CK937436

Overview
NameCK937436
Unique NameCK937436
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length593
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_STRPN (S-adenosylmethionine synthetase OS=Streptococcus pneumoniae GN=metK PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 5.298e-39
Identity = 89/164 (54.27%), Postives = 111/164 (67.68%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH------GHFTKRPED-IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 576
            E  LFTSESV+EGHPDK+ DQISDA+LDA L +DPE+ VA ET   T  V VFGEI+T A VD  ++VRDT   IG+ + + G  A+   V  ++ +QSPDIAQGV+      G+  + P D IGAGDQG MFG+A DET E MPL   L+ KL  RL E+RK+
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAKDPEAHVAAETAVYTGSVHVFGEISTNAYVDINRVVRDTIAEIGYTNTEYGFSAETVGVHPSLVEQSPDIAQGVNEALEVRGNADQDPLDLIGAGDQGLMFGFAVDETEELMPLPIALSHKLVRRLAELRKS 166          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_STRPJ (S-adenosylmethionine synthetase OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=metK PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 5.298e-39
Identity = 89/164 (54.27%), Postives = 111/164 (67.68%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH------GHFTKRPED-IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 576
            E  LFTSESV+EGHPDK+ DQISDA+LDA L +DPE+ VA ET   T  V VFGEI+T A VD  ++VRDT   IG+ + + G  A+   V  ++ +QSPDIAQGV+      G+  + P D IGAGDQG MFG+A DET E MPL   L+ KL  RL E+RK+
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAKDPEAHVAAETAVYTGSVHVFGEISTNAYVDINRVVRDTIAEIGYTNTEYGFSAETVGVHPSLVEQSPDIAQGVNEALEVRGNADQDPLDLIGAGDQGLMFGFAVDETEELMPLPIALSHKLVRRLAELRKS 166          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_STRPI (S-adenosylmethionine synthetase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=metK PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 5.298e-39
Identity = 89/164 (54.27%), Postives = 111/164 (67.68%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH------GHFTKRPED-IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 576
            E  LFTSESV+EGHPDK+ DQISDA+LDA L +DPE+ VA ET   T  V VFGEI+T A VD  ++VRDT   IG+ + + G  A+   V  ++ +QSPDIAQGV+      G+  + P D IGAGDQG MFG+A DET E MPL   L+ KL  RL E+RK+
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAKDPEAHVAAETAVYTGSVHVFGEISTNAYVDINRVVRDTIAEIGYTNTEYGFSAETVGVHPSLVEQSPDIAQGVNEALEVRGNADQDPLDLIGAGDQGLMFGFAVDETEELMPLPIALSHKLVRRLAELRKS 166          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_STRP7 (S-adenosylmethionine synthetase OS=Streptococcus pneumoniae (strain 70585) GN=metK PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 5.298e-39
Identity = 89/164 (54.27%), Postives = 111/164 (67.68%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH------GHFTKRPED-IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 576
            E  LFTSESV+EGHPDK+ DQISDA+LDA L +DPE+ VA ET   T  V VFGEI+T A VD  ++VRDT   IG+ + + G  A+   V  ++ +QSPDIAQGV+      G+  + P D IGAGDQG MFG+A DET E MPL   L+ KL  RL E+RK+
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAKDPEAHVAAETAVYTGSVHVFGEISTNAYVDINRVVRDTIAEIGYTNTEYGFSAETVGVHPSLVEQSPDIAQGVNEALEVRGNADQDPLDLIGAGDQGLMFGFAVDETEELMPLPIALSHKLVRRLAELRKS 166          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_STRP4 (S-adenosylmethionine synthetase OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=metK PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 5.298e-39
Identity = 89/164 (54.27%), Postives = 111/164 (67.68%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH------GHFTKRPED-IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 576
            E  LFTSESV+EGHPDK+ DQISDA+LDA L +DPE+ VA ET   T  V VFGEI+T A VD  ++VRDT   IG+ + + G  A+   V  ++ +QSPDIAQGV+      G+  + P D IGAGDQG MFG+A DET E MPL   L+ KL  RL E+RK+
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAKDPEAHVAAETAVYTGSVHVFGEISTNAYVDINRVVRDTIAEIGYTNTEYGFSAETVGVHPSLVEQSPDIAQGVNEALEVRGNADQDPLDLIGAGDQGLMFGFAVDETEELMPLPIALSHKLVRRLAELRKS 166          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_STRP2 (S-adenosylmethionine synthetase OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=metK PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 5.298e-39
Identity = 89/164 (54.27%), Postives = 111/164 (67.68%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH------GHFTKRPED-IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 576
            E  LFTSESV+EGHPDK+ DQISDA+LDA L +DPE+ VA ET   T  V VFGEI+T A VD  ++VRDT   IG+ + + G  A+   V  ++ +QSPDIAQGV+      G+  + P D IGAGDQG MFG+A DET E MPL   L+ KL  RL E+RK+
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAKDPEAHVAAETAVYTGSVHVFGEISTNAYVDINRVVRDTIAEIGYTNTEYGFSAETVGVHPSLVEQSPDIAQGVNEALEVRGNADQDPLDLIGAGDQGLMFGFAVDETEELMPLPIALSHKLVRRLAELRKS 166          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_LARHH (S-adenosylmethionine synthetase OS=Laribacter hongkongensis (strain HLHK9) GN=metK PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 5.298e-39
