CK937229

Overview
NameCK937229
Unique NameCK937229
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length720
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937229 vs. ExPASy Swiss-Prot
Match: GL11_ARATH (Germin-like protein subfamily 1 member 1 OS=Arabidopsis thaliana GN=GLP7 PE=2 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 2.620e-31
Identity = 75/190 (39.47%), Postives = 111/190 (58.42%), Query Frame = 3
Query:  126 TDPGHLQDVCVAINDPK-DGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANR-LGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAA-AYSALNSQFPGEVTIANTVFGANPSINPDFLGKAFQLD 686
            +DP  LQD CV+        +F+NGK CKDP  A   DF  S L +PGNT  +   ++ T      +PGLNT+G++  R+D+   G  PPH HPRASE+ + L+G L VGFV +   +  +  + L+ G+ FVFP+GLIHF +NI   ++A A S L+SQ PG   ++ + F + P    + L  A+ ++
Sbjct:   18 SDPDPLQDYCVSPPPSSHQQIFLNGKLCKDPTQASVSDFSTSALSRPGNTKTKPFMINVTVTTTANLPGLNTVGLTMARLDFGGSGVVPPHVHPRASEVTVCLDGVLLVGFVDT---SGRVFTQELHPGETFVFPKGLIHFLYNIDTVSSALAVSGLSSQNPGTQIVSLSSFISKPPFLVEVLKSAYDIN 204          
BLAST of CK937229 vs. ExPASy Swiss-Prot
Match: GL24_ORYSJ (Germin-like protein 2-4 OS=Oryza sativa subsp. japonica GN=Os02g0532500 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.622e-31
Identity = 82/201 (40.80%), Postives = 106/201 (52.74%), Query Frame = 3
Query:  129 DPGHLQDVCV---AINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDY-APYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIANTVFGANPSINPDFLGKAFQLDPKIVKDXXNKF 719
            DP  +QD CV       P +   +    C+ P    A DF +SG+   GN +   G         Q PGL+TLG+S  R D  A  G  PPH+HPRA+E  LVL G +Y GFV S      L AKVL +G+V VFP+ ++HFQ N+G T A  Y A NS+ PG V I  TVFG+   I    L +AF L P  ++    +F
Sbjct:   24 DPDAVQDFCVPDAGRGRPVELAMLPAYPCRSPANLTAGDFAFSGVRAAGNFSPETGFAGVSVTPAQFPGLHTLGMSFARADLSAAGGVNPPHYHPRATETALVLAGRVYAGFVDS---GGRLFAKVLEQGEVMVFPRAMVHFQLNVGDTPATVYGAFNSENPGIVRIPATVFGS--GIREAVLERAFGLTPAELRRLEKRF 219          
BLAST of CK937229 vs. ExPASy Swiss-Prot
Match: AB19A_PRUPE (Auxin-binding protein ABP19a OS=Prunus persica GN=ABP19A PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.955e-31
Identity = 76/155 (49.03%), Postives = 89/155 (57.42%), Query Frame = 3
Query:  141 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPG 605
            +QD CVA     DG    G  CK P      DF YSGLG  GNT N +    T A   Q PG+N LGIS  R+D  P G  P H HP ASE+ LV++GT+  GFV SD   NT   K L KGD+ VFPQGL+HFQ N G T A A+ + +S  PG
Sbjct:   20 VQDFCVADYKAPDGPA--GYSCKKPAKVTINDFVYSGLGIAGNTTNIIKAAVTPAFAAQFPGVNGLGISLARLDLGPGGVIPFHTHPGASEVLLVVQGTIIAGFVASD---NTPYLKTLKKGDIMVFPQGLLHFQVNGGGTPALAFPSFSSPSPG 169          
BLAST of CK937229 vs. ExPASy Swiss-Prot
Match: GL31_ARATH (Germin-like protein subfamily 3 member 1 OS=Arabidopsis thaliana GN=GLP1 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.318e-29
Identity = 81/187 (43.32%), Postives = 101/187 (54.01%), Query Frame = 3
Query:  141 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIANTVFGANPSINPDFLGKAFQLDPKIVK 701
