CK937436

Overview
NameCK937436
Unique NameCK937436
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length593
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK3_CAEEL (Probable S-adenosylmethionine synthetase 3 OS=Caenorhabditis elegans GN=sams-3 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 7.376e-49
Identity = 97/160 (60.62%), Postives = 119/160 (74.38%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            FLFTSESV+EGHPDK+CDQISDAVLDA L QDP +KVACET TKT M+M+ GEIT+KA VDY+ +VR+  + IG+     G D   C VLV +EQQSP+IA GV  H  K  +D+GAGDQG MFGYATDET E MPL+ +L+ KL  +L E+R++    W
Sbjct:    6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGV--HVDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEW 163          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_BRAHW (S-adenosylmethionine synthetase OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN=metK PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.258e-48
Identity = 96/164 (58.54%), Postives = 121/164 (73.78%), Query Frame = 1
Query:  100 KMETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV---HGHFTKRPEDI--GAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 576
            +++ + F+SESV EGHPDK+CD +SDAVLD CL+QDP S+VACET  KT M+M+ GEITTKAK+DY+KI RDT R IG+ S D+G DAD C V+ +I +QSPDI  GV    G F     ++  GAGDQG MFGYA +ET  FMPL+  LA +L  RLT+VRK+
Sbjct:    3 EIKNYYFSSESVTEGHPDKICDAVSDAVLDECLKQDPNSRVACETLAKTGMIMIAGEITTKAKLDYQKIARDTVRRIGYTSSDMGFDADTCAVMESIAEQSPDIDMGVSAGKGLFNSESSNVSEGAGDQGIMFGYAINETETFMPLTIHLAHRLAERLTKVRKD 166          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK5_CAEEL (Probable S-adenosylmethionine synthetase 5 OS=Caenorhabditis elegans GN=sams-5 PE=2 SV=2)

HSP 1 Score: 191.045 bits (484), Expect = 3.660e-48
Identity = 97/160 (60.62%), Postives = 118/160 (73.75%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            FLFTSESV+EGHPDK+CDQISDAVLDA L QDP +KVACET TKT M+M+ GEIT+KA VDY+ +VR+  + IG+     G D   C VLV +EQQSP+IA GV  H  K   D+GAGDQG MFGYATDET E MPL+ +L+ KL  +L E+R++    W
Sbjct:    6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGV--HVDKDIADVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNYKLHELRRSGELEW 163          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_LACPL (S-adenosylmethionine synthetase OS=Lactobacillus plantarum GN=metK PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.538e-46
Identity = 93/168 (55.36%), Postives = 119/168 (70.83%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED------IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            E  LFTSESV+EGHPDK+ DQISDA+LDA L QDP+++VA ET   T +V+VFGE++TKA VD +K+VRDT +SIG+V    G D D+C VLV++++QSPDIAQGV      R  D      IGAGDQG MFGYA +ET E MPL   L+ +L  ++  +RK+ T  W
Sbjct:    3 ERHLFTSESVSEGHPDKIADQISDAILDAMLAQDPQARVAVETSVTTGLVLVFGEVSTKAYVDIQKVVRDTIKSIGYVDGQYGFDGDNCAVLVSLDEQSPDIAQGVDDSLETRSGDADPLDQIGAGDQGMMFGYAINETPELMPLPIALSHRLMRKIAALRKDGTIKW 170          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_PHOPR (S-adenosylmethionine synthetase OS=Photobacterium profundum GN=metK PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 2.623e-46
Identity = 97/163 (59.51%), Postives = 116/163 (71.17%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            M   LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MVMV GEITT A VD E+I R+T R IG+V+ ++G DA+ C VL  I +QSPDI QGV     + P ++GAGDQG MFGYA+DET   MP     A +L  R  +VRKN T  W
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVMVGGEITTSAWVDIEEITRETIREIGYVNSEMGFDANSCAVLSAIGKQSPDINQGVD---REDPRELGAGDQGIMFGYASDETDVLMPAPVTYAHRLVQRQAKVRKNGTLPW 160          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_PROMH (S-adenosylmethionine synthetase OS=Proteus mirabilis (strain HI4320) GN=metK PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 3.426e-46
Identity = 99/163 (60.74%), Postives = 114/163 (69.94%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            M T LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MVMV GEITTKA VD E+I R T R IG+ S D+G DA+ C V+  I +QSPDI QGV       P + GAGDQG MFGYAT+ET   MP     A +L  R  +VRKN T  W
Sbjct:    1 MTTHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVMVGGEITTKAWVDIEEITRKTVREIGYTSSDMGFDANSCAVISAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAQVRKNGTLPW 160          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_PHOLL (S-adenosylmethionine synthetase OS=Photorhabdus luminescens subsp. laumondii GN=metK PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 7.632e-46
