CK937320

Overview
NameCK937320
Unique NameCK937320
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length596
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937320 vs. ExPASy Swiss-Prot
Match: GL19_ARATH (Putative germin-like protein subfamily 1 member 9 OS=Arabidopsis thaliana GN=At5g38910 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 5.585e-54
Identity = 94/160 (58.75%), Postives = 109/160 (68.12%), Query Frame = 2
Query:   56 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRTSEIFLVLEGTLYVGFVTSDQLNNTLIAKALNKGDVFVFPQGLIHFQFNIGKTNAAAYSASKQPIPG 535
            +DP  LQD CV +N P DGVFVNGKFCKDPKL   EDFFF+GL +      + G + T  NV  +PGLNTLGIS  RIDY  YGQ PPH HPR SE+  V  GTL+VGFVTS+   N L +K L +GDVFVFPQGLIHFQ N+GK  A A++      PG
Sbjct:   23 SDPSSLQDFCVGVNTPADGVFVNGKFCKDPKLVTVEDFFFTGLHEARPPNPKTGSNVTAVNVNNLPGLNTLGISLVRIDYGVYGQNPPHTHPRASEVLYVAVGTLFVGFVTSNP-ENRLFSKTLYEGDVFVFPQGLIHFQVNVGKYPAVAFAGLSSQNPG 181          

HSP 2 Score: 40.817 bits (94), Expect = 5.585e-54
Identity = 18/27 (66.67%), Postives = 22/27 (81.48%), Query Frame = 3
Query:  516 LNSQFPGEVTIADTVFGAXPSINPDFL 596
            L+SQ PG +TIADTVFG+ P I+P FL
Sbjct:  175 LSSQNPGVITIADTVFGSNPQIDPSFL 201          
BLAST of CK937320 vs. ExPASy Swiss-Prot
Match: GL111_ARATH (Germin-like protein subfamily 1 member 11 OS=Arabidopsis thaliana GN=At5g38940 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 1.121e-51
Identity = 94/160 (58.75%), Postives = 111/160 (69.38%), Query Frame = 2
Query:   56 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRTSEIFLVLEGTLYVGFVTSDQLNNTLIAKALNKGDVFVFPQGLIHFQFNIGKTNAAAYSASKQPIPG 535
            +DP  LQD CV+ N   +GVFVNGKFCKDPKL  A+DFFFSGL       + +G   T  NV  + GLNTLGIS  RIDYA  GQ PPH HPR +EI +V +GTL VGFVTS+  +N L +K LN+GDVFVFP+GLIHFQ NIGK  A A++A     PG
Sbjct:   25 SDPSQLQDFCVSANTSANGVFVNGKFCKDPKLVTADDFFFSGLQTARPITSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVNGQNPPHTHPRATEILVVEQGTLLVGFVTSNP-DNRLFSKVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNPG 183          

HSP 2 Score: 39.6614 bits (91), Expect = 1.121e-51
Identity = 18/27 (66.67%), Postives = 22/27 (81.48%), Query Frame = 3
Query:  516 LNSQFPGEVTIADTVFGAXPSINPDFL 596
            L+SQ PG +TIA+TVFGA P+INP  L
Sbjct:  177 LSSQNPGVITIANTVFGANPAINPTIL 203          
BLAST of CK937320 vs. ExPASy Swiss-Prot
Match: GL110_ARATH (Germin-like protein subfamily 1 member 10 OS=Arabidopsis thaliana GN=At5g38930 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 2.070e-50
Identity = 93/160 (58.13%), Postives = 108/160 (67.50%), Query Frame = 2
Query:   56 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRTSEIFLVLEGTLYVGFVTSDQLNNTLIAKALNKGDVFVFPQGLIHFQFNIGKTNAAAYSASKQPIPG 535
            +DP  LQD CV+ N   +GVFVNGKFCKDPKL  A+DFFF GL       + +G   T  NV  + GLNTLGIS  RIDYA  GQ PPH HPR +EI +V  GTL VGFVTS+  +N L  K LN+GDVFVFP+GLIHFQ NIGK  A A++A     PG
Sbjct:   25 SDPSQLQDFCVSANSSANGVFVNGKFCKDPKLVTADDFFFPGLQTARPITSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVDGQNPPHTHPRATEILVVELGTLLVGFVTSNP-DNRLFTKVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNPG 183          

