CK937436

Overview
NameCK937436
Unique NameCK937436
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length593
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_THEEB (S-adenosylmethionine synthetase OS=Thermosynechococcus elongatus (strain BP-1) GN=metK PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 6.919e-39
Identity = 83/161 (51.55%), Postives = 108/161 (67.08%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP-------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRK 573
            +LF+SESV EGHPDK+CDQI+DA+LDA L QDP+S+VA E    T +V++ GEITTKA+V+Y  + R     IG+   + G  A+ C VLV +++QSPDIA+GV      R        + IGAGDQG MFGYA +ET E+MPL   LA ++  RL  VRK
Sbjct:    3 YLFSSESVTEGHPDKICDQIADAILDALLTQDPQSRVAAEVVVNTGLVLITGEITTKAQVNYVNLARQKIHEIGYTDANNGFAANSCAVLVALDEQSPDIARGVDTAQEAREQLSDAELDRIGAGDQGIMFGYACNETPEYMPLPISLAHRMARRLAAVRK 163          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_STRAW (S-adenosylmethionine synthetase OS=Streptomyces avermitilis GN=metK PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 6.919e-39
Identity = 91/167 (54.49%), Postives = 104/167 (62.28%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED-------IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNST 582
            M   LFTSESV EGHPDK+ DQISD +LDA L +DP S+VA ET   T +V V GE+TTKA     ++VRD    IG+ S   G D   C V V+I  QSPDIAQGV   +  R E         GAGDQG MFGYATDET   MPL   LA +L  RL+EVRKN T
Sbjct:    1 MSRRLFTSESVTEGHPDKIADQISDTILDALLREDPTSRVAVETLITTGLVHVAGEVTTKAYAPIAQLVRDKILEIGYDSSKKGFDGASCGVSVSIGSQSPDIAQGVDTAYENRVEGDEDELDRQGAGDQGLMFGYATDETPTLMPLPIHLAHRLSHRLSEVRKNGT 167          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_PSEPF (S-adenosylmethionine synthetase OS=Pseudomonas fluorescens (strain Pf0-1) GN=metK PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 6.919e-39
Identity = 87/162 (53.70%), Postives = 105/162 (64.81%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            E  LFTSESV+EGHPDK+ DQISDAVLDA + QD  ++VA ET  KT + +V GE+TT A VD E+IVRD    IG+ S DVG D   C V+  I +QSPDI QGV      +PED GAGDQG MFGYA++ET   MP     + +L  R  E RK+    W
Sbjct:    3 EYSLFTSESVSEGHPDKIADQISDAVLDAIIAQDKHARVAVETLVKTGVAIVAGEVTTSAWVDLEQIVRDVICDIGYTSSDVGFDGATCGVMNIIGKQSPDINQGVD---RAKPEDQGAGDQGLMFGYASNETDVLMPAPITFSHQLVQRQAEARKSGLLPW 161          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_PSEF5 (S-adenosylmethionine synthetase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=metK PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 6.919e-39
Identity = 87/162 (53.70%), Postives = 105/162 (64.81%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            E  LFTSESV+EGHPDK+ DQISDAVLDA + QD  ++VA ET  KT + +V GE+TT A VD E+IVRD    IG+ S DVG D   C V+  I +QSPDI QGV      +PED GAGDQG MFGYA++ET   MP     + +L  R  E RK+    W
Sbjct:    3 EYSLFTSESVSEGHPDKIADQISDAVLDAIIAQDKHARVAVETLVKTGVAIVAGEVTTSAWVDLEQIVRDVICDIGYTSSDVGFDGATCGVMNIIGKQSPDINQGVD---RAKPEDQGAGDQGLMFGYASNETEVLMPAPITFSHQLVQRQAEARKSGLLPW 161          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_JANMA (S-adenosylmethionine synthetase OS=Janthinobacterium sp. (strain Marseille) GN=metK PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 6.919e-39
Identity = 84/160 (52.50%), Postives = 109/160 (68.12%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            +LFTSESV+EGHPDK+ DQISDA+LDA  +QDP+++VA ET   T +V++ GEITT A VDY ++ R T + IG+ + D G+D   C VLV  ++QSPDIAQGV         D GAGDQG MFGYA DET E MP +   A ++  R +E+RK+    W
Sbjct:    5 YLFTSESVSEGHPDKVADQISDAILDAIFQQDPKARVAAETLCNTGLVVLAGEITTFANVDYIEVARQTIKRIGYDNADYGIDYKSCAVLVAYDKQSPDIAQGV-DEGAGIDLDQGAGDQGLMFGYACDETPELMPAAIHYAHRIVERQSELRKDGRLPW 163          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_CLAMS (S-adenosylmethionine synthetase OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=metK PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 6.919e-39
Identity = 87/160 (54.37%), Postives = 102/160 (63.75%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI--------GAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVR 570
            LFTSESV EGHPDK+CDQISD++LDA L QDP S+ A ET   T +V V GE+TT   VD  +IVRD  R IG+ S +VG D  +C V V+I  QSPDIAQGV   +  R            GAGDQG MFGYA+ +T  FMPL   LA +L  RL  VR
Sbjct:    6 LFTSESVTEGHPDKICDQISDSILDALLTQDPSSRAAVETLVTTGLVHVAGEVTTSGYVDIPQIVRDRIRDIGYDSSEVGFDGSNCGVTVSIGAQSPDIAQGVDRSYESRSGSASTDAHDLQGAGDQGLMFGYASRDTPVFMPLPIYLAHRLAERLAAVR 165          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_ACISJ (S-adenosylmethionine synthetase OS=Acidovorax sp. (strain JS42) GN=metK PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 6.919e-39
Identity = 85/155 (54.84%), Postives = 107/155 (69.03%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 576
