CK937439
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK937439 vs. ExPASy Swiss-Prot
Match: VA714_ARATH (Vesicle-associated membrane protein 714 OS=Arabidopsis thaliana GN=VAMP714 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.563e-24 Identity = 58/164 (35.37%), Postives = 103/164 (62.80%), Query Frame = 1 Query: 175 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPA--SNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYXXXXXXXXXXXXLNKEFGPKLKEPMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKT 660 +++YA VARG VVLAE++ +GN ++ + L+KL S+ + ++ D + F+ L +G T+ +A+++ GR++P ++LE + F+ Y +N EF L + M++ +P + L +V+ +VSE++ VM+ENIEK+++RG++IELLVDKT Sbjct: 2 AIVYAVVARGTVVLAEFSAVTGNTGAVVRRILEKLSPEISDERLCFSQDRYIFHILRSDGLTFLCMANDTFGRRVPFSYLEEIHMRFMKNYGKVAHNAPAYA-MNDEFSRVLHQQMEFFSSNPS-VDTLNRVRGEVSEIRSVMVENIEKIMERGDRIELLVDKT 163
BLAST of CK937439 vs. ExPASy Swiss-Prot
Match: VAM7B_DICDI (Vesicle-associated membrane protein 7B OS=Dictyostelium discoideum GN=vamp7B PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.911e-22 Identity = 58/162 (35.80%), Postives = 97/162 (59.88%), Query Frame = 1 Query: 178 LIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYXXXXXXXXXXXXLNKEFGPKLKEPMQYCVDHPEEISKLAKVKAQVSEVKGVMMENI-EKVLDRGEKIELLVDKT 660 +IY+ VARG+ VLAE+T +GNF +I + L +P ++ K +Y + + F+YLV + TY +ADE GR+IP FL+ VK+ F S Y +N +F L+ M + + + +++ A++ EVK +++ +I ++L RGEKIE+LV++T Sbjct: 3 IIYSLVARGSSVLAEFTSTNGNFVTITRRILDLIPPNDTKMSYVYEKYIFHYLVSDTLTYLCMADEEFGRRIPFTFLDDVKNRFKSMY-GDKGKTAIAYGMNSDFSRTLENLMDH-YSNTTRVDTMSRTMAEIDEVKNILVSDIAPQLLKRGEKIEMLVERT 162
BLAST of CK937439 vs. ExPASy Swiss-Prot
Match: VAMP7_MOUSE (Vesicle-associated membrane protein 7 OS=Mus musculus GN=Vamp7 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 9.483e-22 Identity = 54/162 (33.33%), Postives = 91/162 (56.17%), Query Frame = 1 Query: 175 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYXXXXXXXXXXXXLNKEFGPKLKEPMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKT 660 ++++A VARG +LA++ GNF + Q L K+P+ NNK TY+ + F+Y+ + Y + D+ R +FL VK F + Y +N EF L +++ ++ + + K+ + +AQV E+KG+M+ NI+ V RGE++ELL+DKT Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFSFLNEVKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKHHSEN-KSLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKT 161
BLAST of CK937439 vs. ExPASy Swiss-Prot
Match: VAMP7_CHICK (Vesicle-associated membrane protein 7 OS=Gallus gallus GN=VAMP7 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.239e-21 Identity = 57/164 (34.76%), Postives = 89/164 (54.27%), Query Frame = 1 Query: 175 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYXXXXXXXXXXXXLNKEFGPKLKEPMQYCVDHPEE--ISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKT 660 ++++A VARG +LA++ GNF + Q L K+P+ NNK TY+ + F+Y+ + Y + D+ R FL +K F + Y +N EF L ++Y H E ++A+ +AQV E+KG+M+ NI+ V RGEK+ELL+DKT Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIIYLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKY---HSESKGTDQVAETQAQVDELKGIMVRNIDLVAQRGEKLELLIDKT 161
BLAST of CK937439 vs. ExPASy Swiss-Prot
