CK937341

Overview
NameCK937341
Unique NameCK937341
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length757
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937341 vs. ExPASy Swiss-Prot
Match: PCAF_ACIAD (Beta-ketoadipyl-CoA thiolase OS=Acinetobacter sp. (strain ADP1) GN=pcaF PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.920e-15
Identity = 61/165 (36.97%), Postives = 85/165 (51.52%), Query Frame = 3
Query:  261 GGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQV------NPKVEIFTQARDCLLP----------MGITSENVAQRFGVTRQEQD 704
            GG     ADDL A  + A+IE+   +N ++V D++ G     G       RM+A  AG P  VP  TVNR C S L A+A  A AIKAG   + IA G+ESM+  +  V+G+         K+E  T     + P          M  T+ENVA++FG+ R++QD
Sbjct:   19 GGLAAVRADDLGAIPIAALIERNPSVNWAQVDDVIYGCANQAGEDNRNVGRMSALLAGLPVEVPATTVNRLCGSSLDAIAMAARAIKAGEAHLIIAGGVESMS-RAPYVMGKSEGAFGRTQKIEDTTMGWRFINPKLKAMYGVDTMPQTAENVAEQFGIQREDQD 182          
BLAST of CK937341 vs. ExPASy Swiss-Prot
Match: FADA_PSEPF (3-ketoacyl-CoA thiolase OS=Pseudomonas fluorescens (strain Pf0-1) GN=fadA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.920e-15
Identity = 53/166 (31.93%), Postives = 90/166 (54.22%), Query Frame = 3
Query:  210 DVVIVAAYRTANCKAKRGGFKDTLADDLLAPVLKAVIEK-TRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQD 704
            DVVIV   RT   ++K G  ++T A+D+ A ++  ++E+ T+++P+EV D++ G V           RMA+     P T   +TV+R C S + A+   A AI  G  D+ +  G+E M    +S++  V+P   +   A      MG+T+E + +  G+TR++QD
Sbjct:    7 DVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNTKVDPAEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAGQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM--GHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGITREQQD 170          
BLAST of CK937341 vs. ExPASy Swiss-Prot
Match: FADA_AERS4 (3-ketoacyl-CoA thiolase OS=Aeromonas salmonicida (strain A449) GN=fadA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.920e-15
Identity = 57/166 (34.34%), Postives = 88/166 (53.01%), Query Frame = 3
Query:  210 DVVIVAAYRTANCKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQD 704
            DVVIV   RT   ++K G F++  A+DL A ++ +++ +   L+P+E+ DI  G V           R AA  AG P+ V   TVNR C S +QA+ D + AI+ G  DI I  G+E M    +S     +P +         +  MG+T+E + +  G++RQ+QD
Sbjct:    3 DVVIVDCIRTPMGRSKGGAFRNVRAEDLSAHLMSSILLRNPNLDPNEIEDIYWGCVQQTLEQGFNIARNAALLAGIPKQVGAVTVNRLCGSSMQALHDASRAIQVGDGDIFIIGGVEHMGHVPMSHGVDFHPGMAKSVAKASGM--MGLTAEMLGKLHGISRQQQD 166          
BLAST of CK937341 vs. ExPASy Swiss-Prot
Match: CATF_ACIAD (Beta-ketoadipyl-CoA thiolase OS=Acinetobacter sp. (strain ADP1) GN=catF PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.920e-15
Identity = 61/165 (36.97%), Postives = 85/165 (51.52%), Query Frame = 3
Query:  261 GGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQV------NPKVEIFTQARDCLLP----------MGITSENVAQRFGVTRQEQD 704
            GG     ADDL A  + A+IE+   +N ++V D++ G     G       RM+A  AG P  VP  TVNR C S L A+A  A AIKAG   + IA G+ESM+  +  V+G+         K+E  T     + P          M  T+ENVA++FG+ R++QD
Sbjct:   19 GGLAAVRADDLGAIPIAALIERNPSVNWAQVDDVIYGCANQAGEDNRNVGRMSALLAGLPVEVPATTVNRLCGSSLDAIAMAARAIKAGEAHLIIAGGVESMS-RAPYVMGKSEGAFGRTQKIEDTTMGWRFINPKLKAMYGVDTMPQTAENVAEQFGIQREDQD 182          
