CK937408
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937408 vs. ExPASy Swiss-Prot
Match: PSBK_ZYGCR (Photosystem II reaction center protein K OS=Zygnema circumcarinatum GN=psbK PE=3 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.532e-11 Identity = 36/58 (62.07%), Postives = 41/58 (70.69%), Query Frame = 2 Query: 86 MFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 259 MF L L S + + AKLPEAYA +PIVDV+PVIPV F LLAFVWQA+VSFR Sbjct: 1 MFDLYLKNLLDLSDSGTVVLAKLPEAYAIFDPIVDVLPVIPVFFLLLAFVWQASVSFR 58
BLAST of CK937408 vs. ExPASy Swiss-Prot
Match: PSBK_OLTVI (Photosystem II reaction center protein K OS=Oltmannsiellopsis viridis GN=psbK PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.532e-11 Identity = 33/42 (78.57%), Postives = 37/42 (88.10%), Query Frame = 2 Query: 134 SFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 259 S L AKLPEAYA +PIVDV+P+IPVLF LLAFVWQA+VSFR Sbjct: 2 SLLLAKLPEAYAPFDPIVDVLPIIPVLFLLLAFVWQASVSFR 43
BLAST of CK937408 vs. ExPASy Swiss-Prot
Match: PSBK_CHAVU (Photosystem II reaction center protein K OS=Chara vulgaris GN=psbK PE=3 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.532e-11 Identity = 32/44 (72.73%), Postives = 37/44 (84.09%), Query Frame = 2 Query: 128 SSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 259 S++ AKLPEAYA +P+VDVMPVIPV F LLAFVWQA+VSFR Sbjct: 16 SNNIFLAKLPEAYAIFDPLVDVMPVIPVFFLLLAFVWQASVSFR 59
BLAST of CK937408 vs. ExPASy Swiss-Prot
Match: PSBK_TRIEI (Photosystem II reaction center protein K OS=Trichodesmium erythraeum (strain IMS101) GN=psbK PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.457e-11 Identity = 31/42 (73.81%), Postives = 35/42 (83.33%), Query Frame = 2 Query: 134 SFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 259 + L AKLPEAY+ NP+VDV+PVIPV F LLAFVWQAAV FR Sbjct: 4 AMLLAKLPEAYSVFNPLVDVLPVIPVFFLLLAFVWQAAVGFR 45
BLAST of CK937408 vs. ExPASy Swiss-Prot
Match: PSBK_PSEAK (Photosystem II reaction center protein K OS=Pseudendoclonium akinetum GN=psbK PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.457e-11 Identity = 32/43 (74.42%), Postives = 38/43 (88.37%), Query Frame = 2 Query: 131 SSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 259 ++ L AKLPEAYA +PIVDV+PVIP+LF LLAFVWQA+VSFR Sbjct: 2 TTLLLAKLPEAYAPFDPIVDVLPVIPLLFLLLAFVWQASVSFR 44
BLAST of CK937408 vs. ExPASy Swiss-Prot
Match: PSBK_HUPLU (Photosystem II reaction center protein K OS=Huperzia lucidula GN=psbK PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.457e-11 Identity = 31/39 (79.49%), Postives = 36/39 (92.31%), Query Frame = 2 Query: 143 FAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 259 FAKLPEAYA +PIV+VMP+IP+ FFLLAFVWQA+VSFR Sbjct: 15 FAKLPEAYAVSDPIVNVMPIIPLFFFLLAFVWQASVSFR 53
BLAST of CK937408 vs. ExPASy Swiss-Prot
Match: PSBK_PORYE (Photosystem II reaction center protein K OS=Porphyra yezoensis GN=psbK PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.820e-11 Identity = 32/50 (64.00%), Postives = 38/50 (76.00%), Query Frame = 2 Query: 110 LNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 259 +NSAL+ AKLPEAYA PI+D++PVIPV F LLAFVWQAA+ FR Sbjct: 1 MNSALF-----LAKLPEAYAIFKPIIDILPVIPVFFLLLAFVWQAAIGFR 45
BLAST of CK937408 vs. ExPASy Swiss-Prot
Match: PSBK_PORPU (Photosystem II reaction center protein K OS=Porphyra purpurea GN=psbK PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.820e-11 Identity = 33/50 (66.00%), Postives = 38/50 (76.00%), Query Frame = 2 Query: 110 LNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 259 +NSAL+ AKLPEAYA PIVD++PVIPV F LLAFVWQAA+ FR Sbjct: 1 MNSALF-----LAKLPEAYAVFKPIVDILPVIPVFFLLLAFVWQAAIGFR 45
BLAST of CK937408 vs. ExPASy Swiss-Prot
Match: PSBK_OSTTA (Photosystem II reaction center protein K OS=Ostreococcus tauri GN=psbK PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.820e-11 Identity = 31/41 (75.61%), Postives = 36/41 (87.80%), Query Frame = 2 Query: 137 FLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 259 FL +LPEAYA +PIVDV+P+IPVLF LLAFVWQA+VSFR Sbjct: 5 FLIGRLPEAYAPFDPIVDVLPIIPVLFLLLAFVWQASVSFR 45
BLAST of CK937408 vs. ExPASy Swiss-Prot
Match: PSBK_MESVI (Photosystem II reaction center protein K OS=Mesostigma viride GN=psbK PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.602e-11 Identity = 30/40 (75.00%), Postives = 36/40 (90.00%), Query Frame = 2 Query: 140 LFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 259 + AKLPEAYA +P+VDV+PVIP+LF LLAFVWQA+VSFR Sbjct: 8 ILAKLPEAYAMFDPLVDVLPVIPLLFLLLAFVWQASVSFR 47 The following BLAST results are available for this feature:
BLAST of CK937408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937408 ID=CK937408; Name=CK937408; organism=Citrus sinensis; type=EST; length=666bpback to top |