CK937240
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937240 vs. ExPASy Swiss-Prot
Match: ATPA_CUSEX (ATP synthase subunit alpha, plastid OS=Cuscuta exaltata GN=atpA PE=3 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 1.326e-93 Identity = 113/117 (96.58%), Postives = 115/117 (98.29%), Query Frame = 1 Query: 4 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV 354 DLSKQAQAYRQ+SLLLRRPPGREAYPGDVFYLHSRLLERAAKL S LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMK+V Sbjct: 263 DLSKQAQAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSKLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKV 379 HSP 2 Score: 145.206 bits (365), Expect = 1.326e-93 Identity = 79/126 (62.70%), Postives = 88/126 (69.84%), Query Frame = 3 Query: 357 GKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTXXXXXXXXXXXXXXXXRFLLQEQ 734 GKLK SDLDK +QNQLARGQRLRELLKQ+Q+APLTV EQIMTIYTG NGYLDSL++ QVRKFL+EL TYLKTNKP+FQEIISSTK FT RFL++EQ Sbjct: 381 GKLKLELAQFAELEAFAQFASDLDKTSQNQLARGQRLRELLKQSQSAPLTVAEQIMTIYTGINGYLDSLQLRQVRKFLLELCTYLKTNKPRFQEIISSTKTFTEEAEDLLKEAIRDQTDRFLVKEQ 506
BLAST of CK937240 vs. ExPASy Swiss-Prot
Match: ATPA_OENPA (ATP synthase subunit alpha, chloroplastic OS=Oenothera parviflora GN=atpA PE=3 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 1.326e-93 Identity = 114/117 (97.44%), Postives = 114/117 (97.44%), Query Frame = 1 Query: 4 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV 354 D SKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL S LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV Sbjct: 263 DPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSRLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV 379 HSP 2 Score: 144.821 bits (364), Expect = 1.326e-93 Identity = 80/125 (64.00%), Postives = 85/125 (68.00%), Query Frame = 3 Query: 357 GKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTXXXXXXXXXXXXXXXXRFLLQE 731 GKLK SDLDKATQNQLARGQRLRELLKQ+QA PLTV EQI+TIYTGTNGYLDS EI QVRKFL ELR Y+KT KPQF+EIISSTKIFT FL+QE Sbjct: 381 GKLKLELAQFAELEAFAQFSSDLDKATQNQLARGQRLRELLKQSQAKPLTVAEQILTIYTGTNGYLDSFEIAQVRKFLDELRDYVKTRKPQFEEIISSTKIFTEEAQALLKDAIQEQKELFLVQE 505
BLAST of CK937240 vs. ExPASy Swiss-Prot
Match: ATPA_OENEH (ATP synthase subunit alpha, chloroplastic OS=Oenothera elata subsp. hookeri GN=atpA PE=3 SV=2) HSP 1 Score: 218.394 bits (555), Expect = 1.326e-93 Identity = 114/117 (97.44%), Postives = 114/117 (97.44%), Query Frame = 1 Query: 4 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV 354 D SKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL S LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV Sbjct: 263 DPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSRLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV 379 HSP 2 Score: 144.821 bits (364), Expect = 1.326e-93 Identity = 80/125 (64.00%), Postives = 85/125 (68.00%), Query Frame = 3 Query: 357 GKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTXXXXXXXXXXXXXXXXRFLLQE 731 GKLK SDLDKATQNQLARGQRLRELLKQ+QA PLTV EQI+TIYTGTNGYLDS EI QVRKFL ELR Y+KT KPQF+EIISSTKIFT FL+QE Sbjct: 381 GKLKLELAQFAELEAFAQFSSDLDKATQNQLARGQRLRELLKQSQAKPLTVAEQILTIYTGTNGYLDSFEIAQVRKFLDELRDYVKTRKPQFEEIISSTKIFTEEAQALLKDAIQEQKELFLVQE 505
BLAST of CK937240 vs. ExPASy Swiss-Prot