            +QD CVA  + K      G  C  P   +A DF +SGLG PGNT N +    T A   Q PGLN LG+S  R+D AP G  P H HP ASE+  VL G++  GFV+S    N +  + L  G V VFPQGL+HFQ N GK++A+A    NS  PG + I +    AN       +G  F LD   VK
Sbjct:   19 VQDFCVA--NLKRAETPAGYPCIRPIHVKATDFVFSGLGTPGNTTNIINAAVTPAFAAQFPGLNGLGLSTARLDLAPKGVIPMHTHPGASEVLFVLTGSITAGFVSS---ANAVYVQTLKPGQVMVFPQGLLHFQINAGKSSASAVVTFNSANPG-LQILDFALFANSLPTELVVGTTF-LDATTVK 198          
BLAST of CK937229 vs. ExPASy Swiss-Prot
Match: ABP20_PRUPE (Auxin-binding protein ABP20 OS=Prunus persica GN=ABP20 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.318e-29
Identity = 72/155 (46.45%), Postives = 91/155 (58.71%), Query Frame = 3
Query:  141 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPG 605
            +QD CVA     +G    G  CK P   +  DF +SGLG  GNT+N +    T A V Q PG+N LGIS  R+D A  G  P H HP ASE+ +V +GT+  GFV SD   NT   + L KGD+ VFPQGL+HFQ N G+  A A+++  S  PG
Sbjct:   25 VQDFCVADLAAPEGPA--GFSCKKPASVKVNDFVFSGLGIAGNTSNIIKAAVTPAFVAQFPGVNGLGISIARLDLAVGGVVPFHTHPGASEVLIVAQGTICAGFVASD---NTPYLQTLEKGDIMVFPQGLLHFQVNGGEAPALAFASFGSASPG 174          
BLAST of CK937229 vs. ExPASy Swiss-Prot
Match: GL33_ARATH (Germin-like protein subfamily 3 member 3 OS=Arabidopsis thaliana GN=GER3 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.541e-28
Identity = 69/155 (44.52%), Postives = 90/155 (58.06%), Query Frame = 3
Query:  141 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPG 605
            +QD CVA  DPK     +G  CK+P      DF ++GLG  GNT+N +    T A      G+N LG+S  R+D A  G  P H HP ASE+ +V++GT+  GF++S    N +  K LN+GD  VFPQGL+HFQ N GK  A A+ A  S  PG
Sbjct:   22 VQDFCVA--DPKGPQSPSGYSCKNPDQVTENDFAFTGLGTAGNTSNIIKAAVTPAFAPAYAGINGLGVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAGFISS---ANKVYLKTLNRGDSMVFPQGLLHFQLNSGKGPALAFVAFGSSSPG 171          
BLAST of CK937229 vs. ExPASy Swiss-Prot
Match: GLP1_SINAL (Germin-like protein 1 OS=Sinapis alba GN=GLP1 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.624e-28
Identity = 70/155 (45.16%), Postives = 90/155 (58.06%), Query Frame = 3
Query:  141 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPG 605
            +QD CVA  DPK     +G  CK+P      DF +SGLGK GNT+N +    T A      GLN L +S  R+D A  G  P H HP ASE+ +V++GT+  GF++S    N +  K L++GD  VFPQGL+HFQ N GK  A A+ A  S  PG
Sbjct:   22 VQDFCVA--DPKGPQNPSGYSCKNPDQVTENDFAFSGLGKAGNTSNVIKAAVTPAFAPAFAGLNGLDVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAGFISS---ANKVYLKTLSRGDSMVFPQGLLHFQLNSGKGPALAFVAFGSSSPG 171          
BLAST of CK937229 vs. ExPASy Swiss-Prot
Match: GL34_ARATH (Germin-like protein subfamily 3 member 4 OS=Arabidopsis thaliana GN=At5g61750 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.039e-28
Identity = 72/169 (42.60%), Postives = 96/169 (56.80%), Query Frame = 3
Query:  129 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIANTVFG 635
            D  ++QD C      +   F+NG  CK+P    A+DF  + L + G+T N L  + T     + PGLNTLG+S  R D    G  P H HPR+SE+  V++G ++ GFV +   NN +   VL KGDVFVFP+GL+HF  + G   A A+S  NSQ PG V I   VFG
