CK937436

Overview
NameCK937436
Unique NameCK937436
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length593
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_MYCS2 (S-adenosylmethionine synthetase OS=Mycobacterium smegmatis GN=metK PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.394e-39
Identity = 95/161 (59.01%), Postives = 105/161 (65.22%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH-GHFTK-----RPEDI-GAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 576
            LFTSESV EGHPDK+CD ISD+VLDA LEQDP+S+VA ET   T  V V GE+TT A  D  KIVRD    IG+ S   G D   C V V I  QSPDIAQGV   H T+      P D+ GAGDQG MFGYA  +T E MPL   LA +L  RLTEVRKN
Sbjct:    6 LFTSESVTEGHPDKICDAISDSVLDALLEQDPKSRVAVETLVTTGQVHVAGEVTTTAYADIPKIVRDRILDIGYDSSTKGFDGASCGVNVAIGAQSPDIAQGVDTAHETRVEGKADPLDLQGAGDQGLMFGYAIGDTPELMPLPIALAHRLARRLTEVRKN 166          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_HAES2 (S-adenosylmethionine synthetase OS=Haemophilus somnus (strain 2336) GN=metK PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.394e-39
Identity = 87/163 (53.37%), Postives = 104/163 (63.80%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            M ++LFTSESV+EGHPDK+ DQISDAVLD  L QDP+++VACET  KT M +V GEITT A VD E + R     IG+   D+G D   C VL  I +QS DI QGV     + P D GAGDQG MFGYAT+ET   MP +   A +L  R  +VRK     W
Sbjct:    1 MSSYLFTSESVSEGHPDKIADQISDAVLDEILRQDPKARVACETYVKTGMALVGGEITTSAWVDIENLTRQVICDIGYKHSDIGFDGHSCAVLNAIGKQSSDINQGVD---RESPLDQGAGDQGIMFGYATNETDVLMPAAITYAHRLMERQAQVRKKGILDW 160          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_HAES1 (S-adenosylmethionine synthetase OS=Haemophilus somnus (strain 129Pt) GN=metK PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.394e-39
Identity = 87/163 (53.37%), Postives = 104/163 (63.80%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            M ++LFTSESV+EGHPDK+ DQISDAVLD  L QDP+++VACET  KT M +V GEITT A VD E + R     IG+   D+G D   C VL  I +QS DI QGV     + P D GAGDQG MFGYAT+ET   MP +   A +L  R  +VRK     W
Sbjct:    1 MSSYLFTSESVSEGHPDKIADQISDAVLDEILRQDPKARVACETYVKTGMALVGGEITTSAWVDIENLTRQVICDIGYKHSDIGFDGHSCAVLNAIGKQSSDINQGVD---RESPLDQGAGDQGIMFGYATNETDVLMPAAITYAHRLMERQAQVRKKGILDW 160          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_BLOPB (S-adenosylmethionine synthetase OS=Blochmannia pennsylvanicus (strain BPEN) GN=metK PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.394e-39
Identity = 86/164 (52.44%), Postives = 112/164 (68.29%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV-HGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            M  + FTSESV+EGHPDK+ DQISDA+LD+ L QDP ++VACET  KT +V++ GEITT A V+ E+I R+T R IG+V  D+G DA+ C +L  I +QS DI   + HG+ +      GAGDQG MFGYAT+ETS FMP     A +L  R ++VRK+    W
Sbjct:    1 MSQYSFTSESVSEGHPDKIADQISDAILDSILAQDPRARVACETYVKTGIVIMGGEITTTAWVNMEEIARNTIRDIGYVHSDMGFDANSCVILSVINKQSSDIQYSIDHGNTSTLQR--GAGDQGLMFGYATNETSVFMPAPITYAHRLIKRKSQVRKSGVLPW 162          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_ROSCS (S-adenosylmethionine synthetase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=metK PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 1.821e-39
Identity = 86/169 (50.89%), Postives = 109/169 (64.50%), Query Frame = 1
Query:  100 KMETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEIT-TKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPE---------DIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 576
            K     FTSESV EGHPDK+CDQ+SDAVLDA L  DP ++VACET T T +++V GE+T  +  +  E+IVR T + IG+     G DAD C V+V I  QSPDIAQGV+     R +          IGAGDQG MFG+A +ET E MPL   LA ++G RL+ +RK+
Sbjct:    7 KSPRLFFTSESVTEGHPDKICDQVSDAVLDAFLSHDPRARVACETATTTGLIVVIGEVTYEQGYIPIEEIVRKTIKDIGYTDAAYGFDADTCGVMVAIHGQSPDIAQGVNRALEVRSDGQVTEEEVATIGAGDQGMMFGFACNETPELMPLPIALAHRIGRRLSRLRKD 175          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_FINM2 (S-adenosylmethionine synthetase OS=Finegoldia magna (strain ATCC 29328) GN=metK PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 1.821e-39
Identity = 83/163 (50.92%), Postives = 110/163 (67.48%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV------HGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRK 573
            M+    TSESV EGHPDK+CDQISDA+LDA +++D +++VACETC+ T +VMV GEITT + VD   IVR T   IG+ + D G+DA  C ++ ++E+QS DIAQGV        + +   +  GAGDQG +FGYAT+ET   +PL   L+ KL  RL  VRK
Sbjct:    1 MKNIFLTSESVTEGHPDKVCDQISDAILDAIIKEDKDARVACETCSTTGLVMVMGEITTTSYVDIRSIVRKTLAEIGYDNADYGIDARTCAIITSLEEQSKDIAQGVDESEEYKDNKSDEYDRYGAGDQGMVFGYATNETESGLPLPLELSHKLARRLATVRK 163          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_BURVG (S-adenosylmethionine synthetase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=metK PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 1.821e-39
