EY665876
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665876 vs. ExPASy Swiss-Prot
Match: RCA_PHAVU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1 PE=2 SV=1) HSP 1 Score: 382.489 bits (981), Expect = 1.737e-105 Identity = 190/230 (82.61%), Postives = 203/230 (88.26%), Query Frame = 2 Query: 11 LVFAKMPINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDHIVKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVESIGKSLVNSKEQTPTLSKQGMTMENLLQYRKLDGPEPKN 700 LVFAKM INPIMMSAGELESGNAGEPAKLIRQRYREA+D+IKKGKMC L INDLDAGAGR+GGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKE+N RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR D V + IV+LVD PGQSIDFFGALRARVYDDEVRKWISGVGV+S+GK LVNSKE PT + MT++ LL Y + E +N Sbjct: 181 LVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREASDLIKKGKMCVLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVPEKDIVELVDKHPGQSIDFFGALRARVYDDEVRKWISGVGVDSVGKKLVNSKEGPPTFDQPKMTLDKLLLYASMLVQEQEN 410
BLAST of EY665876 vs. ExPASy Swiss-Prot
Match: RCA2_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Nicotiana tabacum GN=RCA PE=2 SV=1) HSP 1 Score: 381.719 bits (979), Expect = 2.964e-105 Identity = 185/230 (80.43%), Postives = 204/230 (88.70%), Query Frame = 2 Query: 11 LVFAKMPINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDHIVKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVESIGKSLVNSKEQTPTLSKQGMTMENLLQYRKLDGPEPKN 700 LVF KM INPIMMSAGELESGNAGEPAKLIRQRYREAA+II+KG +CCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNK+EN RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DNV ++ ++K+VDTFPGQSIDFFGALRARVYDDEVRKW+SG G+E+IG L+NS + PT + MT+E LL+Y + E +N Sbjct: 181 LVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEIIRKGNICCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFGALRARVYDDEVRKWVSGTGIEAIGDKLLNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQEN 410
BLAST of EY665876 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2) HSP 1 Score: 377.867 bits (969), Expect = 4.279e-104 Identity = 190/244 (77.87%), Postives = 203/244 (83.20%), Query Frame = 2 Query: 11 LVFAKMPINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDHIVKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVESIGKSLVNSKEQTPTLSKQGMTMENLLQYRKLDGPEPKNGQTSSLGSNNYSGA 742 LV AKM INPIMMSAGELESGNAGEPAKLIRQRYREAAD+IKKGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEEN RVPII TGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR D + D+ IV LVD FPGQSIDFFGALRARVYDDEVRK++ +GVE IGK LVNS+E P + MT E L++Y + E +N + L S A Sbjct: 177 LVMAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIICTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQA 420
BLAST of EY665876 vs. ExPASy Swiss-Prot
Match: RCA1_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 377.867 bits (969), Expect = 4.279e-104 Identity = 185/230 (80.43%), Postives = 200/230 (86.96%), Query Frame = 2 Query: 11 LVFAKMPINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDHIVKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVESIGKSLVNSKEQTPTLSKQGMTMENLLQYRKLDGPEPKN 700 LVF KM INPIMMSAGELESGNAGEPAKLIRQRYREAA+II+KG MCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNK+EN RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVC GIFR DNV + +VK+VD FPGQSIDFFGALRARVYDDEVRKW+SG G+E IG L+NS + PT + MT+E LL+Y + E +N Sbjct: 181 LVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEIIRKGNMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFGALRARVYDDEVRKWVSGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQEN 410
BLAST of EY665876 vs. ExPASy Swiss-Prot
Match: RCA_SPIOL (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 372.089 bits (954), Expect = 2.348e-102 Identity = 182/244 (74.59%), Postives = 204/244 (83.61%), Query Frame = 2 Query: 11 LVFAKMPINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDHIVKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVESIGKSLVNSKEQTPTLSKQGMTMENLLQYRKLDGPEPKNGQTSSLGSNNYSGA 742 LVFAK+ INPIMMSAGELESGNAGEPAKLIRQRYREAAD+I KGKMC L INDL+ GAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNK++N RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVC GIF+ D V +H+VKLVD FPGQSIDFFGALRARVY DEVRKW++ VGV+++GK LVNSK+ P + MT++ L++Y + E +N + L S A Sbjct: 175 LVFAKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLEPGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYHDEVRKWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSA 418
BLAST of EY665876 vs. ExPASy Swiss-Prot