Match: ATPA_OENBI (ATP synthase subunit alpha, chloroplastic OS=Oenothera biennis GN=atpA PE=3 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 1.326e-93 Identity = 114/117 (97.44%), Postives = 114/117 (97.44%), Query Frame = 1 Query: 4 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV 354 D SKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL S LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV Sbjct: 263 DPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSRLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV 379 HSP 2 Score: 144.821 bits (364), Expect = 1.326e-93 Identity = 80/125 (64.00%), Postives = 85/125 (68.00%), Query Frame = 3 Query: 357 GKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTXXXXXXXXXXXXXXXXRFLLQE 731 GKLK SDLDKATQNQLARGQRLRELLKQ+QA PLTV EQI+TIYTGTNGYLDS EI QVRKFL ELR Y+KT KPQF+EIISSTKIFT FL+QE Sbjct: 381 GKLKLELAQFAELEAFAQFSSDLDKATQNQLARGQRLRELLKQSQAKPLTVAEQILTIYTGTNGYLDSFEIAQVRKFLDELRDYVKTRKPQFEEIISSTKIFTEEAQALLKDAIQEQKELFLVQE 505
BLAST of CK937240 vs. ExPASy Swiss-Prot
Match: ATPA_OENAR (ATP synthase subunit alpha, chloroplastic OS=Oenothera argillicola GN=atpA PE=3 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 1.326e-93 Identity = 114/117 (97.44%), Postives = 114/117 (97.44%), Query Frame = 1 Query: 4 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV 354 D SKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL S LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV Sbjct: 263 DPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSRLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV 379 HSP 2 Score: 144.821 bits (364), Expect = 1.326e-93 Identity = 80/125 (64.00%), Postives = 85/125 (68.00%), Query Frame = 3 Query: 357 GKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTXXXXXXXXXXXXXXXXRFLLQE 731 GKLK SDLDKATQNQLARGQRLRELLKQ+QA PLTV EQI+TIYTGTNGYLDS EI QVRKFL ELR Y+KT KPQF+EIISSTKIFT FL+QE Sbjct: 381 GKLKLELAQFAELEAFAQFSSDLDKATQNQLARGQRLRELLKQSQAKPLTVAEQILTIYTGTNGYLDSFEIAQVRKFLDELRDYVKTRKPQFEEIISSTKIFTEEAQALLKDAIQEQKELFLVQE 505
BLAST of CK937240 vs. ExPASy Swiss-Prot
Match: ATPA_ILLOL (ATP synthase subunit alpha, chloroplastic OS=Illicium oligandrum GN=atpA PE=3 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 2.257e-93 Identity = 113/117 (96.58%), Postives = 113/117 (96.58%), Query Frame = 1 Query: 4 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV 354 D SKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK S LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV Sbjct: 263 DPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSRLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV 379 HSP 2 Score: 146.362 bits (368), Expect = 2.257e-93 Identity = 76/106 (71.70%), Postives = 84/106 (79.25%), Query Frame = 3 Query: 417 SDLDKATQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTXXXXXXXXXXXXXXXXRFLLQEQ 734 SDLDKATQNQLARGQRLRELLKQ+Q+AP TVEEQI+TIYTG NGYLD LEIGQV+KFLV+LRT+L+TNKPQFQEII ST+ FT FLLQEQ Sbjct: 401 SDLDKATQNQLARGQRLRELLKQSQSAPFTVEEQIVTIYTGANGYLDLLEIGQVKKFLVQLRTHLRTNKPQFQEIICSTRTFTEQAEALLKEAIQEQIELFLLQEQ 506
BLAST of CK937240 vs. ExPASy Swiss-Prot
Match: ATPA_DIOEL (ATP synthase subunit alpha, chloroplastic OS=Dioscorea elephantipes GN=atpA PE=3 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 5.011e-93 Identity = 114/117 (97.44%), Postives = 114/117 (97.44%), Query Frame = 1 Query: 4 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV 354 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK S LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV Sbjct: 263 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSRLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV 379 HSP 2 Score: 142.51 bits (358), Expect = 5.011e-93 Identity = 76/106 (71.70%), Postives = 81/106 (76.42%), Query Frame = 3 Query: 417 SDLDKATQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTXXXXXXXXXXXXXXXXRFLLQEQ 734 SDLDKATQNQLARGQRLRELLKQ+Q+ PL VEEQI TIYTG NGYLD LEIGQV+KFLV+LRTYLK NK QF+EIISSTK FT FLLQEQ Sbjct: 401 SDLDKATQNQLARGQRLRELLKQSQSDPLAVEEQIATIYTGANGYLDPLEIGQVKKFLVQLRTYLKKNKSQFKEIISSTKTFTEEAEALLKGAVQEQIELFLLQEQ 506
