CK937436

Overview
NameCK937436
Unique NameCK937436
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length593
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_BORBR (S-adenosylmethionine synthetase OS=Bordetella bronchiseptica GN=metK PE=3 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 1.821e-39
Identity = 87/163 (53.37%), Postives = 109/163 (66.87%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI---GAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            FLFTSESV+EGHPDK+ DQISDA+LDA   QDP ++VA ET   T +V++ GEITT A VDY ++ RDT R IG+ + + G+D   C VLV  ++QSPDIAQGV     +  ED    GAGDQG MFGYA DET + MP     A +L  R +E+RK+    W
Sbjct:    6 FLFTSESVSEGHPDKVADQISDAILDAIFTQDPNARVAAETLCNTGLVVLAGEITTTANVDYIQVARDTIRHIGYDNTEYGIDYKGCAVLVAYDKQSPDIAQGV----DRSSEDYLNQGAGDQGLMFGYACDETPDLMPAPIWYAHRLVQRQSELRKDGRLPW 164          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_BIFLI (S-adenosylmethionine synthetase OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=metK PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 1.821e-39
Identity = 89/163 (54.60%), Postives = 108/163 (66.26%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV---------HGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 576
            L ++ESV EGHPDK+CDQISDA+LD  L QDP S VA ET   T + +VFGE+T+K   D +  VR+T R+IG+ S +VGLDAD C V+V I +QS +I QGV              +R E  GAGDQG MFGYATDET   MPL   LA +L  RLTEVRK+
Sbjct:    7 LISAESVTEGHPDKVCDQISDAILDDLLVQDPSSHVAVETSAATGVFLVFGEVTSKGYCDVQSKVRETLRNIGYTSSEVGLDADSCGVVVAITEQSAEINQGVARLTGDQETAASREERYEAQGAGDQGVMFGYATDETPTLMPLPIYLAHRLAFRLTEVRKS 169          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_AZOSB (S-adenosylmethionine synthetase OS=Azoarcus sp. (strain BH72) GN=metK PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 1.821e-39
Identity = 85/160 (53.12%), Postives = 106/160 (66.25%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            FLFTSESV+EGHPDK+ DQISD VLDA L +DP+++VACET   T +V++ GEITT A  +Y +I +D  R IG+ + D+G D   C VL  I +QS DIAQGV+        D GAGDQG MFGYAT+ET   MPL    A ++  R  EVRK+    W
Sbjct:    5 FLFTSESVSEGHPDKVADQISDGVLDAILAEDPKARVACETLVSTGLVVISGEITTSAHPNYREIAQDVVRRIGYDNSDIGFDYKSCAVLAAINRQSSDIAQGVN-EGEGLDLDQGAGDQGLMFGYATNETPSLMPLPIYYAHRIMQRQAEVRKDGRLPW 163          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_PSEFS (S-adenosylmethionine synthetase OS=Pseudomonas fluorescens (strain SBW25) GN=metK PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.378e-39
Identity = 86/162 (53.09%), Postives = 106/162 (65.43%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            E  LFTSESV+EGHPDK+ DQISDAVLDA + +D  ++VACET  KT + ++ GE+TT A VD E+IVRD    IG+ S DVG D   C V+  I +QSPDI QGV      +PED GAGDQG MFGYA++ET   MP     + +L  R  E RK+    W
Sbjct:    3 EYSLFTSESVSEGHPDKIADQISDAVLDAIIAEDKFARVACETLVKTGVAIIAGEVTTTAWVDLEQIVRDVITDIGYTSSDVGFDGATCGVMNIIGKQSPDINQGVD---RAKPEDQGAGDQGLMFGYASNETDVLMPAPITFSHQLVQRQAEARKSGLLPW 161          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_MARAV (S-adenosylmethionine synthetase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=metK PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.378e-39
Identity = 86/159 (54.09%), Postives = 105/159 (66.04%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            +FTSESV+EGHPDKL DQISDAVLDA L  DP ++VACET  KT + +V GEITT A VD E +VR   + I + S +VG D D C V+  I +QS DIAQGV     ++PED GAGDQG MFGYA++ET   MP     + +L  R  E RK+    W
Sbjct:    6 IFTSESVSEGHPDKLADQISDAVLDAILTDDPHARVACETMVKTGVAIVGGEITTSAWVDLEDLVRGVIKDIDYTSSEVGYDGDTCGVINIIGKQSVDIAQGVD---RQKPEDQGAGDQGLMFGYASNETDVLMPAPITFSHRLVQRQAEARKSGLLPW 161          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_LEPBL (S-adenosylmethionine synthetase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=metK PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.378e-39
Identity = 84/162 (51.85%), Postives = 113/162 (69.75%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV---HGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNS 579
            ++ F+FTSESV EGHPDK+CDQISDA+LDA LEQDP+S+VACET   TN+V++ GEIT+K KVD ++I R+  R IG+    +G DAD   V  ++  QSPDI+QGV    G F ++    GAGDQG MFG+A +ET EFMP+    + +L   L  +R ++
Sbjct:    3 LKDFIFTSESVGEGHPDKVCDQISDAILDAYLEQDPKSRVACETLATTNLVVIAGEITSKGKVDAQEIARNVIRDIGYNDITMGFDADFAVVSAHVHAQSPDISQGVTEGEGLFKEQ----GAGDQGLMFGFAINETPEFMPMPIYYSHELVKHLAGLRHSN 160          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_LEPBJ (S-adenosylmethionine synthetase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=metK PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.378e-39
Identity = 84/162 (51.85%), Postives = 113/162 (69.75%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV---HGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNS 579
