSDGEAFEVDEAVALESQTIKHMI---------------------------------EDDCADNGI--PLPNVTSKILSKVIEYCKKHVEASKSD-DRATSGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWA 607 + + L S +GE F VD+ +A S +K+ + +DD D+ I P+PNV S +L KVIE+ + H +++ D D S + +WD +F+KVDQ L+++ILAANYLNIK LLD C+ VA+MI+G++PEEIR+TFNI NDFTP N+WA Sbjct: 3 TSNVVLVSGEGERFTVDKKIAERSLLLKNYLNDMHDSNLQNNSDSESDSDSETNHKSKDNNNGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDFTPEEEAAIRRENEWA 191
BLAST of CK937501 vs. ExPASy Swiss-Prot
Match: ASK6_ARATH (SKP1-like protein 6 OS=Arabidopsis thaliana GN=ASK6 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.399e-23 Identity = 57/87 (65.52%), Postives = 68/87 (78.16%), Query Frame = 2 Query: 227 IKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVEASKSDDRATSGVDDDLKAWDTDFV-KVDQATLFDLILAANYLNIKSLLDLT 484 IK M EDDCADNGIPLPNVTSKIL VIEYCKKHV SK ++DLK WD +F+ K++Q+ LFD+++AANYLNI+SLLDLT Sbjct: 3 IKGMAEDDCADNGIPLPNVTSKILLLVIEYCKKHVVESK---------EEDLKKWDAEFMKKMEQSILFDVMMAANYLNIQSLLDLT 80
BLAST of CK937501 vs. ExPASy Swiss-Prot
Match: ASK21_ARATH (SKP1-like protein 21 OS=Arabidopsis thaliana GN=ASK21 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.514e-12 Identity = 46/141 (32.62%), Postives = 80/141 (56.74%), Query Frame = 2 Query: 158 ITLKSSDGEAFEVDEAVALESQTI-KHMIEDDCADN---GIPLPN-VTSKILSKVIEYCKKHVEASKSDDRATSGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFT 565 I L+++DG +V++ VA+ I + +I+ + I LP V +LS + +YC+ H +S+ + K +D F+++D L +L AA+ L +K L+DLT + +A +I+GKTPEEIR+ F++ +D T Sbjct: 18 IWLETADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNYAISLPQRVNPAMLSLIFDYCRFHQVPGRSNK--------ERKVYDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFHLPDDLT 150
BLAST of CK937501 vs. ExPASy Swiss-Prot
Match: ASK20_ARATH (SKP1-like protein 20 OS=Arabidopsis thaliana GN=ASK20 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.668e-11 Identity = 44/141 (31.21%), Postives = 80/141 (56.74%), Query Frame = 2 Query: 158 ITLKSSDGEAFEVDEAVALESQTI-KHMIEDDCA---DNGIPLPN-VTSKILSKVIEYCKKHVEASKSDDRATSGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFT 565 I L+++DG +V++ VA+ I + +I+ ++ I LP V + S +++YC+ H +S+ + K +D F+++D L +L AA+ L +K L+DLT + +A +I+GK PEEIR+ F++ +D T Sbjct: 18 IWLQTADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNHAISLPQRVNPAMFSLILDYCRFHQLPGRSNK--------ERKTYDERFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKNPEEIREIFHLPDDLT 150 The following BLAST results are available for this feature:
BLAST of CK937501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK937501 ID=CK937501; Name=CK937501; organism=Citrus sinensis; type=EST; length=793bpback to top |