CK937412

Overview
NameCK937412
Unique NameCK937412
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length414
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937412 vs. ExPASy Swiss-Prot
Match: CAD8B_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8B OS=Oryza sativa subsp. japonica GN=CAD8B PE=3 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 2.176e-18
Identity = 47/137 (34.31%), Postives = 69/137 (50.36%), Query Frame = 3
Query:    3 IKNDKGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLG 413
            +KND G + YP+                 + F              CR C  C    E YC   + + N     G  TQGGF++++VV++ +V+++P G+ L+ AAPLLCAGVTV+SP+   GL   G   G++GLG
Sbjct:  127 VKNDWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVGVGFFVGSCRTCDSCGKGYENYCPTMVITSNGKDYGGAATQGGFSDAIVVNEHYVLRVPAGLPLDGAAPLLCAGVTVYSPMVIHGLNAPGKHVGVVGLG 263          
BLAST of CK937412 vs. ExPASy Swiss-Prot
Match: CADH4_ORYSJ (Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza sativa subsp. japonica GN=CAD4 PE=3 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 8.271e-18
Identity = 37/91 (40.66%), Postives = 61/91 (67.03%), Query Frame = 3
Query:  141 CRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLG 413
            C++C  C + +E +C+K + +YN V +DG  T+GG++  ++V Q++  KIP    L +AAPLLCAG+TV++P+    + Q G   G++GLG
Sbjct:  100 CQDCENCNSSLENHCSKCVVTYNSVDSDGTVTKGGYSSHILVHQRYCFKIPADYPLSKAAPLLCAGITVYTPMIRHNMNQPGKSLGVIGLG 190          
BLAST of CK937412 vs. ExPASy Swiss-Prot
Match: CAD8D_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8D OS=Oryza sativa subsp. japonica GN=CAD8D PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.411e-17
Identity = 48/137 (35.04%), Postives = 66/137 (48.18%), Query Frame = 3
Query:    3 IKNDKGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLG 413
            IKN+ G + YP+                 + F              CR C  C    E YC   + + N     G  TQGGF++ MVV Q +VV++P  +  + AAPLLCAGVTV+SP+  +GL   G   G++GLG
Sbjct:   52 IKNEWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVGVGYFVDSCRACDSCGKGYENYCPTMVITSNGTDYGGATTQGGFSDVMVVRQDYVVRVPASLPPDGAAPLLCAGVTVYSPMVEYGLNGPGKHLGVVGLG 188          
BLAST of CK937412 vs. ExPASy Swiss-Prot
Match: CADH9_ORYSJ (Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza sativa subsp. japonica GN=CAD9 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.842e-17
Identity = 49/143 (34.27%), Postives = 67/143 (46.85%), Query Frame = 3
Query:    3 IKNDKGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDG------MALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLG 413
            IKN+ G + YP+                 + F              CR C  C    E YC   + S+N    DG    GGF+E  VV+Q++VV+IP G        L++ APLLCAGVTV+ P+   GL + G+  G+ GLG
Sbjct:   52 IKNEWGNAKYPVVPGHEIVGVVAEVGSSVARFAAGDTVGVGYIASTCRACANCRDGFENYCAGLVPSFNAALPDGATVHGGFSELAVVNQRYVVRIPGGGGGASPAPLDRLAPLLCAGVTVYCPMRRLGLDRPGVHLGVAGLG 194          
BLAST of CK937412 vs. ExPASy Swiss-Prot
Match: CAD8A_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8A OS=Oryza sativa subsp. japonica GN=CAD8A PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.105e-17
Identity = 47/137 (34.31%), Postives = 66/137 (48.18%), Query Frame = 3
Query:    3 IKNDKGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLG 413
            IKN+ G + YP+                 + F              CR C  C    E YC   + + N     G  TQGGF++ MVV Q +V+++P  +  + AAPLLCAGVTV+SP+  +GL   G   G++GLG
Sbjct:   52 IKNEWGNAMYPVVPGHEIVGVVAGVGAGVTRFKAGDTVGVGYFVDSCRACDSCGKGDENYCPTMVITSNGTDYGGATTQGGFSDVMVVRQDYVLRVPASLPPDGAAPLLCAGVTVYSPMVEYGLNAPGKHLGVVGLG 188          
BLAST of CK937412 vs. ExPASy Swiss-Prot
Match: CADH1_ARATH (Probable cinnamyl alcohol dehydrogenase 1 OS=Arabidopsis thaliana GN=CAD1 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.361e-17
Identity = 43/136 (31.62%), Postives = 64/136 (47.06%), Query Frame = 3
Query:    6 KNDKGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLG 413
            +N  G S YP+                   F              CR C  C    E  C K ++++N +  DG  T+GG++  +VV +++  KIP    LE AAPLLCAG+TV++P+    + Q G   G++GLG
Sbjct:   56 RNQHGDSKYPLVPGHEIAGIVTKVGPNVQRFKVGDHVGVGTYVNSCRECEYCNEGQEVNCAKGVFTFNGIDHDGSVTKGGYSSHIVVHERYCYKIPVDYPLESAAPLLCAGITVYAPMMRHNMNQPGKSLGVIGLG 191          
