CK937436

Overview
NameCK937436
Unique NameCK937436
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length593
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1234 contig Csv1_Contig1234:147..738. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_STRCO (S-adenosylmethionine synthetase OS=Streptomyces coelicolor GN=metK PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.541e-38
Identity = 90/167 (53.89%), Postives = 103/167 (61.68%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED-------IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNST 582
            M   LFTSESV EGHPDK+ DQISD +LDA L +DP S+VA ET   T +V V GE+TTKA  D   +VR     IG+ S   G D   C V V+I  QSPDIAQGV   +  R E         GAGDQG MFGYA+DET   MPL   LA +L  RL+EVRKN T
Sbjct:    1 MSRRLFTSESVTEGHPDKIADQISDTILDALLREDPTSRVAVETLITTGLVHVAGEVTTKAYADIANLVRGKILEIGYDSSKKGFDGASCGVSVSIGAQSPDIAQGVDTAYENRVEGDEDELDRQGAGDQGLMFGYASDETPTLMPLPVFLAHRLSKRLSEVRKNGT 167          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_PETMO (S-adenosylmethionine synthetase OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=metK PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.541e-38
Identity = 87/172 (50.58%), Postives = 113/172 (65.70%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPE-----SKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHF---TKRPED----IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNST 582
            M+  LFTSESV EGHPDK+CDQISD +LDA LE++PE     ++ A ET     +V+V GE+ T A +D   +VR+T   IG+     G D + C V+ +IE+QSPDIA GV   F   +K  ED    IGAGDQG MFGYAT+ET  +MPL  +LA +L  RL +VRK++T
Sbjct:    1 MKKMLFTSESVTEGHPDKICDQISDTILDAILEKEPEENKMNARCAVETLVTRGLVVVTGEVRTSAYIDVPTLVRNTILDIGYNRAKFGFDGETCAVITSIEEQSPDIALGVDRSFEVKSKEKEDPFEKIGAGDQGIMFGYATNETDAYMPLPILLAHRLAKRLADVRKSNT 172          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_MARMS (S-adenosylmethionine synthetase OS=Marinomonas sp. (strain MWYL1) GN=metK PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.541e-38
Identity = 86/159 (54.09%), Postives = 105/159 (66.04%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNST 582
            E  LFTSESV+EGHPDK+ DQ+SDA+LDA L +DPE++VACET  KT MV+V GE+ T A VD E+I R   R IG+ S D+G D + C V+  I +QS DIA GV         + GAGDQG MFG+AT+ET   MP     A +L  R  EVRKN T
Sbjct:    3 EYSLFTSESVSEGHPDKIADQVSDAILDAILAEDPEARVACETLVKTGMVLVAGEVRTNAWVDIEEIARGVIREIGYNSSDMGFDWESCAVMNAIGKQSADIAVGVD---EAGEHEQGAGDQGLMFGFATNETDVLMPAPITYAHRLVQRQAEVRKNGT 158          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_DELAS (S-adenosylmethionine synthetase OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=metK PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.541e-38
Identity = 87/158 (55.06%), Postives = 107/158 (67.72%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED---IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 576
            FLFTSESV+EGHPDK+ DQISDA+LDA   QDP S+VA ET T T +V++ GEITT A VDY ++ RDT + IG+ + D G+D   C VLV  ++QS DIAQGV     K  +D    GAGDQG MFGYA DET E MP     A +L  R  ++RK+
Sbjct:    5 FLFTSESVSEGHPDKVADQISDAILDAIFAQDPYSRVAAETLTNTGLVVLAGEITTGANVDYIQVARDTIKRIGYDNTDYGIDYKGCAVLVAYDKQSQDIAQGV----DKASDDELNTGAGDQGLMFGYACDETPELMPAPIYYAHRLVERQAQLRKD 158          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_BURP8 (S-adenosylmethionine synthetase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=metK PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.541e-38
Identity = 85/160 (53.12%), Postives = 107/160 (66.88%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            +LFTSESV+EGHPDK+ DQISDA+LDA L QD  S+VA ET   T +V++ GEITT A VDY ++ R+T + IG+ + D G+D   C VLV  ++QSPDIAQGV         D GAGDQG MFGYA DET E MPL   L+ +L  R   +R++    W
Sbjct:    5 YLFTSESVSEGHPDKVADQISDAILDAILAQDKYSRVAAETLCNTGLVVLAGEITTTANVDYIQVARETIKRIGYDNTDYGIDYRGCAVLVAYDKQSPDIAQGVDRAHDNN-LDQGAGDQGLMFGYACDETPELMPLPIHLSHRLVERQANLRRDGRLPW 163          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_ACTPJ (S-adenosylmethionine synthetase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=metK PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.541e-38
Identity = 86/159 (54.09%), Postives = 103/159 (64.78%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            LFTSESV+EGHPDK+ DQISDAVLD  L+QDP+++VACET  KT M +V GEITT A VD E + R     IG+   D+G DA  C VL  I +QSPDI QGV       P + GAGDQG MFGYAT+ET   MP     A +L  +  +VRK+    W
Sbjct:    5 LFTSESVSEGHPDKIADQISDAVLDEILKQDPKARVACETYVKTGMALVGGEITTSAWVDIENLTRQVICDIGYTHSDMGFDAHSCAVLNAIGKQSPDINQGVD---RADPLEQGAGDQGIMFGYATNETEVLMPAPITYAHRLMEQQAKVRKSGKLDW 160          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_ACTP7 (S-adenosylmethionine synthetase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=metK PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.541e-38
