CK937436

Overview
NameCK937436
Unique NameCK937436
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length593
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1234 contig Csv1_Contig1234:147..738. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_LEIIN (S-adenosylmethionine synthetase OS=Leishmania infantum GN=METK PE=2 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 8.419e-53
Identity = 104/163 (63.80%), Postives = 125/163 (76.69%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            + + LF+SE V EGHPDKLCDQ+SDAVLDACL  DP SKVACE+C KT MVMVFGEITTKA +DY+KIVR+T + IGF S D GLD + C VLV IEQQSPDI QG+ G+F    ED+GAGDQG MFGYATDET   MPL++ LA  L  + +E+R++ +  W
Sbjct:    3 VHSILFSSEHVTEGHPDKLCDQVSDAVLDACLAGDPFSKVACESCAKTGMVMVFGEITTKAVLDYQKIVRNTIKDIGFDSADKGLDYESCNVLVAIEQQSPDICQGL-GNFDS--EDLGAGDQGMMFGYATDETETLMPLTYELARGLAKKYSELRRSGSLEW 162          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_ASCIM (S-adenosylmethionine synthetase OS=Ascobolus immersus PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 7.127e-52
Identity = 99/161 (61.49%), Postives = 123/161 (76.40%), Query Frame = 1
Query:  109 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            +FLFTSESV EGHPDK+ DQ+SDAVLDACL +DP SKVACET TKT M+MVFGEITTKA +DY+KI+R+  + IG+     G D   C VLV IEQQSPDIAQG+  H+ K  E++GAGDQG MFGYATDET E +PL+ +LA +L A + + R++ +  W
Sbjct:   13 SFLFTSESVGEGHPDKIADQVSDAVLDACLAEDPLSKVACETATKTGMIMVFGEITTKAHLDYQKIIRNAVKDIGYDDSAKGFDYKTCNVLVAIEQQSPDIAQGL--HYEKALEELGAGDQGIMFGYATDETPELLPLTLLLAHQLNANMAKARRDGSLPW 171          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_NEUCR (S-adenosylmethionine synthetase OS=Neurospora crassa GN=eth-1 PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.588e-51
Identity = 98/161 (60.87%), Postives = 121/161 (75.16%), Query Frame = 1
Query:  109 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            TFLFTSESV EGHPDK+ DQ+SDA+LDACL +DP SKVACET TKT M+MVFGEITTKAK+DY+K+VR+  + IG+     G D   C +LV IE+QSPDIAQG+  H   R E++GAGDQG MFGYATDET E  PL+ + A KL A ++  R++ +  W
Sbjct:   16 TFLFTSESVGEGHPDKIADQVSDAILDACLAEDPLSKVACETATKTGMIMVFGEITTKAKLDYQKVVRNAIKDIGYDDSSKGFDYKTCNLLVAIEEQSPDIAQGL--HLDDRLENLGAGDQGIMFGYATDETPELFPLTLLFAHKLNAAMSAARRDGSLPW 174          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK1_CAEEL (Probable S-adenosylmethionine synthetase 1 OS=Caenorhabditis elegans GN=sams-1 PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.074e-51
Identity = 101/160 (63.12%), Postives = 120/160 (75.00%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            FLFTSESV+EGHPDK+CDQISDAVLDA L+QDP +KVACET TKT MVM+ GEIT+KA VDY+ +VR     IGF    +G D   C VLV +EQQSP+IA GV  H  K  ED+GAGDQG MFGYATDET E MPL+ +L+ K+ A L ++R+N T  W
Sbjct:    5 FLFTSESVSEGHPDKMCDQISDAVLDAHLKQDPNAKVACETVTKTGMVMLCGEITSKAVVDYQVLVRRVIEKIGFTDSSIGFDHKTCNVLVALEQQSPEIAAGV--HVNKDGEDVGAGDQGIMFGYATDETEETMPLTLILSHKINAELHKLRRNGTLPW 162          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK1_RAT (S-adenosylmethionine synthetase isoform type-1 OS=Rattus norvegicus GN=Mat1a PE=1 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 7.880e-51
Identity = 99/170 (58.24%), Postives = 122/170 (71.76%), Query Frame = 1
Query:   82 CQPQLDKMETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            C   L +   F+FTSESV EGHPDK+CDQISDAVLDA L+QDP +KVACET  KT MV++ GEIT+ A +DY+++VRDT + IG+     G D   C VLV +EQQSPDIAQ V  H  +  ED+GAGDQG MFGYATDET E MPL+ VLA KL  R+ ++R++    W
Sbjct:    9 CDHSLSEEGAFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSMAMIDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCV--HLDRNEEDVGAGDQGLMFGYATDETEECMPLTIVLAHKLNTRMADLRRSGVLPW 176          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK1_MOUSE (S-adenosylmethionine synthetase isoform type-1 OS=Mus musculus GN=Mat1a PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 7.880e-51
Identity = 100/170 (58.82%), Postives = 122/170 (71.76%), Query Frame = 1
Query:   82 CQPQLDKMETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            C   L +   F+FTSESV EGHPDK+CDQISDAVLDA L+QDP +KVACET  KT MV++ GEIT+ A VDY+++VRDT + IG+     G D   C VLV +EQQSPDIAQ V  H  +  ED+GAGDQG MFGYATDET E MPL+ VLA KL  R+ ++R++    W
Sbjct:    9 CDHSLSEEGAFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSVAMVDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCV--HLDRNEEDVGAGDQGLMFGYATDETEECMPLTIVLAHKLNTRIADLRRSGVLPW 176          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK1_BOVIN (S-adenosylmethionine synthetase isoform type-1 OS=Bos taurus GN=MAT1A PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.293e-50
Identity = 99/170 (58.24%), Postives = 123/170 (72.35%), Query Frame = 1
Query:   82 CQPQLDKMETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            C   L +   F+FTSESV EGHPDK+CDQISDAVLDA L+QDP +KVACET  KT MV++ GEIT+ A VDY+++VR+T + IG+     G D   C VLV +EQQSPDIAQ V  H  +  ED+GAGDQG MFGYATDET E MPL+ +LA +L AR+ E+R++    W
Sbjct:    9 CDHSLSEEGAFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSMAMVDYQRVVRETIQHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCV--HLDRNEEDVGAGDQGLMFGYATDETEECMPLTIMLAHRLNARMAELRRSGQLPW 176          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK1_HUMAN (S-adenosylmethionine synthetase isoform type-1 OS=Homo sapiens GN=MAT1A PE=1 SV=2)