BLAST of CK937341 vs. ExPASy Swiss-Prot
Match: FADA_PSYCK (3-ketoacyl-CoA thiolase OS=Psychrobacter cryohalolentis (strain K5) GN=fadA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.426e-15
Identity = 53/165 (32.12%), Postives = 82/165 (49.70%), Query Frame = 3
Query:  210 DVVIVAAYRTANCKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQD 704
            DVVIV   R+A  K K G F+   AD + A +++A++E+   +P +V DI+ G V           R     AG P+T   +T+NR C S +QA+   A  I  G  D+ I  G+E M    + ++  V+   E           MG+T+E + +   +TR+EQD
Sbjct:    8 DVVIVDGVRSAMGKTKNGMFRHVRADSMSAELVRALVERNDFDPRDVEDIIWGCVNQTLEQGLNIGRNIGLLAGIPKTAGGQTINRLCGSSMQALHTAAAQIMTGQGDVFIIGGVEHM--GHVGMMHGVDLNPEASKHYAKASNMMGLTAEMLGRMNNITREEQD 170          
BLAST of CK937341 vs. ExPASy Swiss-Prot
Match: FADA_PSYA2 (3-ketoacyl-CoA thiolase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=fadA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.426e-15
Identity = 53/165 (32.12%), Postives = 82/165 (49.70%), Query Frame = 3
Query:  210 DVVIVAAYRTANCKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQD 704
            DVVIV   R+A  K K G F+   AD + A +++A++E+   +P +V DI+ G V           R     AG P+T   +TVNR C S +QA+   A  I  G  D+ I  G+E M    + ++  ++   E           MG+T+E + +   +TR+EQD
Sbjct:    8 DVVIVDGVRSAMGKTKNGMFRHVRADSMSAELVRALVERNDFDPRDVEDIIWGCVNQTLEQGLNIGRNIGLLAGIPKTAGGQTVNRLCGSSMQALHTAAAQIMTGQGDVFIIGGVEHM--GHVGMMHGIDLNPEASKHYAKASNMMGLTAEMLGRMNNITREEQD 170          
BLAST of CK937341 vs. ExPASy Swiss-Prot
Match: FADA_PSEFR (3-ketoacyl-CoA thiolase OS=Pseudomonas fragi GN=fadA PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.096e-14
Identity = 52/166 (31.33%), Postives = 89/166 (53.61%), Query Frame = 3
Query:  210 DVVIVAAYRTANCKAKRGGFKDTLADDLLAPVLKAVIEK-TRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQD 704
            DVVIV   RT   ++K G  ++T A+D+ A ++  V+E+ ++++P EV D++ G V           RMA+     P T   +TV+R C S + A+   A AI  G  D+ +  G+E M    +S++  V+P   +   A      MG+T+E + +  G++R++QD
Sbjct:    7 DVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM--GHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGISREQQD 170          
BLAST of CK937341 vs. ExPASy Swiss-Prot
Match: FADA_MARAV (3-ketoacyl-CoA thiolase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=fadA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.432e-14
Identity = 51/166 (30.72%), Postives = 85/166 (51.20%), Query Frame = 3
Query:  210 DVVIVAAYRTANCKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQD 704
            DVV+V   RT   +AK G F++  A+ L A +++A+ E+  +L+P EV D++ G V           R  +     P     +TVNR C S + A+   A AI+ G  D+ +  G+E M    ++     NP    ++     +  MG+T+E +A+  G+TR++QD
Sbjct:    7 DVVVVDCVRTPMGRAKNGCFRNVRAETLSAALIEALFERNPKLDPKEVEDVIWGCVNQTKEQGFNVARQISLLTRIPHESAAQTVNRLCGSAMSAIHTAAQAIQTGNGDVFLVGGVEHMGHVPMTEGFDHNPAASKYSAKASNM--MGLTAEMLAKMHGITREQQD 170          
BLAST of CK937341 vs. ExPASy Swiss-Prot
Match: FADA_ALISL (3-ketoacyl-CoA thiolase OS=Aliivibrio salmonicida (strain LFI1238) GN=fadA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.432e-14
Identity = 53/166 (31.93%), Postives = 88/166 (53.01%), Query Frame = 3
Query:  210 DVVIVAAYRTANCKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQD 704