BLAST of CK937412 vs. ExPASy Swiss-Prot
Match: MTDH3_STYHU (Probable mannitol dehydrogenase 3 OS=Stylosanthes humilis GN=CAD3 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.661e-16
Identity = 47/137 (34.31%), Postives = 69/137 (50.36%), Query Frame = 3
Query:    6 KNDKGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQ-AAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLG 413
            KND G S YP                    +              CR+C+ C  ++E YC K I +  D + DG  T GG+++SMVVD+ FV +IP+G+ L+   +  LC G +  SPL ++GL + GL  G++GLG
Sbjct:   59 KNDFGNSIYPYVPGHEVIGIVAEVGSKVEKYKVGDKVGVGYFVESCRSCQNCIDNLENYCPKHILTQGDKHIDGTTTYGGYSDSMVVDEHFVTRIPEGLPLDGCGSSSLCWGYS-HSPLKYYGLDKPGLHVGVVGLG 194          
BLAST of CK937412 vs. ExPASy Swiss-Prot
Match: ADHA_BACSU (Probable formaldehyde dehydrogenase adhA OS=Bacillus subtilis GN=adhA PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.661e-16
Identity = 40/92 (43.48%), Postives = 60/92 (65.22%), Query Frame = 3
Query:  141 CRNCRPCEADVEQYCNKKI-WSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLG 413
            C  C  C    EQ+C K +  +YN V  DG PT GG+++ +VV  +FVV+IPD + ++ A+PLLCAG+T +SPL H+ +   G +  I+G+G
Sbjct:   97 CGECEYCLNAEEQFCTKGVVQTYNSVDYDGNPTYGGYSQKIVVTDRFVVRIPDRLEMDVASPLLCAGITTYSPLKHWNV-GPGKKVAIVGVG 187          
BLAST of CK937412 vs. ExPASy Swiss-Prot
Match: CADH7_ORYSJ (Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa subsp. japonica GN=CAD7 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.741e-16
Identity = 40/100 (40.00%), Postives = 60/100 (60.00%), Query Frame = 3
Query:  141 CRNCRPCEADVEQYCNKKI-WSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDG--------MALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLG 413
            C  C  C    E YC+  + ++YN V  DG  T GG+++++VV Q+FVV+ P          + L+  APLLCAGVTV++P+   GL ++G   G++GLG
Sbjct:  113 CGGCESCRDGCENYCSGGVVFTYNSVDRDGTRTYGGYSDAVVVSQRFVVRFPSSAGGGAGAALPLDSGAPLLCAGVTVYAPMRQHGLCEAGKHVGVVGLG 212          
BLAST of CK937412 vs. ExPASy Swiss-Prot
Match: ADH6_YEAST (NADP-dependent alcohol dehydrogenase 6 OS=Saccharomyces cerevisiae GN=ADH6 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.018e-15
Identity = 41/91 (45.05%), Postives = 55/91 (60.44%), Query Frame = 3
Query:  141 CRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLG 413
            C  C  C+ D E YC K + +Y+  Y DG  +QGG+A  + V + FVV IP+ +    AAPLLC G+TV+SPL   G    G + GI+GLG
Sbjct:  100 CLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPLVRNGC-GPGKKVGIVGLG 189          
The following BLAST results are available for this feature:
BLAST of CK937412 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
CAD8B_ORYSJ2.176e-1834.31Probable cinnamyl alcohol dehydrogenase 8B OS=Oryz... [more]
CADH4_ORYSJ8.271e-1840.66Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza... [more]
CAD8D_ORYSJ1.411e-1735.04Probable cinnamyl alcohol dehydrogenase 8D OS=Oryz... [more]
CADH9_ORYSJ1.842e-1734.27Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza... [more]
CAD8A_ORYSJ4.105e-1734.31Probable cinnamyl alcohol dehydrogenase 8A OS=Oryz... [more]
CADH1_ARATH5.361e-1731.62Probable cinnamyl alcohol dehydrogenase 1 OS=Arabi... [more]
MTDH3_STYHU2.661e-1634.31Probable mannitol dehydrogenase 3 OS=Stylosanthes ... [more]
ADHA_BACSU2.661e-1643.48Probable formaldehyde dehydrogenase adhA OS=Bacill... [more]
CADH7_ORYSJ7.741e-1640.00Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa s... [more]
ADH6_YEAST5.018e-1545.05NADP-dependent alcohol dehydrogenase 6 OS=Saccharo... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004510_B04 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IF_B04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937412 ID=CK937412; Name=CK937412; organism=Citrus sinensis; type=EST; length=414bp
AAATAAAAAATGATAAGGGCATGTCTAACTATCCGATGGTTCCAGGACAT
GAGGTGGTGGGTGAAGTGAAGGAAGTGGGTTCAGAAGTGAGCAACTTTAA
AGTAGGAGATAAGGTTGGTGTTGGGGTTCTCGTTGGTTGTTGCAGAAACT
GCAGGCCGTGCGAGGCAGATGTTGAGCAGTACTGCAATAAGAAAATCTGG
TCCTATAACGATGTTTACACCGATGGCAAGCCTACACAAGGCGGCTTTGC
TGAGTCCATGGTCGTTGATCAAAAGTTTGTGGTGAAAATACCAGATGGGA
TGGCACTGGAGCAGGCGGCACCGCTATTGTGTGCTGGTGTGACAGTGTTC
AGTCCCCTGAGCCACTTTGGATTGAAGCAGAGCGGGCTGAGAGGAGGAAT
CTTGGGGCTCGGAG
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