Match: RCA_CHLRE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 333.954 bits (855), Expect = 7.087e-91 Identity = 169/244 (69.26%), Postives = 193/244 (79.10%), Query Frame = 2 Query: 11 LVFAKMPINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDHIVKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVESIGKSLVNSKEQTPTLSKQGMTMENLLQYRKLDGPEPKNGQTSSLGSNNYSGA 742 L + K+ I PI+MSAGELESGNAGEPAKLIR RYREA+DIIKKG+MC L INDLDAGAGRMG TTQYTVNNQMVNATLMNIADNPT VQLPG+Y EE PRVPI+ TGNDFSTLYAPLIRDGRMEK+YW PTREDRIGVC GIF+ DNV + LVDTFPGQSIDFFGALRARVYDD VR+WI+ GV+ IG+ LVN++++ + K M + L++Y K E +N + L SGA Sbjct: 150 LAYKKLGIAPIVMSAGELESGNAGEPAKLIRTRYREASDIIKKGRMCSLFINDLDAGAGRMGDTTQYTVNNQMVNATLMNIADNPTNVQLPGVYKNEEIPRVPIVCTGNDFSTLYAPLIRDGRMEKYYWNPTREDRIGVCMGIFQEDNVQRREVENLVDTFPGQSIDFFGALRARVYDDMVRQWITDTGVDKIGQQLVNARQKV-AMPKVSMDLNVLIKYGKSLVDEQENVKRVQLADAYLSGA 392
BLAST of EY665876 vs. ExPASy Swiss-Prot
Match: RCA_ANASC (Ribulose bisphosphate carboxylase/oxygenase activase OS=Anabaena sp. (strain CA / ATCC 33047) GN=rca PE=3 SV=1) HSP 1 Score: 274.248 bits (700), Expect = 6.664e-73 Identity = 146/267 (54.68%), Postives = 182/267 (68.16%), Query Frame = 2 Query: 11 LVFAKMPINPIMMSAGELESGNAGEPAKLIRQRYREAADIIK-KGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDHIVKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVESIGKSLVNSKEQTPTLSKQGMTMENLLQYRKLDGPEPKNGQTSSL--------GSNNYSGAGPPFAEPPCSKHSP 784 L F KM + ++S GELES +AG+PA+LIR RYRE A++IK +GKMC LMINDLDAGAGR TQYTVN Q+VNATLMNIADNPT VQLPG Y+ RVPIIVTGNDFSTLYAPLIRDGRMEKFYW P R++++G+ GIF D ++ + KLVD+FP QSIDFF ALR+R+YD+++R +I VG E++ +VNS E P K T+ +L++ E K +TS L +Y A P AE S+ SP Sbjct: 49 LAFEKMGVEVTLISGGELESPDAGDPARLIRLRYRETAELIKVRGKMCVLMINDLDAGAGRFDEGTQYTVNTQLVNATLMNIADNPTDVQLPGSYDSTPLRRVPIIVTGNDFSTLYAPLIRDGRMEKFYWEPHRDEKVGIVGGIFAEDGLSQRDVEKLVDSFPNQSIDFFSALRSRIYDEQIRDFIHQVGYENVSLRVVNSLEGPPAFKKPDFTLSHLIESANFMVAEQKRIETSQLVDEYNRLNRGRSYQPAS-PVAEIATSQPSP 314
BLAST of EY665876 vs. ExPASy Swiss-Prot
Match: RCA_ANASP (Ribulose bisphosphate carboxylase/oxygenase activase OS=Anabaena sp. (strain PCC 7120) GN=rca PE=3 SV=1) HSP 1 Score: 270.781 bits (691), Expect = 7.368e-72 Identity = 150/279 (53.76%), Postives = 184/279 (65.95%), Query Frame = 2 Query: 11 LVFAKMPINPIMMSAGELESGNAGEPAKLIRQRYREAADIIK-KGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDHIVKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVESIGKSLVNSKEQTPTLSKQGMTMENLLQYRKLDGPEPKNGQTSSLGSNNYS----GAGPPFAEPPCSKHSPPPAHFQCVTSSYNPHL 832 L F KM I ++S GELES +AG+PA+LIR RYRE A++IK +GKMC LMINDLDAGAGR TQYTVN Q+VNATLMNIADNPT VQLPG Y+ RVPIIVTGNDFSTLYAPLIRDGRMEKFYW P R+D++G+ GIF D ++ I +LVDTFP QSIDFF ALR+R+YD ++R +I VG E I +VNS E P K ++ +L++ L E + S L + Y+ G G A PP + P + + N HL Sbjct: 49 LAFEKMGIEVTLISGGELESPDAGDPARLIRLRYRETAELIKVRGKMCVLMINDLDAGAGRFDEGTQYTVNTQLVNATLMNIADNPTDVQLPGSYDSNPIRRVPIIVTGNDFSTLYAPLIRDGRMEKFYWEPNRDDKVGIVGGIFAEDGLSQREIEQLVDTFPKQSIDFFSALRSRIYDIQIRDFIHKVGFERISLRVVNSLEAPPEFKKPDFSLAHLIESGNLVLGEQQRVDNSQL-VDEYNRLNRGRGYQTAPPPEAPVIQPVNNSSHKQKTSNTHL 326
BLAST of EY665876 vs. ExPASy Swiss-Prot
Match: RCA_ARAHY (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic (Fragments) OS=Arachis hypogaea GN=RCA PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.322e-25 Identity = 81/169 (47.93%), Postives = 81/169 (47.93%), Query Frame = 2 Query: 23 KMPINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDHIVKLVDTFPGQSIDFFGALR 529 KM INPIMMSAGELESGNAGEPAK MCCL INDLDAGAGR VPIIVTGNDFSTLYAPLI RIGVC GIFR LVDTFPGQSIDFFGALR Sbjct: 57 KMGINPIMMSAGELESGNAGEPAK-----------------MCCLFINDLDAGAGR-----------------------------------------VPIIVTGNDFSTLYAPLI----------------RIGVCTGIFR-----------LVDTFPGQSIDFFGALR 140
BLAST of EY665876 vs. ExPASy Swiss-Prot
Match: RCA_VITSX (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic (Fragments) OS=Vitis sp. PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.493e-11 Identity = 38/61 (62.30%), Postives = 40/61 (65.57%), Query Frame = 2 Query: 23 KMPINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLMINDLDAGAGRMGGTT 205 +M INPIMMSAGELESGNAGEPA KMCCL INDLDAGAGR+G T Sbjct: 15 RMGINPIMMSAGELESGNAGEPA-----------------KMCCLFINDLDAGAGRIGVCT 58 The following BLAST results are available for this feature:
BLAST of EY665876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665876 ID=EY665876; Name=EY665876; organism=Citrus sinensis; type=EST; length=885bpback to top |