            +VVIV   RT   ++K G F+ T A+DL A ++K ++E+   ++P+++ DI  G V           R A+  AG P+++   TVNR C S +QA+ D + AI  G  DI I  G+E M    + +   V+    +          MG+T+E + +  G++R++QD
Sbjct:    3 NVVIVDCIRTPMGRSKNGVFRHTRAEDLSAHLMKGLLERNPNVDPNQIEDIYWGCVQQTLEQGFNIARNASLLAGLPKSIAATTVNRLCGSSMQALHDASRAIMVGDADICIIGGVEHM--GHVPMNHGVDFHSGLSKNVAKASGMMGLTAEMLGKMHGISREQQD 166          
BLAST of CK937341 vs. ExPASy Swiss-Prot
Match: FADA_PSEF5 (3-ketoacyl-CoA thiolase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=fadA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.870e-14
Identity = 52/166 (31.33%), Postives = 89/166 (53.61%), Query Frame = 3
Query:  210 DVVIVAAYRTANCKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQD 704
            DVVIV   RT   ++K G  ++T A+D+ A ++  ++E+  +++P+EV D++ G V           RMA+     P T   +TV+R C S + A+   A AI  G  D+ +  G+E M    +S++  V+P   +   A      MG+T+E + +  G+TR++QD
Sbjct:    7 DVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNAKVDPAEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAGQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM--GHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGITREQQD 170          
The following BLAST results are available for this feature:
BLAST of CK937341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
PCAF_ACIAD4.920e-1536.97Beta-ketoadipyl-CoA thiolase OS=Acinetobacter sp. ... [more]
FADA_PSEPF4.920e-1531.933-ketoacyl-CoA thiolase OS=Pseudomonas fluorescens... [more]
FADA_AERS44.920e-1534.343-ketoacyl-CoA thiolase OS=Aeromonas salmonicida (... [more]
CATF_ACIAD4.920e-1536.97Beta-ketoadipyl-CoA thiolase OS=Acinetobacter sp. ... [more]
FADA_PSYCK6.426e-1532.123-ketoacyl-CoA thiolase OS=Psychrobacter cryohalol... [more]
FADA_PSYA26.426e-1532.123-ketoacyl-CoA thiolase OS=Psychrobacter arcticus ... [more]
FADA_PSEFR1.096e-1431.333-ketoacyl-CoA thiolase OS=Pseudomonas fragi GN=fa... [more]
FADA_MARAV1.432e-1430.723-ketoacyl-CoA thiolase OS=Marinobacter aquaeolei ... [more]
FADA_ALISL1.432e-1431.933-ketoacyl-CoA thiolase OS=Aliivibrio salmonicida ... [more]
FADA_PSEF51.870e-1431.333-ketoacyl-CoA thiolase OS=Pseudomonas fluorescens... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004511_B03 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IIF_B03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937341 ID=CK937341; Name=CK937341; organism=Citrus sinensis; type=EST; length=757bp
CGGCCGGGGGTTCTCGNNNCCTTTGAACTCTAAAGCTCTCNNNTGAAACC
TGAGAGTGAGAGAGGGGGAAAGCTCTTCACAGACAGAGAATTCTGCTTCA
ACATCTTCGACCTTCTTCTTCCCAAACCAGTGACTCGCCGGCTATTTCTG
CGTCGATTTGTTCGGCTGGTGAGGCTGCAGGGTACCATAGGAAGCCTGCT
TTTGATGATGATGTCGTAATTGTGGCTGCATACCGAACTGCAAATTGCAA
GGCGAAACGTGGAGGCTTCAAGGATACTCTTGCCGATGATCTGCTTGCAC
CTGTTCTGAAGGCAGTGATAGAGAAAACGAGGTTGAATCCCAGCGAAGTA
GGGGATATAGTTGTTGGTACAGTCTTGGCACCTGGCTCAACAAGAGCCAT
GGAGTGTAGGATGGCAGCGTTCTATGCTGGTTTCCCTGAAACGGTGCCCC
TCAGAACTGTCAACAGGCAGTGTTCATCTGGCTTGCAGGCGGTTGCTGAT
GTTGCAACTGCTATAAAAGCTGGATTGTATGACATTGGTATTGCTGCTGG
ATTGGAAAGCATGACTGTGAATTCTATTAGCGTTGTTGGCCAAGTTAACC
CCAAAGTGGAGATCTTTACTCAAGCTCGGGACTGTCTTCTTCCTATGGGT
ATCACTTCTGAAAATGTTGCACAAAGATTTGGTGTGACACGACAAGAGCA
AGACCTGGCTGCCATTGAATCTCATAGGCGTGCTGCTGCTGCAACTGCAT
CTGGCAA
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