CX675323

Overview
NameCX675323
Unique NameCX675323
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length865
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSI (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA5 PE=2 SV=1)

HSP 1 Score: 352.058 bits (902), Expect = 2.416e-96
Identity = 164/219 (74.89%), Postives = 193/219 (88.13%), Query Frame = -3
Query:  204 TAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 860
            T+IPLL YCTLPA+CLLT KFI P+++N+AS+ F+SLF+ IFATGILEMRWSGVGID+WWRNEQFWVIGGVSSHLFAVFQGLLKV+AGIDT+FTVTSK  D++ +F+ELY FKW          L++N +GVVAGVS AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL+GRQNRTPTIV+VWSILLASIFSLLWVR+DPF  +  GP +E+CG++C
Sbjct:  874 TSIPLLAYCTLPAICLLTGKFITPELTNIASLWFMSLFICIFATGILEMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGLLKVIAGIDTSFTVTSKGGDDE-EFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKNDGPLLEECGLDC 1091          
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CESA3_ORYSJ (Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA3 PE=2 SV=1)

HSP 1 Score: 350.517 bits (898), Expect = 7.029e-96
Identity = 163/219 (74.43%), Postives = 193/219 (88.13%), Query Frame = -3
Query:  204 TAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 860
            T+IPLL YCTLPA+CLLT KFI P+++N+AS+ F+SLF+ IFATGILEMRWSGVGID+WWRNEQFWVIGGVSSHLFA+FQGLLKV+AGIDT+FTVTSK  D++ +F+ELY FKW          L++N +GVVAGVS AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL+GRQNRTPTIV+VWSILLASIFSLLWVR+DPF  +  GP +E+CG++C
Sbjct:  875 TSIPLLAYCTLPAICLLTGKFITPELTNVASLWFMSLFICIFATGILEMRWSGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVIAGIDTSFTVTSKGGDDE-EFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKNDGPLLEECGLDC 1092          
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CESA6_ORYSJ (Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1)

HSP 1 Score: 350.132 bits (897), Expect = 9.180e-96
Identity = 163/219 (74.43%), Postives = 192/219 (87.67%), Query Frame = -3
Query:  204 TAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 860
            T+IPLL YCTLPA+CLLT KFI P+++N+AS+ F+SLF+ IF TGILEMRWSGV ID+WWRNEQFWVIGGVSSHLFAVFQGLLKVLAG+DT+FTVTSKA D++ +F+ELY FKW          L++N +GVVAGVS AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL+GRQNRTPTIV+VWSILLASIFSLLWVR+DPF  +  GP +E+CG++C
Sbjct:  874 TSIPLLAYCTLPAICLLTGKFITPELTNVASLWFMSLFICIFVTGILEMRWSGVAIDDWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGVDTSFTVTSKAGDDE-EFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKNNGPLLEECGLDC 1091          
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CESA7_ORYSJ (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA7 PE=2 SV=1)

HSP 1 Score: 342.813 bits (878), Expect = 1.466e-93
Identity = 160/220 (72.73%), Postives = 190/220 (86.36%), Query Frame = -3
Query:  204 TAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKAS-DEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 860
            T+IPLL YCT+PAVCLLT KFI+P ++NLASI FI+LFLSI ATG+LE+RWSGV I++WWRNEQFWVIGGVS+HLFAVFQGLLKVL G+DTNFTVTSKA+ DE   F ELY+FKW          ++IN+VG+VAGVS A+N+GY SWGPLFGKLFF+FWVI+HLYPFLKGLMGRQNRTPTIVV+WSILLASIFSL+WVR+DPF  +  GP ++ CG++C
Sbjct:  844 TSIPLLAYCTIPAVCLLTGKFIIPTLNNLASIWFIALFLSIIATGVLELRWSGVSIEDWWRNEQFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKAAADETDAFGELYLFKWTTLLVPPTTLIIINMVGIVAGVSDAVNNGYGSWGPLFGKLFFSFWVILHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLVWVRIDPFIPKPKGPVLKPCGVSC 1063          
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CESA4_ARATH (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1)

HSP 1 Score: 340.887 bits (873), Expect = 5.569e-93
Identity = 163/220 (74.09%), Postives = 190/220 (86.36%), Query Frame = -3
Query:  204 TAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSK-ASDEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 860
            T+IPLL YCT+PAVCLLT KFI+P I+N ASI F++LFLSI AT ILE+RWSGV I++ WRNEQFWVIGGVS+HLFAVFQGLLKVL G+DTNFTVTSK ASDE  +F +LY+FKW          +++N+VGVVAGVS AIN+GY SWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVV+WSILLASIFSL+WVR+DPF  + TGP ++QCG++C
Sbjct:  830 TSIPLLAYCTIPAVCLLTGKFIIPTINNFASIWFLALFLSIIATAILELRWSGVSINDLWRNEQFWVIGGVSAHLFAVFQGLLKVLFGVDTNFTVTSKGASDEADEFGDLYLFKWTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLVWVRIDPFLPKQTGPLLKQCGVDC 1049          
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CESA1_ARATH (Cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Arabidopsis thaliana GN=CESA1 PE=1 SV=1)