Identity = 86/160 (53.75%), Postives = 107/160 (66.88%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            + FTSESV+EGHPDK+ DQISDA+LDA LEQD  S+VA ET   T +V++ GEITT A +DY +I RDT + IG+ + D G+D   C VLV  ++QSPDIAQGV         D GAGDQG MFGYA DET E MPL   L+ +L  R   +R++    W
Sbjct:    5 YFFTSESVSEGHPDKVADQISDAILDAILEQDKYSRVAAETLCNTGLVVLAGEITTTANIDYIQIARDTIKRIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGVDRAHDDN-LDQGAGDQGLMFGYACDETPELMPLPIYLSHRLVERQASLRRDGRLPW 163          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_BUCAP (S-adenosylmethionine synthetase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=metK PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 1.821e-39
Identity = 84/163 (51.53%), Postives = 111/163 (68.10%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            M  +LFTSESV+EGHPDK+ DQISDA+LD  ++QD +++VACET  KT MV++ GEITT A VD E+I R+T  +IG+++ + G DA+ C VL  I +QSPDI QGV       P + GAGDQG +FGYAT+ET   MP     A  L  + +E+RK +   W
Sbjct:    1 MTEYLFTSESVSEGHPDKIADQISDALLDEIIKQDLKARVACETYVKTGMVLIGGEITTTAWVDVEEITRNTINNIGYINSETGFDANSCAVLSTIGKQSPDITQGVD---RCNPLEQGAGDQGIIFGYATNETEVLMPAPITYAHLLVKKQSELRKKNILHW 160          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_BORPE (S-adenosylmethionine synthetase OS=Bordetella pertussis GN=metK PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 1.821e-39
Identity = 87/163 (53.37%), Postives = 109/163 (66.87%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI---GAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            FLFTSESV+EGHPDK+ DQISDA+LDA   QDP ++VA ET   T +V++ GEITT A VDY ++ RDT R IG+ + + G+D   C VLV  ++QSPDIAQGV     +  ED    GAGDQG MFGYA DET + MP     A +L  R +E+RK+    W
Sbjct:    6 FLFTSESVSEGHPDKVADQISDAILDAIFTQDPNARVAAETLCNTGLVVLAGEITTTANVDYIQVARDTIRHIGYDNTEYGIDYKGCAVLVAYDKQSPDIAQGV----DRSSEDYLNQGAGDQGLMFGYACDETPDLMPAPIWYAHRLVQRQSELRKDGRLPW 164          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_BORPA (S-adenosylmethionine synthetase OS=Bordetella parapertussis GN=metK PE=3 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 1.821e-39
Identity = 87/163 (53.37%), Postives = 109/163 (66.87%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI---GAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            FLFTSESV+EGHPDK+ DQISDA+LDA   QDP ++VA ET   T +V++ GEITT A VDY ++ RDT R IG+ + + G+D   C VLV  ++QSPDIAQGV     +  ED    GAGDQG MFGYA DET + MP     A +L  R +E+RK+    W
Sbjct:    6 FLFTSESVSEGHPDKVADQISDAILDAIFTQDPNARVAAETLCNTGLVVLAGEITTTANVDYIQVARDTIRHIGYDNTEYGIDYKGCAVLVAYDKQSPDIAQGV----DRSSEDYLNQGAGDQGLMFGYACDETPDLMPAPIWYAHRLVQRQSELRKDGRLPW 164          
The following BLAST results are available for this feature:
BLAST of CK937436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_MYCS21.394e-3959.01S-adenosylmethionine synthetase OS=Mycobacterium s... [more]
METK_HAES21.394e-3953.37S-adenosylmethionine synthetase OS=Haemophilus som... [more]
METK_HAES11.394e-3953.37S-adenosylmethionine synthetase OS=Haemophilus som... [more]
METK_BLOPB1.394e-3952.44S-adenosylmethionine synthetase OS=Blochmannia pen... [more]
METK_ROSCS1.821e-3950.89S-adenosylmethionine synthetase OS=Roseiflexus cas... [more]
METK_FINM21.821e-3950.92S-adenosylmethionine synthetase OS=Finegoldia magn... [more]
METK_BURVG1.821e-3953.75S-adenosylmethionine synthetase OS=Burkholderia vi... [more]
METK_BUCAP1.821e-3951.53S-adenosylmethionine synthetase OS=Buchnera aphidi... [more]
METK_BORPE1.821e-3953.37S-adenosylmethionine synthetase OS=Bordetella pert... [more]
METK_BORPA1.821e-3953.37S-adenosylmethionine synthetase OS=Bordetella para... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004780_F08 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0003_IVF_F08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937436 ID=CK937436; Name=CK937436; organism=Citrus sinensis; type=EST; length=593bp
GGGGGCCCAAACTCAATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTA
AGTCTGAATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATA
AGATGGAGACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCC
GACAAGTTGTGCGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGA
GCAGGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACA
TGGTCATGGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAG
AAGATTGTTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGT
GGGTCTTGACGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAA
GCCCGGATATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAG
GACATTGGTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGA
GACCTCTGAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTG
CTCGTCTCACGGAGGTTAGGAAGAATAGTACCTGNNNTTGGCT
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