CK937233

Overview
NameCK937233
Unique NameCK937233
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length761
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937233 vs. ExPASy Swiss-Prot
Match: GLT2_ARATH (Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana GN=At1g18980 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.945e-43
Identity = 94/198 (47.47%), Postives = 126/198 (63.64%), Query Frame = 2
Query:  125 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLG*PGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 718
            +D   LQD CV   D K    +NG  CK      A DFFFSGLG P NT+   GV  + ANV   PGLNTLG+S   +++AP G  PPH HPRA+E  +V+EG+++VGF+T+   NNTL +KVLN G++FV P+GL+HFQ+N+GK  A   ++ NSQ PG   +   +FG+NP+I    L K F+ D   V  L++KF
Sbjct:   28 SDSDPLQDFCVG--DLKASPSINGFPCKSS--VSASDFFFSGLGGPLNTSTPNGVAVSPANVLTFPGLNTLGLSMNNVEFAPGGVNPPHSHPRATEAGVVIEGSVFVGFLTT---NNTLFSKVLNAGEMFVVPRGLVHFQWNVGKVKARLITSFNSQLPGSAVLPSTLFGSNPTIPNAVLTKTFRTDDVTVNKLKSKF 218          
BLAST of CK937233 vs. ExPASy Swiss-Prot
Match: GLT1_ARATH (Germin-like protein subfamily T member 1 OS=Arabidopsis thaliana GN=GLP1 PE=2 SV=2)

HSP 1 Score: 176.022 bits (445), Expect = 1.945e-43
Identity = 93/198 (46.97%), Postives = 127/198 (64.14%), Query Frame = 2
Query:  125 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLG*PGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 718
            +D   LQD CV   D K    +NG  CK      A DFF+SGLG P +T+N  GV    ANV   PGLNTLGIS   ++ AP G  PPH+HPRA+E+  V+EG+++VGF+++   NNTL +KVLN G+ FV P+GL+HFQ+N+G+  A   +A NSQ PG V +   +FG+ P I    L +AF+ D   V++L++KF
Sbjct:   28 SDSDPLQDFCVG--DLKASASINGFPCKSA--VSASDFFYSGLGGPLDTSNPNGVTVAPANVLTFPGLNTLGISMNNVELAPGGVNPPHLHPRATEVGTVIEGSVFVGFLST---NNTLFSKVLNAGEAFVIPRGLVHFQWNVGQVKARMITAFNSQLPGAVVLPSTLFGSKPEIPNAVLTRAFRTDDTTVQNLKSKF 218          
BLAST of CK937233 vs. ExPASy Swiss-Prot
Match: NEC1_NICLS (Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana sanderae GN=NECI PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.540e-43
Identity = 99/197 (50.25%), Postives = 126/197 (63.96%), Query Frame = 2
Query:  128 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLG*PGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 718
            D   LQDVCVA  D    V VNG  CK      A DF    +  PG T N+ G   T ANVEQ+PGLNTLG+S  RIDYAP G  PPH HPRASE+  V+EG L VGF+T+    N L++K + KG+VFVFP+GL+HFQ N G+  AA  SA NSQ PG  +I   +FGA+P +  D L + FQ++ + V+ +++KF
Sbjct:   34 DEDMLQDVCVA--DLHSKVKVNGFPCKTN--FTAADFSSLAISKPGATNNKFGSVVTTANVEQVPGLNTLGVSLARIDYAPGGINPPHTHPRASEMVFVMEGELDVGFITT---ANVLVSKKIIKGEVFVFPRGLVHFQKNNGEVPAAVISAFNSQLPGTQSIPITLFGASPPVPDDVLAQTFQINTEDVQQIKSKF 223          
BLAST of CK937233 vs. ExPASy Swiss-Prot
Match: RHRE_PEA (Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 1.261e-42
Identity = 98/197 (49.75%), Postives = 121/197 (61.42%), Query Frame = 2
Query:  128 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLG*PGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 718
            D   LQD+CVA  D    + VNG  CK      AEDFF + L   G T N  G   T ANV++IPGLNTLG+S  RIDYAP G  PPH HPRA+E+  VLEG L VGF+T+    N LIAK + KG+ FVFP+GL+HFQ N G   A   +  NSQ PG V I   +F A P +  + L KAFQ+  K V+ +++KF
Sbjct:   22 DADALQDLCVA--DYASVILVNGFACKPASNVTAEDFFSNLLVKQGATNNTFGSLVTGANVQRIPGLNTLGVSMARIDYAPGGLNPPHTHPRATEMVFVLEGQLDVGFITT---TNQLIAKTIAKGETFVFPKGLVHFQKNNGWEPATVIAGFNSQLPGTVNIPLTLFNATPPVPDNVLTKAFQIGTKEVQKIKSKF 213          
