CK937237

Overview
NameCK937237
Unique NameCK937237
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length605
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937237 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 9.855e-12
Identity = 54/172 (31.40%), Postives = 76/172 (44.19%), Query Frame = 3
Query:   78 MGCFPCFDSREDEKLNPEKEPDDQKQGQPTVSNNISRLPSGRDRLRSRSNGVSKRELHLPKDGAGVNIAAQTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLIYEFMPLGSLEDHLH 593
            M CF C    ED+ ++   +   +        N     P G D    +++  +++   + K      I      F EL  AT +F   S IGEG +GRVY G L +     A+K+LD N  Q + EFL +               +GYC DG+ R+L YEF   GSL D LH
Sbjct:    1 MSCFGCCG--EDDDMHKTADYGGRH-------NQAKHFPPGNDARHHQASETAQKGPPVVKLQP---IEVPIIPFSELKEATDDFGSNSLIGEGSYGRVYYGVLNND-LPSAIKKLDSNK-QPDNEFLAQVSMVSRLKHDNFVQLLGYCVDGNSRILSYEFANNGSLHDILH 158          
BLAST of CK937237 vs. ExPASy Swiss-Prot
Match: Y2242_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g24230 OS=Arabidopsis thaliana GN=At2g24230 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 9.855e-12
Identity = 40/102 (39.22%), Postives = 55/102 (53.92%), Query Frame = 3
Query:  297 TFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLIYEFMPLGSLEDHLHDLP 602
            TF +L +AT NF  ++ + +G FG VY+G+L   G  VAVK L       ++E   E                GYC  GDQR+ IYE+M  G+L++ LHDLP
Sbjct:  535 TFSDLLSATSNFDRDTLLADGKFGPVYRGFLPG-GIHVAVKVLVHGSTLSDQEAARELEFLGRIKHPNLVPLTGYCIAGDQRIAIYEYMENGNLQNLLHDLP 635          
BLAST of CK937237 vs. ExPASy Swiss-Prot
Match: Y5596_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g59680 OS=Arabidopsis thaliana GN=At5g59680 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.287e-11
Identity = 40/106 (37.74%), Postives = 54/106 (50.94%), Query Frame = 3
Query:  273 VNIAAQTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLIYEFMPLGSLEDHL 590
            + +  + FT+ E+   T NF     +GEGGFG V  G +  + QV AVK L ++  QG +EF  E               +GYC +GD   LIYEF+P G L  HL
Sbjct:  563 IEMKKRKFTYSEVTKMTNNFG--RVVGEGGFGVVCHGTVNGSEQV-AVKLLSQSSTQGYKEFKAEVDLLLRVHHTNLVSLVGYCDEGDHLALIYEFVPNGDLRQHL 665          
BLAST of CK937237 vs. ExPASy Swiss-Prot
Match: Y2899_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana GN=At2g28990 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.287e-11
Identity = 39/99 (39.39%), Postives = 53/99 (53.54%), Query Frame = 3
Query:  294 FTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLIYEFMPLGSLEDHL 590
            FT+ E+   T NF  +  +GEGGFG VY G++    QV AVK L ++  QG + F  E               +GYC +G+   LIYE+MP G L+ HL
Sbjct:  567 FTYSEVQEMTNNF--DKALGEGGFGVVYHGFVNVIEQV-AVKLLSQSSSQGYKHFKAEVELLMRVHHINLVSLVGYCDEGEHLALIYEYMPNGDLKQHL 662          
BLAST of CK937237 vs. ExPASy Swiss-Prot
Match: CRK16_ARATH (Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.287e-11
Identity = 37/101 (36.63%), Postives = 56/101 (55.45%), Query Frame = 3
Query:  294 FTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLIYEFMPLGSLEDHLHD 596
            F F+ + AAT NF+  + +G GGFG V+KG   + G  VAVK+L +   QG  EF  E               +G+  +G++++L+YE+MP  SL+  L D
Sbjct:  323 FDFKAIEAATNNFQKSNKLGHGGFGEVFKGTFPN-GTEVAVKRLSKISGQGEEEFKNEVLLVAKLQHRNLVRLLGFSVEGEEKILVYEYMPNKSLDYFLFD 422          
BLAST of CK937237 vs. ExPASy Swiss-Prot
Match: CRK14_ARATH (Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana GN=CRK14 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.287e-11
Identity = 37/101 (36.63%), Postives = 54/101 (53.47%), Query Frame = 3
Query:  294 FTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLIYEFMPLGSLEDHLHD 596
            F F+ +  AT  F   + IG GGFG V+ G L  T   VA+K+L +   QG REF  E               +G+C +G++++L+YEF+P  SL+  L D
Sbjct:  325 FDFKAIEDATNKFSESNIIGRGGFGEVFMGVLNGTE--VAIKRLSKASRQGAREFKNEVVVVAKLHHRNLVKLLGFCLEGEEKILVYEFVPNKSLDYFLFD 423          
BLAST of CK937237 vs. ExPASy Swiss-Prot
Match: Y5188_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.681e-11