Identity = 86/164 (52.44%), Postives = 108/164 (65.85%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH-GHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            M  +LFTSESV+EGHPDK+ DQISDA+LDA L QD  ++VA ET   T +V++ GEITT A VDY  + R+T + IG+ + D+G DA  C VLV  ++QSPDIAQGV+ G      +  GAGDQG MFGYA DET   MP     A +L  R  E+RK+    W
Sbjct:    1 MSEYLFTSESVSEGHPDKVADQISDAILDAILTQDKHARVAAETLVNTGLVVLAGEITTHANVDYIHVARETIKRIGYNTSDLGFDAKGCAVLVGYDKQSPDIAQGVNEGQGIDLNQ--GAGDQGLMFGYACDETPTLMPFPIYYAHRLVQRQAELRKDGRLPW 162          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_DIAST (S-adenosylmethionine synthetase OS=Diaphorobacter sp. (strain TPSY) GN=metK PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 5.298e-39
Identity = 85/155 (54.84%), Postives = 107/155 (69.03%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 576
            FLFTSESV+EGHPDK+ DQISDA+LDA   QDP S+VA ET T T +V++ GEITT A VDY ++ RDT + IG+ + + G+D   C VLV  ++QS DIAQGV  H +    + GAGDQG MFGYA DET E MP     A +L  R  ++RK+
Sbjct:    5 FLFTSESVSEGHPDKVADQISDAILDAIFTQDPRSRVAAETLTNTGLVVLAGEITTNAHVDYIQVARDTIKRIGYDNTEYGIDYKGCAVLVAYDKQSNDIAQGV-DHASDDHLNTGAGDQGLMFGYACDETPELMPAPIYYAHRLVERQAQLRKD 158          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_DESVM (S-adenosylmethionine synthetase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=metK PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 5.298e-39
Identity = 85/155 (54.84%), Postives = 103/155 (66.45%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 576
            + FTSESV EGHPDK+ DQISDAVLD  L QDP S+VACET   T M  + GEI TK   D  ++VR T R+IG+ S ++G D   C V+ +I++QS DIAQGV       PED GAGDQG MFG+A DET   MP     A +L  RLT+VRK+
Sbjct:    8 YFFTSESVTEGHPDKVADQISDAVLDVLLAQDPMSRVACETLVTTGMAFIAGEIRTKGFADLPEVVRSTIRNIGYNSSEMGFDWKTCAVISSIDKQSGDIAQGVD---RGNPEDQGAGDQGMMFGFACDETPTLMPAPIYWAHQLSQRLTQVRKD 159          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_DESOH (S-adenosylmethionine synthetase OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=metK PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 5.298e-39
Identity = 87/159 (54.72%), Postives = 106/159 (66.67%), Query Frame = 1
Query:  109 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH---GHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 576
            T LFTSESV EGHPDK+ D ISDAVLDA + QD   +VACET   T +  + GEIT  A V++  IVRDT R IG+ S D+G D   C V+ +I++QSPDIAQGV+   G F ++    GAGDQG MFG+A DET E MP     A KL  +L +VRKN
Sbjct:    4 THLFTSESVTEGHPDKVADCISDAVLDALISQDKNCRVACETLVTTGVAFIAGEITANATVNFPDIVRDTIRRIGYTSSDMGFDWQTCSVVTSIDKQSPDIAQGVNEGDGLFKEQ----GAGDQGLMFGFACDETPELMPAPISYAHKLTKQLADVRKN 158          
The following BLAST results are available for this feature:
BLAST of CK937436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_STRPN5.298e-3954.27S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_STRPJ5.298e-3954.27S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_STRPI5.298e-3954.27S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_STRP75.298e-3954.27S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_STRP45.298e-3954.27S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_STRP25.298e-3954.27S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_LARHH5.298e-3952.44S-adenosylmethionine synthetase OS=Laribacter hong... [more]
METK_DIAST5.298e-3954.84S-adenosylmethionine synthetase OS=Diaphorobacter ... [more]
METK_DESVM5.298e-3954.84S-adenosylmethionine synthetase OS=Desulfovibrio v... [more]
METK_DESOH5.298e-3954.72S-adenosylmethionine synthetase OS=Desulfococcus o... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004780_F08 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0003_IVF_F08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937436 ID=CK937436; Name=CK937436; organism=Citrus sinensis; type=EST; length=593bp
GGGGGCCCAAACTCAATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTA
AGTCTGAATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATA
AGATGGAGACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCC
GACAAGTTGTGCGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGA
GCAGGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACA
TGGTCATGGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAG
AAGATTGTTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGT
GGGTCTTGACGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAA
GCCCGGATATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAG
GACATTGGTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGA
GACCTCTGAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTG
CTCGTCTCACGGAGGTTAGGAAGAATAGTACCTGNNNTTGGCT
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