CK937436

Overview
NameCK937436
Unique NameCK937436
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length593
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_HAEI8 (S-adenosylmethionine synthetase OS=Haemophilus influenzae (strain 86-028NP) GN=metK PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.056e-39
Identity = 86/163 (52.76%), Postives = 106/163 (65.03%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            M ++LFTSESV+EGHPDK+ DQISDAVLD  L+QDP+++VACET  KT M +V GEITT A VD E + R     IG+   ++G D   C VL  I +QS DI QGV     + P D GAGDQG MFGYAT+ET   MP +   A +L  +  EVRK+    W
Sbjct:    1 MSSYLFTSESVSEGHPDKIADQISDAVLDEILKQDPKARVACETYVKTGMALVGGEITTSAWVDIENLTRKVICDIGYEHSEMGFDGHSCAVLNAIGKQSADINQGVD---RENPLDQGAGDQGIMFGYATNETDVLMPAAITYAHRLMEKQAEVRKSGKLAW 160          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_DECAR (S-adenosylmethionine synthetase OS=Dechloromonas aromatica (strain RCB) GN=metK PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.056e-39
Identity = 84/163 (51.53%), Postives = 107/163 (65.64%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            M  +LFTSESV EGHPDK+ DQISDA+LDA L QD  S+VA ET   T +V++ GEITT A VDY ++ RDT + IG+ + + G+D   C VLV  ++QSPDIAQGV+  +       GAGDQG MFGYA DET   MPL   L+ ++  R   +RK+    W
Sbjct:    1 MSDYLFTSESVGEGHPDKVADQISDAILDAILAQDKHSRVAAETLCNTGLVVLAGEITTNANVDYIQVARDTIKRIGYDNTEYGIDYKGCAVLVAYDKQSPDIAQGVNAAYDDNLGQ-GAGDQGLMFGYACDETPSLMPLPIYLSHRMVERQAMLRKDGRLPW 162          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_CYAP4 (S-adenosylmethionine synthetase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=metK PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.056e-39
Identity = 84/163 (51.53%), Postives = 110/163 (67.48%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP-------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRK 573
            + +LFTSESV EGHPDK+CDQISD +LDA L QDP+S+VA E    T +V++ GEIT++A+V+Y  +VR     IG+ S + G  A  C VLV +++QSPDIAQGV+     R        + IGAGDQG MFG+A +ET EFMPL   LA ++  +L  VRK
Sbjct:    3 QRYLFTSESVTEGHPDKICDQISDTILDALLSQDPQSRVAAEVVVNTGLVLITGEITSQAQVNYVDLVRKKITEIGYTSAENGFCATSCAVLVALDEQSPDIAQGVNVAQESRQQLSDEALDRIGAGDQGIMFGFACNETPEFMPLPISLAHRMARKLAAVRK 165          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_THET8 (S-adenosylmethionine synthetase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=metK PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 5.298e-39
Identity = 89/160 (55.62%), Postives = 106/160 (66.25%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKR------PED-IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRK 573
            L TSESV EGHPDKL D+ISDA+LDA + QD +++VA ET   T +V V GEITT+  VD   +VR T R +G+     G DAD C VL  I++QSPDIA GV+  +  R      P D +GAGDQG MFGYATDET E MPL   LA +L  RL EVRK
Sbjct:    6 LVTSESVTEGHPDKLADRISDAILDALIAQDKKARVAAETLVTTGLVFVAGEITTEGYVDIPNLVRKTVREVGYTRAKYGFDADTCAVLTAIDEQSPDIAGGVNLSYEWRVLKSTDPLDRVGAGDQGLMFGYATDETPELMPLPITLAHRLTMRLAEVRK 165          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_THET2 (S-adenosylmethionine synthetase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=metK PE=3 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 5.298e-39
Identity = 89/160 (55.62%), Postives = 106/160 (66.25%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKR------PED-IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRK 573
            L TSESV EGHPDKL D+ISDA+LDA + QD +++VA ET   T +V V GEITT+  VD   +VR T R +G+     G DAD C VL  I++QSPDIA GV+  +  R      P D +GAGDQG MFGYATDET E MPL   LA +L  RL EVRK
Sbjct:    6 LVTSESVTEGHPDKLADRISDAILDALIAQDKKARVAAETLVTTGLVFVAGEITTEGYVDIPNLVRKTVREVGYTRAKYGFDADTCAVLTAIDEQSPDIAGGVNLSYEWRVLKSTDPLDRVGAGDQGLMFGYATDETPELMPLPITLAHRLTMRLAEVRK 165          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_STRZT (S-adenosylmethionine synthetase OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=metK PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 5.298e-39
Identity = 89/164 (54.27%), Postives = 111/164 (67.68%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH------GHFTKRPED-IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 576
            E  LFTSESV+EGHPDK+ DQISDA+LDA L +DPE+ VA ET   T  V VFGEI+T A VD  ++VRDT   IG+ + + G  A+   V  ++ +QSPDIAQGV+      G+  + P D IGAGDQG MFG+A DET E MPL   L+ KL  RL E+RK+
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAKDPEAHVAAETAVYTGSVHVFGEISTNAYVDINRVVRDTIAEIGYTNTEYGFSAETVGVHPSLVEQSPDIAQGVNEALEVRGNADQDPLDLIGAGDQGLMFGFAVDETEELMPLPIALSHKLVRRLAELRKS 166          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_STRZP (S-adenosylmethionine synthetase OS=Streptococcus pneumoniae (strain P1031) GN=metK PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 5.298e-39