HSP 2 Score: 39.6614 bits (91), Expect = 2.070e-50
Identity = 18/27 (66.67%), Postives = 22/27 (81.48%), Query Frame = 3
Query:  516 LNSQFPGEVTIADTVFGAXPSINPDFL 596
            L+SQ PG +TIA TVFGA P+INP+ L
Sbjct:  177 LSSQNPGVITIAPTVFGANPAINPNIL 203          
BLAST of CK937320 vs. ExPASy Swiss-Prot
Match: GLP1_MESCR (Germin-like protein OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 7.785e-50
Identity = 94/162 (58.02%), Postives = 106/162 (65.43%), Query Frame = 2
Query:   56 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRTSEIFLVLEGTLYVGFVTSDQLN--NTLIAKALNKGDVFVFPQGLIHFQFNIGKTNAAAYSASKQPIPG 535
            TDP  LQD CV +N P DG+FVNG FCKDP     +DF F GL  P NT N LG   T      +PGLNTLGIS  R+D+AP+G  PPH HPR +E+F+VLEGT YVGFVTS+  +  N L AK LNKGDVFVFPQGLIHFQ NIG       S      PG
Sbjct:   23 TDPTQLQDFCVGVNKPNDGLFVNGLFCKDPMEVNPDDFLFRGLNMPANTDNALGFAATLVTAANLPGLNTLGISVARLDFAPHGLNPPHTHPRATEVFVVLEGTFYVGFVTSNLADGGNKLFAKVLNKGDVFVFPQGLIHFQLNIGNYPGVGISGLSSQNPG 184          

HSP 2 Score: 25.7942 bits (55), Expect = 7.785e-50
Identity = 11/17 (64.71%), Postives = 14/17 (82.35%), Query Frame = 3
Query:  516 LNSQFPGEVTIADTVFG 566
            L+SQ PG +TIA+ VFG
Sbjct:  178 LSSQNPGVITIANAVFG 194          
BLAST of CK937320 vs. ExPASy Swiss-Prot
Match: GL22_ORYSJ (Putative germin-like protein 2-2 OS=Oryza sativa subsp. japonica GN=Os02g0491700 PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 5.406e-48
Identity = 96/160 (60.00%), Postives = 106/160 (66.25%), Query Frame = 2
Query:   56 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRTSEIFLVLEGTLYVGFVTSDQLNNTLIAKALNKGDVFVFPQGLIHFQFNIGKTNAAAYSASKQPIPG 535
            +DPG LQD CV   D    V VNG  CKD K   A DFFFSGL   GNT N+ G + T  NV QIPGLNT+G+S  RIDYAP G  PPH HPR +EI  VLEG+LYVGFV S+   N L  K LNKGDVFVFPQGL+HFQFN G  NA A +A     PG
Sbjct:   29 SDPGLLQDFCVV--DKMSQVRVNGFPCKDAKDVVAGDFFFSGLHMAGNTTNKQGSNVTTVNVAQIPGLNTMGVSLVRIDYAPNGLNPPHTHPRATEIPTVLEGSLYVGFVISNP-ENKLFTKVLNKGDVFVFPQGLVHFQFNNGTNNAVALAALSSQNPG 185          