BLAST of CK937233 vs. ExPASy Swiss-Prot
Match: GER2_WHEAT (Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.297e-41
Identity = 93/202 (46.04%), Postives = 127/202 (62.87%), Query Frame = 2
Query:  125 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSG-LG*PGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAFQLDPKIVKDLQNKFING 727
            TDP  LQD CVA  D K  V VNG  CK P     +DF FS  L   GNT+   G   T+ +V + PG NTLG+S  R+D+AP G  PPHIHPRA+EI +V++G L VG + S    N L ++V+  G+ F+ P+GL+HFQFN+GKT A+   + NSQ PG V +   +FG+NP I    L KA +++ ++V+ L++KF  G
Sbjct:   24 TDPDPLQDFCVADLDGK-AVSVNGHTCK-PMSEAGDDFLFSSKLAKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLTKALRVEARVVELLKSKFAAG 223          
BLAST of CK937233 vs. ExPASy Swiss-Prot
Match: GL21_ARATH (Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana GN=GLP4 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.918e-41
Identity = 90/169 (53.25%), Postives = 108/169 (63.91%), Query Frame = 2
Query:  128 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLG*PGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADAVFG 634
            DP  LQD+CVA  D   G+ +NG  CKD     + DFF  GL  PG T N  G   T ANV  IPGLNTLG+S  RIDYAP G  PPH HPRA+E+  VLEGTL VGF+T+    N LI++ L KGDVF FP+GL+HFQ N G   A+  +A NSQ PG  ++   +FG
Sbjct:   24 DPDMLQDLCVA--DLPSGIKINGFPCKDAATVTSADFFSQGLAKPGLTNNTFGALVTGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVFVLEGTLDVGFLTT---ANKLISQSLKKGDVFAFPKGLVHFQKNNGDVPASVIAAFNSQLPGTQSLGATLFG 187          
BLAST of CK937233 vs. ExPASy Swiss-Prot
Match: GER3_WHEAT (Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.433e-40
Identity = 92/203 (45.32%), Postives = 125/203 (61.58%), Query Frame = 2
Query:  125 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSG-LG*PGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAFQLDPKIVKDLQNKFINGN 730
            ++P  LQD CVA  D K  V VNG  CK P     +DF FS  L   GNT+   G   TD NV + PG NTLG+S  R+D+AP G  PPHIHPRA+EI +V++G L VG + S    N L ++V+  G+ F+ P+GL+HFQFN+GKT A+     NSQ P  V +   +FG+NP I    L KA +++  +V+ L++KF  G+
Sbjct:   24 SNPHPLQDFCVADLDGK-AVSVNGHMCK-PMSEAGDDFLFSSKLAKAGNTSTPNGSAVTDLNVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVFFNSQSPSVVFVPLTLFGSNPPIPKPVLTKALRVEAGVVELLKSKFAGGS 224          
BLAST of CK937233 vs. ExPASy Swiss-Prot
Match: OXO2_HORVU (Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 9.989e-40
Identity = 91/202 (45.05%), Postives = 126/202 (62.38%), Query Frame = 2
Query:  125 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSG-LG*PGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAFQLDPKIVKDLQNKFING 727
            +DP  LQD CVA  D K  V VNG  CK P     +DF FS  L   GNT+   G   T+ +V + PG NTLG+S  R+D+AP G  PPH+HPRA+EI +V++G L VG + S    N L ++V+  G+ F+ P+GL+HFQFN+GKT A+   + NSQ PG V +   +FG+NP I    L KA +++  +V+ L++KF  G
Sbjct:   24 SDPDPLQDFCVADLDGK-AVSVNGHPCK-PMSEAGDDFLFSSKLAKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHVHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLTKALRVEAGVVELLKSKFAAG 223          
BLAST of CK937233 vs. ExPASy Swiss-Prot
Match: OXO1_HORVU (Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.305e-39
Identity = 92/203 (45.32%), Postives = 126/203 (62.07%), Query Frame = 2
Query:  125 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSG-LG*PGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAFQLDPKIVKDLQNKFINGN 730