Identity = 86/159 (54.09%), Postives = 103/159 (64.78%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            LFTSESV+EGHPDK+ DQISDAVLD  L+QDP+++VACET  KT M +V GEITT A VD E + R     IG+   D+G DA  C VL  I +QSPDI QGV       P + GAGDQG MFGYAT+ET   MP     A +L  +  +VRK+    W
Sbjct:    5 LFTSESVSEGHPDKIADQISDAVLDEILKQDPKARVACETYVKTGMALVGGEITTSAWVDIENLTRQVICDIGYTHSDMGFDAHSCAVLNAIGKQSPDINQGVD---RADPLEQGAGDQGIMFGYATNETEVLMPAPITYAHRLMEQQAKVRKSGKLDW 160          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_ACTP2 (S-adenosylmethionine synthetase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=metK PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.541e-38
Identity = 86/159 (54.09%), Postives = 103/159 (64.78%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            LFTSESV+EGHPDK+ DQISDAVLD  L+QDP+++VACET  KT M +V GEITT A VD E + R     IG+   D+G DA  C VL  I +QSPDI QGV       P + GAGDQG MFGYAT+ET   MP     A +L  +  +VRK+    W
Sbjct:    5 LFTSESVSEGHPDKIADQISDAVLDEILKQDPKARVACETYVKTGMALVGGEITTSAWVDIENLTRQVICDIGYTHSDMGFDAHSCAVLNAIGKQSPDINQGVD---RADPLEQGAGDQGIMFGYATNETDVLMPAPITYAHRLMEQQAKVRKSGKLDW 160          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_TRIEI (S-adenosylmethionine synthetase OS=Trichodesmium erythraeum (strain IMS101) GN=metK PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.013e-38
Identity = 83/161 (51.55%), Postives = 108/161 (67.08%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP-------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRK 573
            +LFTSESV EGHPDK+CDQISD ++DA L QDP+S+VA E    T +V++ GEITTKA+V+Y ++ R     IG+V  + G  AD C VLV +++QS DIAQGV      R        + +GAGDQG MFG+A +ET E MPL   LA ++  +LT VRK
Sbjct:    5 YLFTSESVTEGHPDKICDQISDTIIDAILAQDPQSRVAAEVVVNTGLVLITGEITTKAQVNYIELARKKIADIGYVHAENGFSADSCSVLVALDEQSADIAQGVDKAQETRELLSEEELDAVGAGDQGLMFGFACNETPELMPLPISLAHRVCRQLTAVRK 165          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_STRST (S-adenosylmethionine synthetase OS=Streptomyces spectabilis GN=metK PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.013e-38
Identity = 90/167 (53.89%), Postives = 104/167 (62.28%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED-------IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNST 582
            M   LFTSESV EGHPDK+ DQISD +LDA L +DP S+VA ET   T +V V GE+TTKA     ++VR+    IG+ S   G D   C V V+I  QSPDIAQGV   +  R E         GAGDQG MFGYA DET E MPL   LA +L  RL+EVRKN T
Sbjct:    1 MSRRLFTSESVTEGHPDKIADQISDTILDALLREDPTSRVAVETLITTGLVHVAGEVTTKAYAPIAQLVREKILEIGYDSSKKGFDGASCGVSVSIGAQSPDIAQGVDTAYESRVEGDEDELDRQGAGDQGLMFGYACDETPELMPLPIHLAHRLSRRLSEVRKNGT 167          
The following BLAST results are available for this feature:
BLAST of CK937436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_STRCO1.541e-3853.89S-adenosylmethionine synthetase OS=Streptomyces co... [more]
METK_PETMO1.541e-3850.58S-adenosylmethionine synthetase OS=Petrotoga mobil... [more]
METK_MARMS1.541e-3854.09S-adenosylmethionine synthetase OS=Marinomonas sp.... [more]
METK_DELAS1.541e-3855.06S-adenosylmethionine synthetase OS=Delftia acidovo... [more]
METK_BURP81.541e-3853.13S-adenosylmethionine synthetase OS=Burkholderia ph... [more]
METK_ACTPJ1.541e-3854.09S-adenosylmethionine synthetase OS=Actinobacillus ... [more]
METK_ACTP71.541e-3854.09S-adenosylmethionine synthetase OS=Actinobacillus ... [more]
METK_ACTP21.541e-3854.09S-adenosylmethionine synthetase OS=Actinobacillus ... [more]
METK_TRIEI2.013e-3851.55S-adenosylmethionine synthetase OS=Trichodesmium e... [more]
METK_STRST2.013e-3853.89S-adenosylmethionine synthetase OS=Streptomyces sp... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004780_F08 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0003_IVF_F08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937436 ID=CK937436; Name=CK937436; organism=Citrus sinensis; type=EST; length=593bp
GGGGGCCCAAACTCAATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTA
AGTCTGAATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATA
AGATGGAGACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCC
GACAAGTTGTGCGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGA
GCAGGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACA
TGGTCATGGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAG
AAGATTGTTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGT
GGGTCTTGACGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAA
GCCCGGATATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAG
GACATTGGTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGA
GACCTCTGAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTG
CTCGTCTCACGGAGGTTAGGAAGAATAGTACCTGNNNTTGGCT
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