CK937436

Overview
NameCK937436
Unique NameCK937436
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length593
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_VIBC3 (S-adenosylmethionine synthetase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=metK PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.221e-45
Identity = 97/159 (61.01%), Postives = 111/159 (69.81%), Query Frame = 1 
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            LFTSESV+EGHPDK+ DQISDAVLDA  EQDP+++VACET  KT MVMV GEITT A VD E+I R T R IG+V  D+G DA+ C VL  I +QSPDI QGV       P++ GAGDQG MFGYAT+ET   MP     A +L  R  EVRKN T  W
Sbjct:    6 LFTSESVSEGHPDKIADQISDAVLDAIFEQDPKARVACETYVKTGMVMVGGEITTSAWVDIEEITRQTVREIGYVHSDMGFDANSCAVLNTIGKQSPDINQGVD---KADPKEQGAGDQGIMFGYATNETEVLMPAPITYAHRLMQRQAEVRKNGTLPW 161
[Close]
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_SHISS (S-adenosylmethionine synthetase OS=Shigella sonnei (strain Ss046) GN=metK PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.900e-45
Identity = 98/163 (60.12%), Postives = 113/163 (69.33%), Query Frame = 1 
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            M   LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MV+V GEITT A VD E+I R+T R IG+V  D+G DA+ C VL  I +QSPDI QGV       P + GAGDQG MFGYAT+ET   MP     A +L  R  EVRKN T  W
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPW 160
[Close]
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_SHIFL (S-adenosylmethionine synthetase OS=Shigella flexneri GN=metK PE=3 SV=2)

HSP 1 Score: 181.415 bits (459), Expect = 2.900e-45
Identity = 98/163 (60.12%), Postives = 113/163 (69.33%), Query Frame = 1 
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            M   LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MV+V GEITT A VD E+I R+T R IG+V  D+G DA+ C VL  I +QSPDI QGV       P + GAGDQG MFGYAT+ET   MP     A +L  R  EVRKN T  W
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPW 160
[Close]
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_SHIF8 (S-adenosylmethionine synthetase OS=Shigella flexneri serotype 5b (strain 8401) GN=metK PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.900e-45
Identity = 98/163 (60.12%), Postives = 113/163 (69.33%), Query Frame = 1 
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            M   LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MV+V GEITT A VD E+I R+T R IG+V  D+G DA+ C VL  I +QSPDI QGV       P + GAGDQG MFGYAT+ET   MP     A +L  R  EVRKN T  W
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPW 160
[Close]
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_SHIDS (S-adenosylmethionine synthetase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=metK PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.900e-45
Identity = 98/163 (60.12%), Postives = 113/163 (69.33%), Query Frame = 1 
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            M   LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MV+V GEITT A VD E+I R+T R IG+V  D+G DA+ C VL  I +QSPDI QGV       P + GAGDQG MFGYAT+ET   MP     A +L  R  EVRKN T  W
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPW 160
[Close]
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_SHIBS (S-adenosylmethionine synthetase OS=Shigella boydii serotype 4 (strain Sb227) GN=metK PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.900e-45
Identity = 98/163 (60.12%), Postives = 113/163 (69.33%), Query Frame = 1 
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            M   LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MV+V GEITT A VD E+I R+T R IG+V  D+G DA+ C VL  I +QSPDI QGV       P + GAGDQG MFGYAT+ET   MP     A +L  R  EVRKN T  W
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPW 160
[Close]
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_SHIB3 (S-adenosylmethionine synthetase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=metK PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.900e-45
Identity = 98/163 (60.12%), Postives = 113/163 (69.33%), Query Frame = 1 
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            M   LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MV+V GEITT A VD E+I R+T R IG+V  D+G DA+ C VL  I +QSPDI QGV       P + GAGDQG MFGYAT+ET   MP     A +L  R  EVRKN T  W
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPW 160
[Close]
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_KLEP7 (S-adenosylmethionine synthetase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=metK PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.900e-45
Identity = 98/163 (60.12%), Postives = 113/163 (69.33%), Query Frame = 1 
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            M   LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MV+V GEITT A VD E+I R+T R IG+V  D+G DA+ C VL  I +QSPDI QGV       P + GAGDQG MFGYAT+ET   MP     A +L  R  EVRKN T  W
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLMPAPVTYAHRLVQRQAEVRKNGTLPW 160
[Close]
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_KLEP3 (S-adenosylmethionine synthetase OS=Klebsiella pneumoniae (strain 342) GN=metK PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.900e-45
Identity = 98/163 (60.12%), Postives = 113/163 (69.33%), Query Frame = 1 
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            M   LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MV+V GEITT A VD E+I R+T R IG+V  D+G DA+ C VL  I +QSPDI QGV       P + GAGDQG MFGYAT+ET   MP     A +L  R  EVRKN T  W
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLMPAPVTYAHRLVQRQAEVRKNGTLPW 160
[Close]
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_ESCF3 (S-adenosylmethionine synthetase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=metK PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.900e-45
Identity = 98/163 (60.12%), Postives = 113/163 (69.33%), Query Frame = 1 
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            M   LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MV+V GEITT A VD E+I R+T R IG+V  D+G DA+ C VL  I +QSPDI QGV       P + GAGDQG MFGYAT+ET   MP     A +L  R  EVRKN T  W
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPW 160
The following BLAST results are available for this feature:
BLAST of CK937436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_VIBC32.221e-4561.01S-adenosylmethionine synthetase OS=Vibrio cholerae... [more]
METK_SHISS2.900e-4560.12S-adenosylmethionine synthetase OS=Shigella sonnei... [more]
METK_SHIFL2.900e-4560.12S-adenosylmethionine synthetase OS=Shigella flexne... [more]
METK_SHIF82.900e-4560.12S-adenosylmethionine synthetase OS=Shigella flexne... [more]
METK_SHIDS2.900e-4560.12S-adenosylmethionine synthetase OS=Shigella dysent... [more]
METK_SHIBS2.900e-4560.12S-adenosylmethionine synthetase OS=Shigella boydii... [more]
METK_SHIB32.900e-4560.12S-adenosylmethionine synthetase OS=Shigella boydii... [more]
METK_KLEP72.900e-4560.12S-adenosylmethionine synthetase OS=Klebsiella pneu... [more]
METK_KLEP32.900e-4560.12S-adenosylmethionine synthetase OS=Klebsiella pneu... [more]
METK_ESCF32.900e-4560.12S-adenosylmethionine synthetase OS=Escherichia fer... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004780_F08 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0003_IVF_F08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937436 ID=CK937436; Name=CK937436; organism=Citrus sinensis; type=EST; length=593bp
GGGGGCCCAAACTCAATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTA
AGTCTGAATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATA
AGATGGAGACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCC
GACAAGTTGTGCGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGA
GCAGGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACA
TGGTCATGGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAG
AAGATTGTTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGT
GGGTCTTGACGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAA
GCCCGGATATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAG
GACATTGGTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGA
GACCTCTGAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTG
CTCGTCTCACGGAGGTTAGGAAGAATAGTACCTGNNNTTGGCT
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