Identity = 98/163 (60.12%), Postives = 114/163 (69.94%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            M T+LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MVMV GEITT A VD E+I R T R IG+V+ ++G DA+ C VL  I +QSPDI QGV     + P   GAGDQG MFGYAT+ET   MP     A +L  R  EVRKN    W
Sbjct:    1 MTTYLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVMVGGEITTSAWVDIEEITRQTVREIGYVNSEMGFDANSCAVLSAIGKQSPDINQGVD---REDPLQQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGVLPW 160          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_CLOTE (S-adenosylmethionine synthetase OS=Clostridium tetani GN=metK PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 7.632e-46
Identity = 97/162 (59.88%), Postives = 114/162 (70.37%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKR-----PED-IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNST 582
            LFTSESV EGHPDK+CDQISDAVLDA LE+DP  +VACET   T MV+V GEITT   VD  KIVR+T  +IG+     G D+D C VL +I +QSPDIA GV      +      ED IGAGDQG MFGYA +ETSE+MP++  +A KL  RL+EVRKN T
Sbjct:    4 LFTSESVTEGHPDKICDQISDAVLDAILERDPNGRVACETSVTTGMVLVTGEITTNCYVDIPKIVRNTIEAIGYTRAKYGFDSDTCAVLTSISEQSPDIAMGVDESLESKQGGMDKEDVIGAGDQGMMFGYANNETSEYMPMAISIAHKLSRRLSEVRKNGT 165          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_PSEA6 (S-adenosylmethionine synthetase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=metK PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 9.968e-46
Identity = 96/163 (58.90%), Postives = 113/163 (69.33%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            M   LFTSESV+EGHPDK+ DQISDAVLDA L+QDP+++VACET  KT MVMV GE+TT A VD E++ R+T R IG+   D+G DAD C VL  I +QSPDI QGV      RPED GAGDQG MFGYA+DET   MP     A +L  R  E+RK+    W
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILKQDPKARVACETYVKTGMVMVGGEVTTNAWVDIEELTRNTVREIGYTHSDMGFDADSCAVLNAIGKQSPDINQGVD---RTRPEDQGAGDQGLMFGYASDETDVLMPAPVTYAHRLVKRQAEIRKSGQLDW 160          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_VIBCM (S-adenosylmethionine synthetase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=metK PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.221e-45
Identity = 97/159 (61.01%), Postives = 111/159 (69.81%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            LFTSESV+EGHPDK+ DQISDAVLDA  EQDP+++VACET  KT MVMV GEITT A VD E+I R T R IG+V  D+G DA+ C VL  I +QSPDI QGV       P++ GAGDQG MFGYAT+ET   MP     A +L  R  EVRKN T  W
Sbjct:    6 LFTSESVSEGHPDKIADQISDAVLDAIFEQDPKARVACETYVKTGMVMVGGEITTSAWVDIEEITRQTVREIGYVHSDMGFDANSCAVLNTIGKQSPDINQGVD---KADPKEQGAGDQGIMFGYATNETEVLMPAPITYAHRLMQRQAEVRKNGTLPW 161          
The following BLAST results are available for this feature:
BLAST of CK937436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK3_CAEEL7.376e-4960.63Probable S-adenosylmethionine synthetase 3 OS=Caen... [more]
METK_BRAHW1.258e-4858.54S-adenosylmethionine synthetase OS=Brachyspira hyo... [more]
METK5_CAEEL3.660e-4860.63Probable S-adenosylmethionine synthetase 5 OS=Caen... [more]
METK_LACPL1.538e-4655.36S-adenosylmethionine synthetase OS=Lactobacillus p... [more]
METK_PHOPR2.623e-4659.51S-adenosylmethionine synthetase OS=Photobacterium ... [more]
METK_PROMH3.426e-4660.74S-adenosylmethionine synthetase OS=Proteus mirabil... [more]
METK_PHOLL7.632e-4660.12S-adenosylmethionine synthetase OS=Photorhabdus lu... [more]
METK_CLOTE7.632e-4659.88S-adenosylmethionine synthetase OS=Clostridium tet... [more]
METK_PSEA69.968e-4658.90S-adenosylmethionine synthetase OS=Pseudoalteromon... [more]
METK_VIBCM2.221e-4561.01S-adenosylmethionine synthetase OS=Vibrio cholerae... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004780_F08 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0003_IVF_F08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937436 ID=CK937436; Name=CK937436; organism=Citrus sinensis; type=EST; length=593bp
GGGGGCCCAAACTCAATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTA
AGTCTGAATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATA
AGATGGAGACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCC
GACAAGTTGTGCGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGA
GCAGGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACA
TGGTCATGGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAG
AAGATTGTTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGT
GGGTCTTGACGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAA
GCCCGGATATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAG
GACATTGGTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGA
GACCTCTGAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTG
CTCGTCTCACGGAGGTTAGGAAGAATAGTACCTGNNNTTGGCT
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