HSP 1 Score: 338.961 bits (868), Expect = 2.116e-92
Identity = 156/204 (76.47%), Postives = 181/204 (88.73%), Query Frame = -3
Query:  252 LTAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPF 863
            +T+IPL+ YC LPA CL+T++FI+P+ISN ASI FI LF+SI  TGILE+RWSGV I++WWRNEQFWVIGG S+HLFAVFQGLLKVLAGIDTNFTVTSKA+DEDGDF ELY+FKW          L++NL+G+VAGVSYA+NSGYQSWGPLFGKLFFA WVI HLYPFLKGL+GRQNRTPTIV+VWS+LLASIFSLLWVR++PF
Sbjct:  861 ITSIPLIAYCILPAFCLITDRFIIPEISNYASIWFILLFISIAVTGILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKATDEDGDFAELYIFKWTALLIPPTTVLLVNLIGIVAGVSYAVNSGYQSWGPLFGKLFFALWVIAHLYPFLKGLLGRQNRTPTIVIVWSVLLASIFSLLWVRINPF 1064          
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CESAA_ARATH (Probable cellulose synthase A catalytic subunit 10 [UDP-forming] OS=Arabidopsis thaliana GN=CESA10 PE=2 SV=1)

HSP 1 Score: 331.643 bits (849), Expect = 3.379e-90
Identity = 153/206 (74.27%), Postives = 178/206 (86.41%), Query Frame = -3
Query:  246 LTAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTT 863
            +T+IPLL YC LPA CL+TN FI+P+ISNLAS+ F+ LF SI+A+ ILE++WS V +++WWRNEQFWVIGG S+HLFAVFQGLLKV AGIDTNFTVTSKASDEDGDF ELY+FKW          L++NLVG+VAGVSYAINSGYQSWGPL GKL FAFWV+ HLYPFLKGL+GRQNRTPTIV+VWS LLASIFSLLWVR++PF +
Sbjct:  848 ITSIPLLAYCMLPAFCLITNTFIIPEISNLASLCFMLLFASIYASAILELKWSDVALEDWWRNEQFWVIGGTSAHLFAVFQGLLKVFAGIDTNFTVTSKASDEDGDFAELYVFKWTSLLIPPTTILLVNLVGIVAGVSYAINSGYQSWGPLMGKLLFAFWVVAHLYPFLKGLLGRQNRTPTIVIVWSALLASIFSLLWVRINPFVS 1053          
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CESA9_ARATH (Probable cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Arabidopsis thaliana GN=CESA9 PE=2 SV=1)

HSP 1 Score: 326.635 bits (836), Expect = 1.087e-88
Identity = 151/219 (68.95%), Postives = 188/219 (85.84%), Query Frame = -3
Query:  204 TAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 860
            T++PLL+YC+LPA+CLLT KFI+P+ISN A I+F+ +F+SI  TGILEM+W  +GID+WWRNEQFWVIGGVSSHLFA+FQGLLKVLAG+ TNFTVTSKA+D DG+F+ELY+FKW          L+IN+VGV+ GVS AIN+GY SWGPLFG+LFFA WVIVHLYPFLKGL+G+Q+R PTI++VWSILLASI +LLWVRV+PF ++  GP +E CG++C
Sbjct:  870 TSLPLLVYCSLPAICLLTGKFIVPEISNYAGILFLLMFMSIAVTGILEMQWGKIGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVLAGVSTNFTVTSKAAD-DGEFSELYIFKWTSLLIPPTTLLIINIVGVIVGVSDAINNGYDSWGPLFGRLFFALWVIVHLYPFLKGLLGKQDRVPTIILVWSILLASILTLLWVRVNPFVSK-DGPVLEICGLDC 1086          
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CESA5_ARATH (Cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Arabidopsis thaliana GN=CESA5 PE=1 SV=2)

HSP 1 Score: 325.094 bits (832), Expect = 3.162e-88
Identity = 151/219 (68.95%), Postives = 190/219 (86.76%), Query Frame = -3
Query:  204 TAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 860
            T+IPLL+YC+LPA+CLLT KFI+P+ISN ASI+F++LF SI  TGILEM+W  VGID+WWRNEQFWVIGGVS+HLFA+FQGLLKVLAG++TNFTVTSKA+D DG+F+ELY+FKW          L+IN++GV+ G+S AI++GY SWGPLFG+LFFAFWVI+HLYPFLKGL+G+Q+R PTI++VWSILLASI +LLWVRV+PF  +  GP +E CG++C
Sbjct:  852 TSIPLLVYCSLPAICLLTGKFIVPEISNYASILFMALFGSIAVTGILEMQWGKVGIDDWWRNEQFWVIGGVSAHLFALFQGLLKVLAGVETNFTVTSKAAD-DGEFSELYIFKWTSLLIPPTTLLIINVIGVIVGISDAISNGYDSWGPLFGRLFFAFWVILHLYPFLKGLLGKQDRMPTIILVWSILLASILTLLWVRVNPFVAK-GGPILEICGLDC 1068          
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CESA6_ARATH (Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2)

