CK937496
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937496 vs. ExPASy Swiss-Prot
Match: H2A_ASPNG (Histone H2A OS=Aspergillus niger GN=httA PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 7.927e-33 Identity = 73/111 (65.77%), Postives = 80/111 (72.07%), Query Frame = 1 Query: 178 SRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGK-GKG 507 SRS KAGL FPVGR+ R L+ G YA+RVGAGAP GNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK K GKG Sbjct: 18 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTPKSGKG 128
BLAST of CK937496 vs. ExPASy Swiss-Prot
Match: H2A_ASPNC (Histone H2A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=httA PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 7.927e-33 Identity = 73/111 (65.77%), Postives = 80/111 (72.07%), Query Frame = 1 Query: 178 SRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGK-GKG 507 SRS KAGL FPVGR+ R L+ G YA+RVGAGAP GNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK K GKG Sbjct: 18 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTPKSGKG 128
BLAST of CK937496 vs. ExPASy Swiss-Prot
Match: H2A_ASPFU (Histone H2A OS=Aspergillus fumigatus GN=hta1 PE=3 SV=3) HSP 1 Score: 140.198 bits (352), Expect = 7.927e-33 Identity = 73/111 (65.77%), Postives = 80/111 (72.07%), Query Frame = 1 Query: 178 SRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGK-GKG 507 SRS KAGL FPVGR+ R L+ G YA+RVGAGAP GNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK K GKG Sbjct: 18 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTPKSGKG 128
BLAST of CK937496 vs. ExPASy Swiss-Prot
Match: H2A_ASPCL (Histone H2A OS=Aspergillus clavatus GN=hta1 PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 7.927e-33 Identity = 73/111 (65.77%), Postives = 80/111 (72.07%), Query Frame = 1 Query: 178 SRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGK-GKG 507 SRS KAGL FPVGR+ R L+ G YA+RVGAGAP GNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK K GKG Sbjct: 18 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTPKSGKG 128
BLAST of CK937496 vs. ExPASy Swiss-Prot
Match: H2A_AGABI (Histone H2A OS=Agaricus bisporus PE=2 SV=3) HSP 1 Score: 140.198 bits (352), Expect = 7.927e-33 Identity = 75/122 (61.48%), Postives = 85/122 (69.67%), Query Frame = 1 Query: 166 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGDIGSASQE 531 +KS+SRS KAGLQFPVGR+ R LK G YA+RVGAGAP GNAARDNKK RIVPRH+QLA+RNDEEL KLLG+V I+ GGV+P+I LLP K KGK D G SQE Sbjct: 18 TKSMSRSSKAGLQFPVGRVHRLLKKGNYAQRVGAGAPVYMAAVLEYLAAEILELAGNAARDNKKQRIVPRHLQLAIRNDEELHKLLGNVVISQGGVVPHIAPELLPSKSSKGKKDEG-VSQE 138
BLAST of CK937496 vs. ExPASy Swiss-Prot
Match: H2A2_PICST (Histone H2A.2 OS=Pichia stipitis GN=HTA2 PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 7.927e-33 Identity = 74/120 (61.67%), Postives = 84/120 (70.00%), Query Frame = 1 Query: 172 SVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGDIGSASQE 531 S SRS KAGL FPVGR+ R L+ G YA+RVG+GAP GNAARDNKK+RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ+LLP K K G ASQE Sbjct: 15 STSRSAKAGLTFPVGRVHRLLRKGNYAQRVGSGAPVYLTSVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQSLLPAKKAKP----GKASQE 130
BLAST of CK937496 vs. ExPASy Swiss-Prot
Match: H2A2_YEAST (Histone H2A.2 OS=Saccharomyces cerevisiae GN=HTA2 PE=1 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 1.352e-32 Identity = 73/123 (59.35%), Postives = 84/123 (68.29%), Query Frame = 1 Query: 163 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGDIGSASQE 531 A S SRS KAGL FPVGR+ R L+ G YA+R+G+GAP GNAARDNKK RI+PRH+QLA+RND+EL+KLLG+VTIA GGVLPNIHQ LLPKK K ASQE Sbjct: 13 AKASQSRSAKAGLTFPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKSAK----TAKASQE 131
BLAST of CK937496 vs. ExPASy Swiss-Prot
Match: H2A2_CANGA (Histone H2A.2 OS=Candida glabrata GN=HTA2 PE=3 SV=3) HSP 1 Score: 139.428 bits (350), Expect = 1.352e-32 Identity = 73/123 (59.35%), Postives = 86/123 (69.92%), Query Frame = 1 Query: 163 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGDIGSASQE 531 A S +RS KAGL FPVGR+ R L+ G YA+R+G+GAP GNAARDNKK+RI+PRH+QLA+RND+EL+KLLG+VTIA GGVLPNIHQ LLPKK K SASQE Sbjct: 13 AKASQTRSAKAGLTFPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKSAK-----PSASQE 130
BLAST of CK937496 vs. ExPASy Swiss-Prot
Match: H2A1_YEAST (Histone H2A.1 OS=Saccharomyces cerevisiae GN=HTA1 PE=1 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 1.352e-32 Identity = 73/123 (59.35%), Postives = 84/123 (68.29%), Query Frame = 1 Query: 163 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGDIGSASQE 531 A S SRS KAGL FPVGR+ R L+ G YA+R+G+GAP GNAARDNKK RI+PRH+QLA+RND+EL+KLLG+VTIA GGVLPNIHQ LLPKK K ASQE Sbjct: 13 AKASQSRSAKAGLTFPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKSAKAT----KASQE 131
BLAST of CK937496 vs. ExPASy Swiss-Prot
Match: H2A1_CANGA (Histone H2A.1 OS=Candida glabrata GN=HTA1 PE=3 SV=3) HSP 1 Score: 139.428 bits (350), Expect = 1.352e-32 Identity = 73/123 (59.35%), Postives = 86/123 (69.92%), Query Frame = 1 Query: 163 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGDIGSASQE 531 A S +RS KAGL FPVGR+ R L+ G YA+R+G+GAP GNAARDNKK+RI+PRH+QLA+RND+EL+KLLG+VTIA GGVLPNIHQ LLPKK K SASQE Sbjct: 13 AKASQTRSAKAGLTFPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKSAK-----PSASQE 130 The following BLAST results are available for this feature:
BLAST of CK937496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK937496 ID=CK937496; Name=CK937496; organism=Citrus sinensis; type=EST; length=609bpback to top |