            +DP  LQD CVA  D K  V VNG  CK P     +DF FS  L   GNT+   G   T+ +V + PG NTLG+S  R+D+AP G  PPHIHPRA+EI +V++G L VG + S    N L ++V+  G+ FV P+GL+HFQFN+GKT A    + NSQ PG V +   +FG++P I    L KA +++  +V+ L++KF  G+
Sbjct:    1 SDPDPLQDFCVADLDGK-AVSVNGHTCK-PMSEAGDDFLFSSKLTKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQNPGIVFVPLTLFGSDPPIPTPVLTKALRVEAGVVELLKSKFAGGS 201          
BLAST of CK937233 vs. ExPASy Swiss-Prot
Match: GL51_ORYSJ (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica GN=Os05g0197200 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.305e-39
Identity = 101/204 (49.51%), Postives = 124/204 (60.78%), Query Frame = 2
Query:  128 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLG*P------GNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAFQLDPKIVKDLQNKFI 721
            DP  LQD CVA  DP   V VNG  CKDP    A+DFFFSG+G P      G TA+R     T  +V+ IPGLNTLG SA R+D AP G  PPH HPRASE  +VL G +Y GFVTS   ++ ++AKVL +GDVF  PQGL+HF  N G   AA Y++L+SQ PG V +ADA+  A   +  D + K    D   V  ++  FI
Sbjct:   30 DPNPLQDFCVA--DPTSKVRVNGLPCKDPAAVTADDFFFSGVGEPAAGGGRGATASRR-YGFTARSVD-IPGLNTLGASAARVDVAPGGVFPPHYHPRASETAVVLAGAVYFGFVTS-YPDSRVVAKVLRRGDVFAVPQGLVHFLHNNGSEPAALYASLSSQNPGLVLVADALLAA--PLPVDLVAKTLLTDEATVDKIRANFI 226          
The following BLAST results are available for this feature:
BLAST of CK937233 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GLT2_ARATH1.945e-4347.47Germin-like protein subfamily T member 2 OS=Arabid... [more]
GLT1_ARATH1.945e-4346.97Germin-like protein subfamily T member 1 OS=Arabid... [more]
NEC1_NICLS2.540e-4350.25Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana s... [more]
RHRE_PEA1.261e-4249.75Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1... [more]
GER2_WHEAT5.297e-4146.04Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 S... [more]
GL21_ARATH6.918e-4153.25Germin-like protein subfamily 2 member 1 OS=Arabid... [more]
GER3_WHEAT3.433e-4045.32Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 S... [more]
OXO2_HORVU9.989e-4045.05Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1[more]
OXO1_HORVU1.305e-3945.32Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1[more]
GL51_ORYSJ1.305e-3949.51Germin-like protein 5-1 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004512_E12 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IIIF_E12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937233 ID=CK937233; Name=CK937233; organism=Citrus sinensis; type=EST; length=761bp
GGGGAATCACAACACTTGATTAAAGTTTGAGATAGGCACATCCTGTGACT
TAATCACCATGAAGGTAATTCAATTTCTTATAGGTTTTGCCCTCTTGGCT
TTGGCTTCTTCTTTGGCCTCTGCCACTGACCCTGGCCATCTTCAAGATGT
CTGTGTAGCCATCAATGACCCCAAGGATGGTGTGTTTGTGAATGGGAAGT
TCTGCAAGGACCCCAAGCTTGCGAGAGCAGAAGATTTCTTCTTCTCAGGG
CTAGGCTAGCCTGGAAACACAGCAAATCGACTTGGTGTTGATGAAACAGA
TGCAAATGTTGAGCAAATTCCAGGACTCAACACCCTTGGCATATCAGCAT
TCCGTATTGACTATGCACCATATGGCCAAAGGCCACCTCACATTCACCCC
CGTGCCAGCGAAATCTTCTTAGTCCTGGAAGGAACTCTTTATGTCGGTTT
TGTGACATCAGACCAACTGAATAACACACTCATCGCAAAAGTTCTAAATA
AGGGAGATGTTTTTGTGTTTCCACAAGGTTTGATTCACTTCCAATTCAAC
ATTGGAAAAACAAATGCTGCTGCCTATTCTGCTCTAAACAGCCAATTCCC
GGGTGAAGTTACCATAGCCGACGCAGTCTTTGGAGCCAATCCTTCAATCA
ATCCCGATTTTCTTGGCAAGGCATTCCAGTTGGACCCAAAGATAGTGAAA
GATCTTCAAAATAAGTTCATTAATGGCAATTAGGAGAAGGAATTAATGAG
CTTTAATATAA
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