BLAST of CK937240 vs. ExPASy Swiss-Prot
Match: ATPA_JASNU (ATP synthase subunit alpha, chloroplastic OS=Jasminum nudiflorum GN=atpA PE=3 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 5.012e-93 Identity = 113/117 (96.58%), Postives = 113/117 (96.58%), Query Frame = 1 Query: 4 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV 354 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK S LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQ KAMKQV Sbjct: 263 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSNSSLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQTKAMKQV 379 HSP 2 Score: 144.436 bits (363), Expect = 5.012e-93 Identity = 80/124 (64.52%), Postives = 86/124 (69.35%), Query Frame = 3 Query: 357 GKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTXXXXXXXXXXXXXXXXRFLLQ 728 GKLK SDLDKATQ+QLARG+RLRELLKQ+Q+APLTV EQIMT+YTGT GYLDSLEIGQV KFL LRT+LKTNKPQFQEIISSTK FT RFLLQ Sbjct: 381 GKLKLELAQFTELEAFAQFASDLDKATQSQLARGRRLRELLKQSQSAPLTVGEQIMTVYTGTKGYLDSLEIGQVSKFLDALRTHLKTNKPQFQEIISSTKTFTEEAEVLLKEAIQEQMERFLLQ 504
BLAST of CK937240 vs. ExPASy Swiss-Prot
Match: ATPA_ANTFO (ATP synthase subunit alpha, chloroplastic OS=Anthoceros formosae GN=atpA PE=2 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.113e-92 Identity = 114/117 (97.44%), Postives = 115/117 (98.29%), Query Frame = 1 Query: 4 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV 354 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL S LGEGSMTALPIVETQ+GDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV Sbjct: 263 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV 379 HSP 2 Score: 140.198 bits (352), Expect = 1.113e-92 Identity = 77/126 (61.11%), Postives = 84/126 (66.67%), Query Frame = 3 Query: 357 GKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTXXXXXXXXXXXXXXXXRFLLQEQ 734 GKLK SDLDKATQNQLARGQRLRELLKQ+Q+APL VEEQ+ TIYTG NGYLD LE+ QV+KFLV+LR YL TNKPQF EII STK+FT FLLQEQ Sbjct: 381 GKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLAVEEQVATIYTGVNGYLDVLEVEQVKKFLVQLREYLITNKPQFVEIIRSTKVFTEQAEIILKEAIKEHTEFFLLQEQ 506
BLAST of CK937240 vs. ExPASy Swiss-Prot
Match: ATPA_MARPO (ATP synthase subunit alpha, chloroplastic OS=Marchantia polymorpha GN=atpA PE=3 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.113e-92 Identity = 114/117 (97.44%), Postives = 115/117 (98.29%), Query Frame = 1 Query: 4 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV 354 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL S LGEGSMTALPIVETQ+GDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV Sbjct: 263 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSNLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV 379 HSP 2 Score: 140.584 bits (353), Expect = 1.113e-92 Identity = 76/126 (60.32%), Postives = 84/126 (66.67%), Query Frame = 3 Query: 357 GKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTXXXXXXXXXXXXXXXXRFLLQEQ 734 GKLK SDLDKATQNQLARGQRLRELLKQ+Q+APL+VEEQI TIYTG NGYLD LE GQV+KFL++LR YL TNKPQF EII STK+FT FL QE+ Sbjct: 381 GKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLSVEEQIATIYTGVNGYLDVLETGQVKKFLIQLREYLVTNKPQFAEIIRSTKVFTEQAENLLKEAITEHIELFLFQEE 506 The following BLAST results are available for this feature:
BLAST of CK937240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937240 ID=CK937240; Name=CK937240; organism=Citrus sinensis; type=EST; length=806bpback to top |