CK937436

Overview
NameCK937436
Unique NameCK937436
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length593
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_ECOBW (S-adenosylmethionine synthetase OS=Escherichia coli (strain K12 / BW2952) GN=metK PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.900e-45
Identity = 98/163 (60.12%), Postives = 113/163 (69.33%), Query Frame = 1 
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            M   LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MV+V GEITT A VD E+I R+T R IG+V  D+G DA+ C VL  I +QSPDI QGV       P + GAGDQG MFGYAT+ET   MP     A +L  R  EVRKN T  W
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPW 160
[Close]
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_ECO8A (S-adenosylmethionine synthetase OS=Escherichia coli O8 (strain IAI1) GN=metK PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.900e-45
Identity = 98/163 (60.12%), Postives = 113/163 (69.33%), Query Frame = 1 
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            M   LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MV+V GEITT A VD E+I R+T R IG+V  D+G DA+ C VL  I +QSPDI QGV       P + GAGDQG MFGYAT+ET   MP     A +L  R  EVRKN T  W
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPW 160
[Close]
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_ECO7I (S-adenosylmethionine synthetase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=metK PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.900e-45
Identity = 98/163 (60.12%), Postives = 113/163 (69.33%), Query Frame = 1 
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            M   LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MV+V GEITT A VD E+I R+T R IG+V  D+G DA+ C VL  I +QSPDI QGV       P + GAGDQG MFGYAT+ET   MP     A +L  R  EVRKN T  W
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPW 160
[Close]
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_ECO5E (S-adenosylmethionine synthetase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=metK PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.900e-45
Identity = 98/163 (60.12%), Postives = 113/163 (69.33%), Query Frame = 1 
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            M   LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MV+V GEITT A VD E+I R+T R IG+V  D+G DA+ C VL  I +QSPDI QGV       P + GAGDQG MFGYAT+ET   MP     A +L  R  EVRKN T  W
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPW 160
[Close]
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_ECO57 (S-adenosylmethionine synthetase OS=Escherichia coli O157:H7 GN=metK PE=3 SV=2)

HSP 1 Score: 181.415 bits (459), Expect = 2.900e-45
Identity = 98/163 (60.12%), Postives = 113/163 (69.33%), Query Frame = 1 
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            M   LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MV+V GEITT A VD E+I R+T R IG+V  D+G DA+ C VL  I +QSPDI QGV       P + GAGDQG MFGYAT+ET   MP     A +L  R  EVRKN T  W
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPW 160
[Close]
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_ECO55 (S-adenosylmethionine synthetase OS=Escherichia coli (strain 55989 / EAEC) GN=metK PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.900e-45
Identity = 98/163 (60.12%), Postives = 113/163 (69.33%), Query Frame = 1 
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            M   LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MV+V GEITT A VD E+I R+T R IG+V  D+G DA+ C VL  I +QSPDI QGV       P + GAGDQG MFGYAT+ET   MP     A +L  R  EVRKN T  W
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPW 160
[Close]
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_ECO27 (S-adenosylmethionine synthetase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=metK PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.900e-45
Identity = 98/163 (60.12%), Postives = 113/163 (69.33%), Query Frame = 1 
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            M   LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MV+V GEITT A VD E+I R+T R IG+V  D+G DA+ C VL  I +QSPDI QGV       P + GAGDQG MFGYAT+ET   MP     A +L  R  EVRKN T  W
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPW 160
[Close]
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_ECO24 (S-adenosylmethionine synthetase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=metK PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.900e-45
Identity = 98/163 (60.12%), Postives = 113/163 (69.33%), Query Frame = 1 
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            M   LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MV+V GEITT A VD E+I R+T R IG+V  D+G DA+ C VL  I +QSPDI QGV       P + GAGDQG MFGYAT+ET   MP     A +L  R  EVRKN T  W
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPW 160
[Close]
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_CITK8 (S-adenosylmethionine synthetase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=metK PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.900e-45
Identity = 98/163 (60.12%), Postives = 113/163 (69.33%), Query Frame = 1 
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            M   LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MV+V GEITT A VD E+I R+T R IG+V  D+G DA+ C VL  I +QSPDI QGV       P + GAGDQG MFGYAT+ET   MP     A +L  R  EVRKN T  W
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPW 160
[Close]
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_YERPY (S-adenosylmethionine synthetase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=metK PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 3.788e-45
Identity = 97/163 (59.51%), Postives = 113/163 (69.33%), Query Frame = 1 
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            M   LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MV+V GE+TT A VD E+I R T R IG+V  D+G DA+ C VL  I +QSPDI QGV     + P + GAGDQG MFGYAT+ETS  MP     A +L  R  EVRKN    W
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEVTTNAWVDIEEITRRTIREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RENPLEQGAGDQGLMFGYATNETSVLMPAPITYAHRLVERQAEVRKNGALPW 160
The following BLAST results are available for this feature:
BLAST of CK937436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_ECOBW2.900e-4560.12S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECO8A2.900e-4560.12S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECO7I2.900e-4560.12S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECO5E2.900e-4560.12S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECO572.900e-4560.12S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECO552.900e-4560.12S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECO272.900e-4560.12S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECO242.900e-4560.12S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_CITK82.900e-4560.12S-adenosylmethionine synthetase OS=Citrobacter kos... [more]
METK_YERPY3.788e-4559.51S-adenosylmethionine synthetase OS=Yersinia pseudo... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004780_F08 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0003_IVF_F08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937436 ID=CK937436; Name=CK937436; organism=Citrus sinensis; type=EST; length=593bp
GGGGGCCCAAACTCAATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTA
AGTCTGAATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATA
AGATGGAGACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCC
GACAAGTTGTGCGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGA
GCAGGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACA
TGGTCATGGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAG
AAGATTGTTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGT
GGGTCTTGACGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAA
GCCCGGATATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAG
GACATTGGTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGA
GACCTCTGAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTG
CTCGTCTCACGGAGGTTAGGAAGAATAGTACCTGNNNTTGGCT
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