Identity = 89/164 (54.27%), Postives = 111/164 (67.68%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH------GHFTKRPED-IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 576
            E  LFTSESV+EGHPDK+ DQISDA+LDA L +DPE+ VA ET   T  V VFGEI+T A VD  ++VRDT   IG+ + + G  A+   V  ++ +QSPDIAQGV+      G+  + P D IGAGDQG MFG+A DET E MPL   L+ KL  RL E+RK+
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAKDPEAHVAAETAVYTGSVHVFGEISTNAYVDINRVVRDTIAEIGYTNTEYGFSAETVGVHPSLVEQSPDIAQGVNEALEVRGNADQDPLDLIGAGDQGLMFGFAVDETEELMPLPIALSHKLVRRLAELRKS 166          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_STRZJ (S-adenosylmethionine synthetase OS=Streptococcus pneumoniae (strain JJA) GN=metK PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 5.298e-39
Identity = 89/164 (54.27%), Postives = 111/164 (67.68%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH------GHFTKRPED-IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 576
            E  LFTSESV+EGHPDK+ DQISDA+LDA L +DPE+ VA ET   T  V VFGEI+T A VD  ++VRDT   IG+ + + G  A+   V  ++ +QSPDIAQGV+      G+  + P D IGAGDQG MFG+A DET E MPL   L+ KL  RL E+RK+
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAKDPEAHVAAETAVYTGSVHVFGEISTNAYVDINRVVRDTIAEIGYTNTEYGFSAETVGVHPSLVEQSPDIAQGVNEALEVRGNADQDPLDLIGAGDQGLMFGFAVDETEELMPLPIALSHKLVRRLAELRKS 166          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_STRR6 (S-adenosylmethionine synthetase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=metK PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 5.298e-39
Identity = 89/164 (54.27%), Postives = 111/164 (67.68%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH------GHFTKRPED-IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 576
            E  LFTSESV+EGHPDK+ DQISDA+LDA L +DPE+ VA ET   T  V VFGEI+T A VD  ++VRDT   IG+ + + G  A+   V  ++ +QSPDIAQGV+      G+  + P D IGAGDQG MFG+A DET E MPL   L+ KL  RL E+RK+
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAKDPEAHVAAETAVYTGSVHVFGEISTNAYVDINRVVRDTIAEIGYTNTEYGFSAETVGVHPSLVEQSPDIAQGVNEALEVRGNADQDPLDLIGAGDQGLMFGFAVDETEELMPLPIALSHKLVRRLAELRKS 166          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_STRPS (S-adenosylmethionine synthetase OS=Streptococcus pneumoniae (strain CGSP14) GN=metK PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 5.298e-39
Identity = 89/164 (54.27%), Postives = 111/164 (67.68%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH------GHFTKRPED-IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 576
            E  LFTSESV+EGHPDK+ DQISDA+LDA L +DPE+ VA ET   T  V VFGEI+T A VD  ++VRDT   IG+ + + G  A+   V  ++ +QSPDIAQGV+      G+  + P D IGAGDQG MFG+A DET E MPL   L+ KL  RL E+RK+
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAKDPEAHVAAETAVYTGSVHVFGEISTNAYVDINRVVRDTIAEIGYTNTEYGFSAETVGVHPSLVEQSPDIAQGVNEALEVRGNADQDPLDLIGAGDQGLMFGFAVDETEELMPLPIALSHKLVRRLAELRKS 166          
The following BLAST results are available for this feature:
BLAST of CK937436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_HAEI84.056e-3952.76S-adenosylmethionine synthetase OS=Haemophilus inf... [more]
METK_DECAR4.056e-3951.53S-adenosylmethionine synthetase OS=Dechloromonas a... [more]
METK_CYAP44.056e-3951.53S-adenosylmethionine synthetase OS=Cyanothece sp. ... [more]
METK_THET85.298e-3955.63S-adenosylmethionine synthetase OS=Thermus thermop... [more]
METK_THET25.298e-3955.63S-adenosylmethionine synthetase OS=Thermus thermop... [more]
METK_STRZT5.298e-3954.27S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_STRZP5.298e-3954.27S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_STRZJ5.298e-3954.27S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_STRR65.298e-3954.27S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_STRPS5.298e-3954.27S-adenosylmethionine synthetase OS=Streptococcus p... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004780_F08 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0003_IVF_F08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937436 ID=CK937436; Name=CK937436; organism=Citrus sinensis; type=EST; length=593bp
GGGGGCCCAAACTCAATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTA
AGTCTGAATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATA
AGATGGAGACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCC
GACAAGTTGTGCGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGA
GCAGGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACA
TGGTCATGGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAG
AAGATTGTTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGT
GGGTCTTGACGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAA
GCCCGGATATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAG
GACATTGGTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGA
GACCTCTGAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTG
CTCGTCTCACGGAGGTTAGGAAGAATAGTACCTGNNNTTGGCT
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