HSP 1 Score: 324.709 bits (831), Expect = 4.130e-88
Identity = 150/219 (68.49%), Postives = 189/219 (86.30%), Query Frame = -3
Query:  204 TAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 860
            T++PL++YC+LPA+CLLT KFI+P+ISN ASI+F++LF SI  TGILEM+W  VGID+WWRNEQFWVIGGVS+HLFA+FQGLLKVLAG+DTNFTVTSKA+D DG+F++LY+FKW          L+IN++GV+ GVS AI++GY SWGPLFG+LFFA WVI+HLYPFLKGL+G+Q+R PTI+VVWSILLASI +LLWVRV+PF  +  GP +E CG++C
Sbjct:  867 TSLPLIVYCSLPAICLLTGKFIVPEISNYASILFMALFSSIAITGILEMQWGKVGIDDWWRNEQFWVIGGVSAHLFALFQGLLKVLAGVDTNFTVTSKAAD-DGEFSDLYLFKWTSLLIPPMTLLIINVIGVIVGVSDAISNGYDSWGPLFGRLFFALWVIIHLYPFLKGLLGKQDRMPTIIVVWSILLASILTLLWVRVNPFVAK-GGPILEICGLDC 1083          
The following BLAST results are available for this feature:
BLAST of CX675323 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CESA5_ORYSI2.416e-9674.89Probable cellulose synthase A catalytic subunit 5 ... [more]
CESA3_ORYSJ7.029e-9674.43Probable cellulose synthase A catalytic subunit 3 ... [more]
CESA6_ORYSJ9.180e-9674.43Probable cellulose synthase A catalytic subunit 6 ... [more]
CESA7_ORYSJ1.466e-9372.73Cellulose synthase A catalytic subunit 7 [UDP-form... [more]
CESA4_ARATH5.569e-9374.09Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESA1_ARATH2.116e-9276.47Cellulose synthase A catalytic subunit 1 [UDP-form... [more]
CESAA_ARATH3.379e-9074.27Probable cellulose synthase A catalytic subunit 10... [more]
CESA9_ARATH1.087e-8868.95Probable cellulose synthase A catalytic subunit 9 ... [more]
CESA5_ARATH3.162e-8868.95Cellulose synthase A catalytic subunit 5 [UDP-form... [more]
CESA6_ARATH4.130e-8868.49Cellulose synthase A catalytic subunit 6 [UDP-form... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_61E02_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-61E02-J3-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675323 ID=CX675323; Name=CX675323; organism=Citrus sinensis; type=EST; length=865bp
TTTTTTTTAGTTTTCACCACCTATAGATATATAAATATATGTATCCTGCA
CAAGATGCGAATTCACATACACAAAAACAAGTTCACATACACAAAAACAA
GTTCACTGACAGGACGAGGAGGCAAAATCATGAACTTCAGTGATTCCCAC
CTTTTAGACTTGAGACCAAAACAATTTTTCTGAAATACAGCCACTATTTG
TCAGCAGTTGATTCCACATTGCTCGACATCAGGACCAGTGACTCTGGTGG
TAAAGGGATCAACTCGCACCCATAGTAAAGAGAATATGGAGGCAAGGAGA
ATTGACCACACGACAACAATGGTGGGTGTCCGGTTTTGGCGTCCCATCAA
ACCTTTGAGGAAGGGGTAAAGATGGACGATCACCCAAAAGGCAAAGAATA
GCTTACCAAAGAGAGGACCCCATGATTGATACCCGCTGTTGATGGCATAC
GAGACACCCGCAACTACACCAACCAAGTTTATGACAAGAAGAGTTGTTGG
TGGAATAAGTAGTGTTGTCCATTTGAACATATAGAGCTCAGTAAAATCTC
CGTCTTCATCTGATGCCTTGGAGGTGACAGTGAAGTTGGTGTCAATACCA
GCAAGTACTTTGAGAAGACCTTGGAAAACAGCAAATAGATGGGATGAAAC
ACCGCCAATAACCCAAAACTGTTCGTTTCTCCACCATTCATCGATTCCAA
CACCACTCCACCTCATTTCCAGAATACCAGTGGCGAAGATGGACAGAAAG
AGAGAAATAAACACTATACTGGCAAGGTTACTAATCTGAGGCATAATGAA
CTTGTTCGTTAATAGACAGACAGCTGGCAGCGTGCAATACATGAGAAGAG
GAATTGCAGTGAGAG
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