HSP 1 Score: 197.978 bits (502), Expect = 2.994e-50
Identity = 98/160 (61.25%), Postives = 120/160 (75.00%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            F+FTSESV EGHPDK+CDQISDAVLDA L+QDP +KVACET  KT MV++ GEIT+ A VDY+++VRDT + IG+     G D   C VLV +EQQSPDIAQ V  H  +  ED+GAGDQG MFGYATDET E MPL+ +LA KL AR+ ++R++    W
Sbjct:   18 FMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSMAMVDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCV--HLDRNEEDVGAGDQGLMFGYATDETEECMPLTIILAHKLNARMADLRRSGLLPW 175          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_DROME (S-adenosylmethionine synthetase OS=Drosophila melanogaster GN=M(2)21AB PE=1 SV=2)

HSP 1 Score: 196.823 bits (499), Expect = 6.671e-50
Identity = 96/161 (59.63%), Postives = 121/161 (75.16%), Query Frame = 1
Query:  109 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            TFLFTSESV EGHPDK+CDQISDA+LDA L+QDP +KVACET  KT M+++ GEIT+KA VDY+K+VR+T + IG+     G D   C VL+ ++QQSP+IA GV  H  +  E+IGAGDQG MFGYATDET E MPL+ VLA KL  ++ E+R++    W
Sbjct:   28 TFLFTSESVGEGHPDKMCDQISDAILDAHLKQDPNAKVACETVAKTGMILLCGEITSKAVVDYQKVVRETVQHIGYDDSSKGFDFKTCNVLLALDQQSPEIAAGV--HVNRAEEEIGAGDQGIMFGYATDETEECMPLTVVLAHKLNEKIAELRRSDVFWW 186          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK4_CAEEL (Probable S-adenosylmethionine synthetase 4 OS=Caenorhabditis elegans GN=sams-4 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 7.376e-49
Identity = 97/160 (60.62%), Postives = 119/160 (74.38%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            FLFTSESV+EGHPDK+CDQISDAVLDA L QDP +KVACET TKT M+M+ GEIT+KA VDY+ +VR+  + IG+     G D   C VLV +EQQSP+IA GV  H  K  +D+GAGDQG MFGYATDET E MPL+ +L+ KL  +L E+R++    W
Sbjct:    6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGV--HVDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEW 163          
The following BLAST results are available for this feature:
BLAST of CK937436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_LEIIN8.419e-5363.80S-adenosylmethionine synthetase OS=Leishmania infa... [more]
METK_ASCIM7.127e-5261.49S-adenosylmethionine synthetase OS=Ascobolus immer... [more]
METK_NEUCR1.588e-5160.87S-adenosylmethionine synthetase OS=Neurospora cras... [more]
METK1_CAEEL2.074e-5163.13Probable S-adenosylmethionine synthetase 1 OS=Caen... [more]
METK1_RAT7.880e-5158.24S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK1_MOUSE7.880e-5158.82S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK1_BOVIN2.293e-5058.24S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK1_HUMAN2.994e-5061.25S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK_DROME6.671e-5059.63S-adenosylmethionine synthetase OS=Drosophila mela... [more]
METK4_CAEEL7.376e-4960.63Probable S-adenosylmethionine synthetase 4 OS=Caen... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004780_F08 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0003_IVF_F08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937436 ID=CK937436; Name=CK937436; organism=Citrus sinensis; type=EST; length=593bp
GGGGGCCCAAACTCAATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTA
AGTCTGAATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATA
AGATGGAGACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCC
GACAAGTTGTGCGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGA
GCAGGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACA
TGGTCATGGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAG
AAGATTGTTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGT
GGGTCTTGACGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAA
GCCCGGATATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAG
GACATTGGTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGA
GACCTCTGAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTG
CTCGTCTCACGGAGGTTAGGAAGAATAGTACCTGNNNTTGGCT
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