            ++ F+FTSESV EGHPDK+CDQISDA+LDA LEQDP+S+VACET   TN+V++ GEIT+K KVD ++I R+  R IG+    +G DAD   V  ++  QSPDI+QGV    G F ++    GAGDQG MFG+A +ET EFMP+    + +L   L  +R ++
Sbjct:    3 LKDFIFTSESVGEGHPDKVCDQISDAILDAYLEQDPKSRVACETLATTNLVVIAGEITSKGKVDAQEIARNVIRDIGYNDITMGFDADFAVVSAHVHAQSPDISQGVTEGEGLFKEQ----GAGDQGLMFGFAINETPEFMPMPIYYSHELVKHLAGLRHSN 160          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_LACJO (S-adenosylmethionine synthetase OS=Lactobacillus johnsonii GN=metK PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.378e-39
Identity = 85/172 (49.42%), Postives = 110/172 (63.95%), Query Frame = 1
Query:  100 KMETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            K E  LFTSESV+EGHPDK+ DQISDA+LDA L +DP+ +VACET   T +V+V GEI+T A VD + +VR T   IG+   ++G D ++C +LV+I++QS DIA GV+     R         + IGAGDQG MFG+A  ET E MPL   LA  L  R+  +RK     W
Sbjct:    2 KKEKRLFTSESVSEGHPDKVADQISDAILDAILAKDPDGRVACETTVTTGLVLVVGEISTSAYVDIQSVVRKTILEIGYNRPELGFDGNNCAILVDIDEQSSDIADGVNESLETRENQQDKDDLDKIGAGDQGLMFGFAIKETPELMPLPISLAHSLMRRVASLRKEGRLDW 173          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_ACAM1 (S-adenosylmethionine synthetase OS=Acaryochloris marina (strain MBIC 11017) GN=metK PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.378e-39
Identity = 86/161 (53.42%), Postives = 106/161 (65.84%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED-------IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRK 573
            +LFTSESV EGHPDK+CDQISD +LDA L QDP S+VA E    T +V++ GEITTKA+V++  +VR     IG+   D G  A+ C VLV +++QSPDIAQGV      R E        IGAGDQG MFG+A +ET E MPL   LA ++  RL  VRK
Sbjct:    5 YLFTSESVTEGHPDKVCDQISDTILDALLSQDPASRVAAEVVVNTGLVLLTGEITTKAQVNFVDLVRQKITEIGYTDSDNGFAANSCSVLVALDEQSPDIAQGVDSAQETREEKSDQELDAIGAGDQGLMFGFACNETPELMPLPISLAHRVTRRLAAVRK 165          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_STRGG (S-adenosylmethionine synthetase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=metK PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.106e-39
Identity = 91/167 (54.49%), Postives = 105/167 (62.87%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPE-------DIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNST 582
            M   LFTSESV EGHPDK+ DQISD +LDA L +DP S+VA ET   T +V V GE+TTKA  D   +VR+    IG+ S   G D   C V V+I  QSPDIAQGV   + KR E         GAGDQG MFGYA DET E MPL   +A +L  RL+EVRKN T
Sbjct:    1 MSRRLFTSESVTEGHPDKIADQISDTILDALLREDPTSRVAVETLITTGLVHVAGEVTTKAYADIPNLVRNKVLEIGYDSSKKGFDGASCGVSVSIGAQSPDIAQGVDTAYEKRVEGDEDELDKQGAGDQGLMFGYACDETPELMPLPIHVAHRLSRRLSEVRKNGT 167          
The following BLAST results are available for this feature:
BLAST of CK937436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_BORBR1.821e-3953.37S-adenosylmethionine synthetase OS=Bordetella bron... [more]
METK_BIFLI1.821e-3954.60S-adenosylmethionine synthetase OS=Bifidobacterium... [more]
METK_AZOSB1.821e-3953.13S-adenosylmethionine synthetase OS=Azoarcus sp. (s... [more]
METK_PSEFS2.378e-3953.09S-adenosylmethionine synthetase OS=Pseudomonas flu... [more]
METK_MARAV2.378e-3954.09S-adenosylmethionine synthetase OS=Marinobacter aq... [more]
METK_LEPBL2.378e-3951.85S-adenosylmethionine synthetase OS=Leptospira borg... [more]
METK_LEPBJ2.378e-3951.85S-adenosylmethionine synthetase OS=Leptospira borg... [more]
METK_LACJO2.378e-3949.42S-adenosylmethionine synthetase OS=Lactobacillus j... [more]
METK_ACAM12.378e-3953.42S-adenosylmethionine synthetase OS=Acaryochloris m... [more]
METK_STRGG3.106e-3954.49S-adenosylmethionine synthetase OS=Streptomyces gr... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004780_F08 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0003_IVF_F08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937436 ID=CK937436; Name=CK937436; organism=Citrus sinensis; type=EST; length=593bp
GGGGGCCCAAACTCAATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTA
AGTCTGAATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATA
AGATGGAGACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCC
GACAAGTTGTGCGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGA
GCAGGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACA
TGGTCATGGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAG
AAGATTGTTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGT
GGGTCTTGACGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAA
GCCCGGATATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAG
GACATTGGTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGA
GACCTCTGAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTG
CTCGTCTCACGGAGGTTAGGAAGAATAGTACCTGNNNTTGGCT
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