HSP 2 Score: 33.4982 bits (75), Expect = 5.406e-48
Identity = 14/27 (51.85%), Postives = 20/27 (74.07%), Query Frame = 3
Query:  516 LNSQFPGEVTIADTVFGAXPSINPDFL 596
            L+SQ PG +T+ + VFG+ PSI+ D L
Sbjct:  179 LSSQNPGVITVGNAVFGSKPSISDDIL 205          
BLAST of CK937320 vs. ExPASy Swiss-Prot
Match: GL12_ARATH (Putative germin-like protein subfamily 1 member 2 OS=Arabidopsis thaliana GN=At3g04150 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 8.249e-48
Identity = 96/159 (60.38%), Postives = 111/159 (69.81%), Query Frame = 2
Query:   59 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRTSEIFLVLEGTLYVGFVTSDQLNNTLIAKALNKGDVFVFPQGLIHFQFNIGKTNAAAYSASKQPIPG 535
            DP  LQD CVA N   + VFVNGKFCKDPKL  A DFF+SGL  PGNT+NRLG   TD +V +IPGLNTLGI+  R+D+AP GQ PPHIHPR S+I LVL+G L VGFV+S+  N TL +K L  GDVF FP GL+ F  N GKT+A A        PG
Sbjct:   26 DPNPLQDYCVATNGT-NRVFVNGKFCKDPKLVTANDFFYSGLNIPGNTSNRLGASVTDVDVRRIPGLNTLGIAIARLDFAPGGQLPPHIHPRASQIILVLKGQLSVGFVSSNDYNYTLFSKILYPGDVFAFPIGLVQFHANTGKTHAVAIGVVGSQDPG 183          
BLAST of CK937320 vs. ExPASy Swiss-Prot
Match: GL14_ARATH (Germin-like protein subfamily 1 member 4 OS=Arabidopsis thaliana GN=At3g04180 PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 1.197e-47
Identity = 90/159 (56.60%), Postives = 109/159 (68.55%), Query Frame = 2
Query:   59 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRTSEIFLVLEGTLYVGFVTSDQLNNTLIAKALNKGDVFVFPQGLIHFQFNIGKTNAAAYSASKQPIPG 535
            DP  LQD CVA N+  +GV+VNG+FCKDPK     DF+ SGL  PGNT    G   T  +VE++PGLNTLG+   R D+AP G  PPH HPR S+IFLV++G L+VGFV+S++ N TL  K L  GDVFVFP+GLIHF  NIG+TNA   SA     PG
Sbjct:   26 DPSPLQDYCVATNET-NGVYVNGEFCKDPKRVTTNDFYTSGLNVPGNTIIGPGARNTVVDVERLPGLNTLGVDIARYDFAPGGLDPPHTHPRGSQIFLVMKGKLFVGFVSSNEYNYTLFTKVLYPGDVFVFPKGLIHFHANIGETNAVVISAGGSQDPG 183          

HSP 2 Score: 30.0314 bits (66), Expect = 1.197e-47
Identity = 13/25 (52.00%), Postives = 16/25 (64.00%), Query Frame = 3
Query:  522 SQFPGEVTIADTVFGAXPSINPDFL 596
            SQ PG + I D VFG+ P I+P  L
Sbjct:  179 SQDPGRIIIGDAVFGSKPLIDPKVL 203          
BLAST of CK937320 vs. ExPASy Swiss-Prot
Match: GL112_ARATH (Putative germin-like protein subfamily 1 member 12 OS=Arabidopsis thaliana GN=At5g38960 PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.838e-47
Identity = 95/161 (59.01%), Postives = 113/161 (70.19%), Query Frame = 2
Query:   56 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNT-ANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRTSEIFLVLEGTLYVGFVTSDQLNNTLIAKALNKGDVFVFPQGLIHFQFNIGKTNAAAYSASKQPIPG 535
            +DP  LQD C+ +N P + +FVNGKFCKDPKL  A+DF+FSGL K   T ++ +G + T  NV QIPGLNTLGIS  RIDY   GQ PPH HPR +EI LV EGTL+VGF +S    N L  K LNKGDVFVFP+GLIHFQ NIGK  A A+++     PG
Sbjct:   25 SDPSPLQDFCIGVNTPANALFVNGKFCKDPKLVTADDFYFSGLDKARTTESSPVGSNVTTVNVNQIPGLNTLGISLVRIDYGINGQNPPHTHPRATEILLVQEGTLFVGFFSSFP-ENRLFNKTLNKGDVFVFPEGLIHFQVNIGKQPAVAFASLSSQNPG 184          
BLAST of CK937320 vs. ExPASy Swiss-Prot
Match: GL21_ORYSJ (Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica GN=Os02g0491600 PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 3.135e-47
Identity = 98/160 (61.25%), Postives = 107/160 (66.88%), Query Frame = 2
Query:   56 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRTSEIFLVLEGTLYVGFVTSDQLNNTLIAKALNKGDVFVFPQGLIHFQFNIGKTNAAAYSASKQPIPG 535
            +DP  LQD CVA  D    V VNG  CKDP     EDFFFSGL   GNT+NR G   T  NV QI GLNTLGIS  R+DYAPYG  PPHIHPR +EI  +LEG+LYVGFVTS+   N L  K LNKGDVFVFPQGLIHFQFN G  +  A +A     PG
Sbjct:   22 SDPSQLQDFCVA--DKMSQVLVNGFACKDPAAITVEDFFFSGLHMAGNTSNRQGSAVTGVNVAQISGLNTLGISLARVDYAPYGLNPPHIHPRATEILTILEGSLYVGFVTSNP-ENKLFTKVLNKGDVFVFPQGLIHFQFNYGTKDVIALAALSSQNPG 178          
BLAST of CK937320 vs. ExPASy Swiss-Prot
Match: GL16_ARATH (Germin-like protein subfamily 1 member 6 OS=Arabidopsis thaliana GN=At3g04200 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.874e-46
Identity = 89/159 (55.97%), Postives = 109/159 (68.55%), Query Frame = 2
Query:   59 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRTSEIFLVLEGTLYVGFVTSDQLNNTLIAKALNKGDVFVFPQGLIHFQFNIGKTNAAAYSASKQPIPG 535
            DP  LQD CVA ++  + VFVNGKFCKDPK   A DF +SGL    NT N LG + T  +V +IPGLNTLG+S  R+D+A  GQ PPHIHPR +EI +V +G L VGFV+S+Q NN L  K L +GDVFVFP GLIHFQ N+ +T A A++      PG
Sbjct:   27 DPNPLQDFCVAASET-NRVFVNGKFCKDPKSVTANDFSYSGLNIARNTTNFLGSNVTTVDVNKIPGLNTLGVSLARLDFAQGGQNPPHIHPRATEILVVTKGKLLVGFVSSNQDNNRLFYKVLKRGDVFVFPIGLIHFQMNVRRTRAVAFAGFGSQNPG 184          