Match: VAMP7_RAT (Vesicle-associated membrane protein 7 OS=Rattus norvegicus GN=Vamp7 PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.618e-21 Identity = 53/162 (32.72%), Postives = 90/162 (55.56%), Query Frame = 1 Query: 175 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYXXXXXXXXXXXXLNKEFGPKLKEPMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKT 660 ++++A VARG +LA++ GNF + Q L K+P+ NNK TY+ + F+Y+ + Y + D+ R FL VK F + Y +N EF L +++ ++ + + ++ + +AQV E+KG+M+ NI+ V RGE++ELL+DKT Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFGFLNEVKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKHHSEN-QSLDRVTETQAQVDELKGIMVRNIDLVAQRGERLELLIDKT 161
BLAST of CK937439 vs. ExPASy Swiss-Prot
Match: VAMP7_HUMAN (Vesicle-associated membrane protein 7 OS=Homo sapiens GN=VAMP7 PE=1 SV=3) HSP 1 Score: 101.293 bits (251), Expect = 4.706e-21 Identity = 53/162 (32.72%), Postives = 90/162 (55.56%), Query Frame = 1 Query: 175 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYXXXXXXXXXXXXLNKEFGPKLKEPMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKT 660 ++++A VARG +LA++ GNF + Q L K+P+ NNK TY+ + F+Y+ + Y + D+ R FL +K F + Y +N EF L +++ ++ + + K+ + +AQV E+KG+M+ NI+ V RGE++ELL+DKT Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKHHSEN-KGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKT 161
BLAST of CK937439 vs. ExPASy Swiss-Prot
Match: VAMP7_BOVIN (Vesicle-associated membrane protein 7 OS=Bos taurus GN=VAMP7 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.706e-21 Identity = 53/162 (32.72%), Postives = 90/162 (55.56%), Query Frame = 1 Query: 175 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYXXXXXXXXXXXXLNKEFGPKLKEPMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKT 660 ++++A VARG +LA++ GNF + Q L K+P+ NNK TY+ + F+Y+ + Y + D+ R FL +K F + Y +N EF L +++ ++ + + K+ + +AQV E+KG+M+ NI+ V RGE++ELL+DKT Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKHHSEN-KGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKT 161
BLAST of CK937439 vs. ExPASy Swiss-Prot
Match: VAMP7_PONAB (Vesicle-associated membrane protein 7 OS=Pongo abelii GN=VAMP7 PE=2 SV=3) HSP 1 Score: 100.138 bits (248), Expect = 1.048e-20 Identity = 53/162 (32.72%), Postives = 89/162 (54.94%), Query Frame = 1 Query: 175 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYXXXXXXXXXXXXLNKEFGPKLKEPMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKT 660 ++++A VARG +LA++ GNF + Q L K+P+ NNK TY + F+Y+ + Y + D+ R FL +K F + Y +N EF L +++ ++ + + K+ + +AQV E+KG+M+ NI+ V RGE++ELL+DKT Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYPHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKHHSEN-KGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKT 161
BLAST of CK937439 vs. ExPASy Swiss-Prot
Match: VAM7A_DICDI (Vesicle-associated membrane protein 7A OS=Dictyostelium discoideum GN=vamp7A PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 9.813e-19 Identity = 57/166 (34.34%), Postives = 90/166 (54.22%), Query Frame = 1 Query: 163 MSQKSLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYXXXXXXXXXXXXLNKEFGPKLKEPMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKT 660 MSQ ++YA V+ V L E+ +GNF +A + + K+P ++ K Y + H F+Y+ +N + + E G QIP FL ++ +F+ Y + F L+E M+Y +P+ +K+ V QVSE KG + + IEK + RGEKIE++VDKT Sbjct: 1 MSQTDILYACVSYKGVCLVEHKIANGNFIDLARRLITKIPPTSKKI-YTSENHNFHYISENDLAFLCLCHEKLGVQIPSEFLSDIRQQFIRSYGQSFSQNSPTATYDP-FIRVLEERMKY-YSNPKS-NKMNLVMDQVSEAKGALTDAIEKTIHRGEKIEIIVDKT 162 The following BLAST results are available for this feature:
BLAST of CK937439 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937439 ID=CK937439; Name=CK937439; organism=Citrus sinensis; type=EST; length=660bpback to top |