CX675308
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX675308 vs. ExPASy Swiss-Prot
Match: KCAB3_RAT (Voltage-gated potassium channel subunit beta-3 OS=Rattus norvegicus GN=Kcnab3 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.395e-12 Identity = 54/188 (28.72%), Postives = 92/188 (48.94%), Query Frame = 2 Query: 5 SPVSEEDGISIIKHAFNKGITFFDTADKYGPYTNEILLGKALKMLP--RENIQVATKFGFAELGLDAVIVKG-NPEYVRSCCEASLKRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PITAVQLEWSLWTRD-IENEIVPLCRELGIGIVPYSPL 538 S +S+E ++ A+ G+ FDTA+ Y E LG LK R + + TK + G A +G + +++ + SL RL +EY+D+ + +R D S P+EE + M ++ +G Y G S S I A+++ P Q E + R+ +E ++ L ++G+G V +SPL Sbjct: 103 SQISDETAEDLLTVAYEHGVNLFDTAEVYAAGKAERTLGNILKSKGWRRSSYVITTKIFW---GGQAETERGLSRKHIIEGLQGSLDRLQLEYVDIVFANRSDPSSPMEEIVRAMTYVINQGLALYWGTSRWSAAEIMEAYSMARQFNLIPPVCEQAENHFFQREKVEMQLPELYHKIGVGSVTWSPL 287
BLAST of CX675308 vs. ExPASy Swiss-Prot
Match: KCAB3_HUMAN (Voltage-gated potassium channel subunit beta-3 OS=Homo sapiens GN=KCNAB3 PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 3.670e-11 Identity = 53/196 (27.04%), Postives = 92/196 (46.94%), Query Frame = 2 Query: 5 SPVSEEDGISIIKHAFNKGITFFDTADKYGPYTNEILLGKALKMLP--RENIQVATKFGFAELGLDAVIVKG-NPEYVRSCCEASLKRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PITAVQLEWSLWTRD-IENEIVPLCRELGIGIVPYSPLGRGFFGGK 562 S +S+E ++ A+ G+ FDTA+ Y E LG LK R + + TK + G A +G + +++ SL+RL + Y+D+ + +R D + P+EE + M ++ +G Y G S I A+++ P Q E L+ R+ +E ++ L ++G+G V + PL G K Sbjct: 103 SQISDETAEDVLTVAYEHGVNLFDTAEVYAAGKAERTLGNILKSKGWRRSSYVITTKIFW---GGQAETERGLSRKHIIEGLRGSLERLQLGYVDIVFANRSDPNCPMEEIVRAMTYVINQGLALYWGTSRWGAAEIMEAYSMARQFNLIPPVCEQAEHHLFQREKVEMQLPELYHKIGVGSVTWYPLACGLITSK 295
BLAST of CX675308 vs. ExPASy Swiss-Prot
Match: Y1669_ARATH (Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana GN=At1g06690 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.177e-11 Identity = 58/195 (29.74%), Postives = 93/195 (47.69%), Query Frame = 2 Query: 47 AFNKGITFFDTADKYGP------YTNEILLGKALK----MLPRENIQVATKFGFAELGLDAVIVKGNPEYVRSCCEASLKRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH-----PITAVQLEWSLWTRDIENE-IVPLCRELGIGIVPYSPLGRGFFGGKAVVESVP 583 + + GI FFDTA+ YG ++E LLG+ ++ P + VATKF A+ + E V + + SL RL++ +DLY H E + + VE+G +K +G+S S +R A+ P+ + Q+ +SL R E + C ELG+ ++ YSP+ +G GK E+ P Sbjct: 94 SLDNGIDFFDTAEVYGSKFSLGAISSETLLGRFIRERKERYPGAEVSVATKFA-------ALPWRFGRESVVTALKDSLSRLELSSVDLYQLHWPGLWGN-EGYLDGLGDAVEQGLVKAVGVSNYSEKRLRDAYERLKKRGIPLASNQVNYSLIYRAPEQTGVKAACDELGVTLIAYSPIAQGALTGKYTPENPP 280
BLAST of CX675308 vs. ExPASy Swiss-Prot
Match: ARK73_RAT (Aflatoxin B1 aldehyde reductase member 3 OS=Rattus norvegicus GN=Akr7a3 PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 8.177e-11 Identity = 57/186 (30.65%), Postives = 83/186 (44.62%), Query Frame = 2 Query: 38 IKHAFNKGITFFDTADKYGPYTNEILLGKALKMLPREN--IQVATKFGFAELGLDAVIVKGN---PEYVRSCCEASLKRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE------ASPDTIRRAHAVHPITAVQLEWSLWTRDIENEIVPLCRELGIGIVPYSPLGRGFFGGK 562 ++ +G T DTA Y +E +LG L R +++ATK A + G P VR E SLKRL +DL+Y H D PIEET+ +L +EGK +GLS A T+ + + T Q ++ TR +E E+ P R G+ ++PL G G+ Sbjct: 28 VRAFLQRGHTEIDTAFVYANGQSETILGDLGLGLGRSGCKVKIATK---------AAPMFGKTLKPADVRFQLETSLKRLQCPRVDLFYLHFPDHGTPIEETLQACHQLHQEGKFVELGLSNYVSWEVAEICTLCKKNGWIMPTVYQGMYNAITRQVETELFPCLRHFGLRFYAFNPLAGGLLTGR 204 The following BLAST results are available for this feature:
BLAST of CX675308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675308 ID=CX675308; Name=CX675308; organism=Citrus sinensis; type=EST; length=807bpback to top |