CK937496
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937496 vs. ExPASy Swiss-Prot
Match: H2A1_CANAL (Histone H2A.1 OS=Candida albicans GN=HTA1 PE=3 SV=3) HSP 1 Score: 144.05 bits (362), Expect = 5.489e-34 Identity = 71/110 (64.55%), Postives = 81/110 (73.64%), Query Frame = 1 Query: 172 SVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKG 501 S SRS KAGL FPVGR+ R L+ G YA+R+G+GAP GNAARDNKK+RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK GKG Sbjct: 15 STSRSAKAGLTFPVGRVHRLLRKGNYAQRIGSGAPVYLTSVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGDVTIAQGGVLPNIHQNLLPKKSGKG 124
BLAST of CK937496 vs. ExPASy Swiss-Prot
Match: H2A1_PICST (Histone H2A.1 OS=Pichia stipitis GN=HTA2 PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.223e-33 Identity = 75/120 (62.50%), Postives = 84/120 (70.00%), Query Frame = 1 Query: 172 SVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGDIGSASQE 531 S SRS KAGL FPVGR+ R L+ G YA+RVG+GAP GNAARDNKK+RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK GK ASQE Sbjct: 15 STSRSAKAGLTFPVGRVHRLLRKGNYAQRVGSGAPVYLTSVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKSGKS----AKASQE 130
BLAST of CK937496 vs. ExPASy Swiss-Prot
Match: H2A_NEUCR (Histone H2A OS=Neurospora crassa GN=hh2a PE=3 SV=3) HSP 1 Score: 142.51 bits (358), Expect = 1.597e-33 Identity = 77/119 (64.71%), Postives = 85/119 (71.43%), Query Frame = 1 Query: 178 SRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGK-GKGDIGSASQE 531 SRS KAGL FPVGR+ R L+ G YA+RVGAGAP GNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK GK GK +ASQE Sbjct: 19 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTGKTGK----NASQE 133
BLAST of CK937496 vs. ExPASy Swiss-Prot
Match: H2A_ASPTN (Histone H2A OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=hta1 PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.597e-33 Identity = 72/110 (65.45%), Postives = 79/110 (71.82%), Query Frame = 1 Query: 178 SRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKG 507 SRS KAGL FPVGR+ R L+ G YA+RVGAGAP GNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK K KG Sbjct: 18 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTPKAKG 127
BLAST of CK937496 vs. ExPASy Swiss-Prot
Match: H2A2_PSAMI (Late histone H2A.2.1 OS=Psammechinus miliaris PE=2 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 1.597e-33 Identity = 73/111 (65.77%), Postives = 80/111 (72.07%), Query Frame = 1 Query: 166 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGK 498 SK+ SRS +AGLQFPVGR+ RFLK G Y RVGAGAP GNAARDNKK+RI+PRH+QLAVRNDEEL+KLLG VTIA GGVLPNI LLPKK GK Sbjct: 12 SKAKSRSSRAGLQFPVGRVHRFLKKGNYGNRVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQTVLLPKKTGK 122
BLAST of CK937496 vs. ExPASy Swiss-Prot
Match: H2A_PODAN (Histone H2A OS=Podospora anserina GN=HTA1 PE=3 SV=3) HSP 1 Score: 142.124 bits (357), Expect = 2.086e-33 Identity = 75/118 (63.56%), Postives = 83/118 (70.34%), Query Frame = 1 Query: 178 SRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGDIGSASQE 531 SRS KAGL FPVGR+ R L+ G YA+RVGAGAP GNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK G G +ASQE Sbjct: 19 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTGTKPGK--NASQE 134
BLAST of CK937496 vs. ExPASy Swiss-Prot
Match: H2A_PHANO (Histone H2A OS=Phaeosphaeria nodorum GN=HTA1 PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.086e-33 Identity = 74/115 (64.35%), Postives = 82/115 (71.30%), Query Frame = 1 Query: 166 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGK-GKG 507 S + SRS KAGL FPVGR+ R L+ G YA+RVGAGAP GNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK K GKG Sbjct: 15 SSAQSRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTAKPGKG 129
BLAST of CK937496 vs. ExPASy Swiss-Prot
Match: H2A_KLULA (Histone H2A OS=Kluyveromyces lactis GN=HTA1 PE=3 SV=3) HSP 1 Score: 141.354 bits (355), Expect = 3.558e-33 Identity = 74/123 (60.16%), Postives = 85/123 (69.11%), Query Frame = 1 Query: 163 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGDIGSASQE 531 A S SRS KAGL FPVGR+ R L+ G YA+R+G+GAP GNAARDNKK RI+PRH+QLA+RND+EL+KLLG+VTIA GGVLPNIHQ LLPKK K K ASQE Sbjct: 12 AKASQSRSAKAGLTFPVGRVHRLLRKGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKSSKAK-----ASQE 129
BLAST of CK937496 vs. ExPASy Swiss-Prot
Match: H2A_GIBZE (Histone H2A OS=Gibberella zeae GN=HTA1 PE=3 SV=3) HSP 1 Score: 141.354 bits (355), Expect = 3.558e-33 Identity = 71/107 (66.36%), Postives = 78/107 (72.90%), Query Frame = 1 Query: 178 SRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGK 498 SRS KAGL FPVGR+ R L+ G YA+RVGAGAP GNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK GK Sbjct: 19 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTGK 125
BLAST of CK937496 vs. ExPASy Swiss-Prot
Match: H2A_CHAGB (Histone H2A OS=Chaetomium globosum GN=HTA1 PE=3 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 3.558e-33 Identity = 71/107 (66.36%), Postives = 78/107 (72.90%), Query Frame = 1 Query: 178 SRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGK 498 SRS KAGL FPVGR+ R L+ G YA+RVGAGAP GNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK GK Sbjct: 19 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTGK 125 The following BLAST results are available for this feature:
BLAST of CK937496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937496 ID=CK937496; Name=CK937496; organism=Citrus sinensis; type=EST; length=609bpback to top |