HSP 2 Score: 30.4166 bits (67), Expect = 2.874e-46
Identity = 14/25 (56.00%), Postives = 17/25 (68.00%), Query Frame = 3
Query:  522 SQFPGEVTIADTVFGAXPSINPDFL 596
            SQ PG + IAD VFG+ PSI  + L
Sbjct:  180 SQNPGTIRIADAVFGSNPSIPQEVL 204          
The following BLAST results are available for this feature:
BLAST of CK937320 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL19_ARATH5.585e-5458.75Putative germin-like protein subfamily 1 member 9 ... [more]
GL111_ARATH1.121e-5158.75Germin-like protein subfamily 1 member 11 OS=Arabi... [more]
GL110_ARATH2.070e-5058.13Germin-like protein subfamily 1 member 10 OS=Arabi... [more]
GLP1_MESCR7.785e-5058.02Germin-like protein OS=Mesembryanthemum crystallin... [more]
GL22_ORYSJ5.406e-4860.00Putative germin-like protein 2-2 OS=Oryza sativa s... [more]
GL12_ARATH8.249e-4860.38Putative germin-like protein subfamily 1 member 2 ... [more]
GL14_ARATH1.197e-4756.60Germin-like protein subfamily 1 member 4 OS=Arabid... [more]
GL112_ARATH1.838e-4759.01Putative germin-like protein subfamily 1 member 12... [more]
GL21_ORYSJ3.135e-4761.25Putative germin-like protein 2-1 OS=Oryza sativa s... [more]
GL16_ARATH2.874e-4655.97Germin-like protein subfamily 1 member 6 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004511_D04 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IIF_D04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937320 ID=CK937320; Name=CK937320; organism=Citrus sinensis; type=EST; length=596bp
TCAATTTCTTATAGGTATTGCCCTCTTGGCTTTGGCTTCTTCTTTGGCCT
CTGCCACTGACCCTGGCCATCTTCAAGATGTCTGTGTAGCCATCAATGAC
CCCAAGGATGGTGTGTTTGTGAATGGGAAGTTCTGCAAGGACCCCAAGCT
TGCGAGAGCAGAAGATTTCTTCTTCTCAGGGCTAGGCAAGCCTGGAAACA
CAGCAAATCGACTTGGTGTTGATGAAACAGATGCAAATGTTGAGCAAATT
CCAGGACTCAACACCCTTGGCATATCAGCATTCCGTATTGACTATGCACC
ATATGGCCAAAGGCCACCTCACATTCACCCCCGTACCAGCGAAATCTTCT
TAGTCCTGGAAGGAACTCTTTATGTCGGTTTTGTGACATCAGACCAACTG
AATAACACACTCATCGCAAAAGCTCTAAATAAGGGAGATGTTTTTGTGTT
TCCACAAGGTTTGATTCACTTCCAATTCAACATTGGAAAAACAAATGCAG
CTGCCTATTCTGCTTCTAAACAGCCAATTCCCGGGTGAAGTTACCATAGC
CGACACAGTCTTTGGAGCCANTCCTTCAATCAATCCCGATTTTCTT
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