            FLFTSESV+EGHPDK+ DQISDA+LDA   QDP S+VA ET T T +V++ GEITT A VDY ++ RDT + IG+ + + G+D   C VLV  ++QS DIAQGV  H +    + GAGDQG MFGYA DET E MP     A +L  R  ++RK+
Sbjct:    5 FLFTSESVSEGHPDKVADQISDAILDAIFTQDPRSRVAAETLTNTGLVVLAGEITTNAHVDYIQVARDTIQRIGYDNTEYGIDYKGCAVLVAYDKQSNDIAQGV-DHASDDHLNTGAGDQGLMFGYACDETPELMPAPIYYAHRLVERQAQLRKD 158          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK1_RHOPB (S-adenosylmethionine synthetase 1 OS=Rhodopseudomonas palustris (strain BisB18) GN=metK1 PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 6.919e-39
Identity = 79/163 (48.47%), Postives = 105/163 (64.42%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            M     TSESV EGHPDK+CDQISD +LDAC+ QDP S+VA ET    N+ ++ GEITT A++D E+  R   ++IG+    +G D+D C +L N+  QSPDI  GV      R +++GAGDQG  +GYA DET+  MP+   LA  L  RLT +R++ T  W
Sbjct:    1 MREHCVTSESVTEGHPDKVCDQISDGILDACVAQDPASRVAVETLVSGNIAVIAGEITTTAQIDAERTARAVIKAIGYDDPALGFDSDSCFILTNLRTQSPDINLGV-----SRGDELGAGDQGVFYGYACDETANLMPIPIALAHTLSLRLTMMRRDGTLPW 158          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_STRSV (S-adenosylmethionine synthetase OS=Streptococcus sanguinis (strain SK36) GN=metK PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 9.037e-39
Identity = 89/164 (54.27%), Postives = 111/164 (67.68%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH------GHFTKRPED-IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 576
            E  LFTSESV+EGHPDK+ DQISDA+LDA L QDP++ VA ET   T  V VFGEI+T A VD  ++VRDT   IG+ + + G  A+   V  ++ +QSPDIAQGV+      G+  + P D IGAGDQG MFG+A DET E MPL   L+ KL  RL E+RK+
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAVLSQDPDAHVAAETAVYTGSVHVFGEISTTAYVDINRVVRDTIAEIGYTNTEYGFSAETVGVHPSLVEQSPDIAQGVNEALEVRGNADQDPLDLIGAGDQGLMFGFAVDETPELMPLPISLSHKLVRRLAELRKS 166          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_STRGC (S-adenosylmethionine synthetase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=metK PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 9.037e-39
Identity = 89/164 (54.27%), Postives = 111/164 (67.68%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH------GHFTKRPED-IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 576
            E  LFTSESV+EGHPDK+ DQISDA+LDA L QDP++ VA ET   T  V VFGEI+T A VD  ++VRDT   IG+ + + G  A+   V  ++ +QSPDIAQGV+      G+  + P D IGAGDQG MFG+A DET E MPL   L+ KL  RL E+RK+
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAVLSQDPDAHVAAETAVYTGSVHVFGEISTTAYVDINRVVRDTIAEIGYTNTEYGFSAETVGVHPSLVEQSPDIAQGVNEALEVRGNADQDPLDLIGAGDQGLMFGFAVDETPELMPLPISLSHKLVRRLAELRKS 166          
The following BLAST results are available for this feature:
BLAST of CK937436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_THEEB6.919e-3951.55S-adenosylmethionine synthetase OS=Thermosynechoco... [more]
METK_STRAW6.919e-3954.49S-adenosylmethionine synthetase OS=Streptomyces av... [more]
METK_PSEPF6.919e-3953.70S-adenosylmethionine synthetase OS=Pseudomonas flu... [more]
METK_PSEF56.919e-3953.70S-adenosylmethionine synthetase OS=Pseudomonas flu... [more]
METK_JANMA6.919e-3952.50S-adenosylmethionine synthetase OS=Janthinobacteri... [more]
METK_CLAMS6.919e-3954.38S-adenosylmethionine synthetase OS=Clavibacter mic... [more]
METK_ACISJ6.919e-3954.84S-adenosylmethionine synthetase OS=Acidovorax sp. ... [more]
METK1_RHOPB6.919e-3948.47S-adenosylmethionine synthetase 1 OS=Rhodopseudomo... [more]
METK_STRSV9.037e-3954.27S-adenosylmethionine synthetase OS=Streptococcus s... [more]
METK_STRGC9.037e-3954.27S-adenosylmethionine synthetase OS=Streptococcus g... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004780_F08 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0003_IVF_F08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937436 ID=CK937436; Name=CK937436; organism=Citrus sinensis; type=EST; length=593bp
GGGGGCCCAAACTCAATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTA
AGTCTGAATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATA
AGATGGAGACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCC
GACAAGTTGTGCGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGA
GCAGGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACA
TGGTCATGGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAG
AAGATTGTTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGT
GGGTCTTGACGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAA
GCCCGGATATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAG
GACATTGGTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGA
GACCTCTGAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTG
CTCGTCTCACGGAGGTTAGGAAGAATAGTACCTGNNNTTGGCT
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