Identity = 40/98 (40.82%), Postives = 52/98 (53.06%), Query Frame = 3
Query:  297 TFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLIYEFMPLGSLEDHL 590
            T+ E+   T NF  E  +G+GGFG VY G LE T   VAVK L  +  QG +EF  E               +GYC DGD   LIYE+M  G L++++
Sbjct:  557 TYPEVLKMTNNF--ERVLGKGGFGTVYHGNLEDTQ--VAVKMLSHSSAQGYKEFKAEVELLLRVHHRNLVGLVGYCDDGDNLALIYEYMANGDLKENM 650          
BLAST of CK937237 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.681e-11
Identity = 39/101 (38.61%), Postives = 55/101 (54.46%), Query Frame = 3
Query:  288 QTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLIYEFMPLGSLEDHL 590
            +++T+ E+A  T NF  E  +GEGGFG VY G +    QV AVK L  +  QG ++F  E               +GYC +G   +LIYE+M  G+L+ HL
Sbjct:  579 RSYTYEEVAVITNNF--ERPLGEGGFGVVYHGNVNDNEQV-AVKVLSESSAQGYKQFKAEVDLLLRVHHINLVTLVGYCDEGQHLVLIYEYMSNGNLKQHL 676          
BLAST of CK937237 vs. ExPASy Swiss-Prot
Match: WAKLJ_ARATH (Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.681e-11
Identity = 42/108 (38.89%), Postives = 60/108 (55.56%), Query Frame = 3
Query:  282 AAQTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQ---LDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLIYEFMPLGSLEDHLHD 596
            + + F  REL  AT+NF     +GEGG G VYKG L   G++VAVK+   +D + L+   EF+ E               +G C + D  +L+YEF+P G+L +HLHD
Sbjct:  417 STRVFNSRELEKATENFSLTRILGEGGQGTVYKGMLVD-GRIVAVKKSKVVDEDKLE---EFINEVVILSQINHRNIVKLLGCCLETDVPILVYEFIPNGNLFEHLHD 520          
BLAST of CK937237 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.195e-11
Identity = 44/119 (36.97%), Postives = 57/119 (47.90%), Query Frame = 3
Query:  234 SKRELHLPKDGAGVNIAAQTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLIYEFMPLGSLEDHL 590
            S R LH  +    +    +  T+ E+   T NF  E  IGEGGFG VY G+L  + QV AVK L  +  QG +EF  E               +GYC +     LIYE+M  G L+ HL
Sbjct:  543 SIRALHPSRANLSLENKKRRITYSEILLMTNNF--ERVIGEGGFGVVYHGYLNDSEQV-AVKVLSPSSSQGYKEFKAEVELLLRVHHINLVSLVGYCDEQAHLALIYEYMANGDLKSHL 658          
The following BLAST results are available for this feature:
BLAST of CK937237 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
Y2706_ARATH9.855e-1231.40Probable receptor-like protein kinase At2g47060 OS... [more]
Y2242_ARATH9.855e-1239.22Probable LRR receptor-like serine/threonine-protei... [more]
Y5596_ARATH1.287e-1137.74Probable LRR receptor-like serine/threonine-protei... [more]
Y2899_ARATH1.287e-1139.39Probable leucine-rich repeat receptor-like protein... [more]
CRK16_ARATH1.287e-1136.63Putative cysteine-rich receptor-like protein kinas... [more]
CRK14_ARATH1.287e-1136.63Cysteine-rich receptor-like protein kinase 14 OS=A... [more]
Y5188_ARATH1.681e-1140.82Probable LRR receptor-like serine/threonine-protei... [more]
Y4245_ARATH1.681e-1138.61Probable LRR receptor-like serine/threonine-protei... [more]
WAKLJ_ARATH1.681e-1138.89Wall-associated receptor kinase-like 10 OS=Arabido... [more]
Y5169_ARATH2.195e-1136.97Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004512_F04 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IIIF_F04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937237 ID=CK937237; Name=CK937237; organism=Citrus sinensis; type=EST; length=605bp
TTTTTTTTTTATAAGGATTTGAAAGATTTGATTTTTATTTTTTTTCCCTT
TTTGTGTGGCGGGTTTGATTTCGGGAGATGGGTTGTTTTCCTTGTTTTGA
TTCGAGGGAAGATGAGAAGTTGAATCCAGAGAAAGAACCCGATGATCAAA
AGCAAGGACAACCAACGGTCTCCAATAACATTTCCAGATTGCCTTCTGGA
AGAGACAGACTTAGATCAAGAAGTAATGGAGTCTCGAAAAGGGAATTGCA
CCTTCCCAAAGATGGGGCTGGTGTCAATATTGCTGCTCAAACATTTACAT
TTCGTGAGCTTGCTGCTGCAACAAAGAATTTTAGACCAGAGAGTTTCATA
GGGGAAGGAGGATTTGGACGTGTGTACAAGGGGTGGCTTGAGAGCACTGG
TCAGGTCGTTGCTGTCAAGCAATTGGATAGAAATGGCCTTCAGGGTAATA
GGGAGTTTCTTGTGGAGGTCCTCATGCTTAGCCTTCTTCATCACTCTAAC
CTAGTGAACTTGATTGGATATTGTGCTGATGGGGACCAACGGCTTCTTAT
CTACGAATTTATGCCTTTGGGATCCTTGGAAGATCACCTTCATGATTTAC
CACCT
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