Sbjct:   19 DSDNMQDTCPTAPGEQSIFFINGYPCKNPTKITAQDFKSTKLTEAGDTDNYLQSNVTLLTALEFPGLNTLGLSVSRTDLERDGSVPFHSHPRSSEMLFVVKGVVFAGFVDT---NNKIFQTVLQKGDVFVFPKGLLHFCLSGGFEPATAFSFYNSQNPGVVNIGE-VFG 183          
BLAST of CK937229 vs. ExPASy Swiss-Prot
Match: GL111_ORYSJ (Germin-like protein 11-1 OS=Oryza sativa subsp. japonica GN=Os11g0537300 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.677e-27
Identity = 70/175 (40.00%), Postives = 90/175 (51.43%), Query Frame = 3
Query:  126 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIANTVFGANPSI 650
            +D   LQDVC      +  +F+NG FCK P    A DF    L   G+  N +          + PGLNTLGIS  R D A  G   PH HPRASE+  V  G++  GF  +      L  K L +GDVF+FP+GL+HF  N G   A  +S LNSQ PG V I + +F  +  +
Sbjct:   23 SDSPPLQDVCPMAPQGERKLFMNGFFCKSPSTIMASDFKTLLLNHAGDLDNMVRSSANIITATEFPGLNTLGISMARTDIAVSGAVLPHSHPRASEMMFVHSGSVVAGFFDT---KGKLFQKTLAEGDVFIFPRGLVHFIMNYGFGLATTFSVLNSQNPGVVGITHAMFAPDSEV 194          
BLAST of CK937229 vs. ExPASy Swiss-Prot
Match: GLP1_BRANA (Germin-like protein 1 OS=Brassica napus GN=GER1 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.721e-27
Identity = 78/187 (41.71%), Postives = 102/187 (54.55%), Query Frame = 3
Query:  141 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIANTVFGANPSINPDFLGKAFQLDPKIVK 701
            +QD CVA  + K      G  C  P   +A DF +S LG PGNT N +    T   V Q P LN LGIS  R+D AP G  P H HP ASE+  VL+G++  GF++S    N++  + L  G V VFPQGL+HFQ N GKT AAA    +S  PG + I +    AN +++ + +     L P  VK
Sbjct:   19 VQDFCVA--NLKRAETPAGYPCIRPIHVKASDFVFS-LGTPGNTTNIISAAVTPGFVAQFPALNGLGISTARLDLAPKGVIPMHTHPGASEVLFVLDGSITAGFISS---ANSVYVQTLKPGQVMVFPQGLLHFQINAGKTPAAALVTFSSASPG-LQILDFALFAN-TLSTELVSATTFLPPATVK 197          
The following BLAST results are available for this feature:
BLAST of CK937229 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL11_ARATH2.620e-3139.47Germin-like protein subfamily 1 member 1 OS=Arabid... [more]
GL24_ORYSJ7.622e-3140.80Germin-like protein 2-4 OS=Oryza sativa subsp. jap... [more]
AB19A_PRUPE9.955e-3149.03Auxin-binding protein ABP19a OS=Prunus persica GN=... [more]
GL31_ARATH9.318e-2943.32Germin-like protein subfamily 3 member 1 OS=Arabid... [more]
ABP20_PRUPE9.318e-2946.45Auxin-binding protein ABP20 OS=Prunus persica GN=A... [more]
GL33_ARATH3.541e-2844.52Germin-like protein subfamily 3 member 3 OS=Arabid... [more]
GLP1_SINAL4.624e-2845.16Germin-like protein 1 OS=Sinapis alba GN=GLP1 PE=2... [more]
GL34_ARATH6.039e-2842.60Germin-like protein subfamily 3 member 4 OS=Arabid... [more]
GL111_ORYSJ6.677e-2740.00Germin-like protein 11-1 OS=Oryza sativa subsp. ja... [more]
GLP1_BRANA8.721e-2741.71Germin-like protein 1 OS=Brassica napus GN=GER1 PE... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004512_G07 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IIIF_G07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937229 ID=CK937229; Name=CK937229; organism=Citrus sinensis; type=EST; length=720bp
GGGGAAATCACAACACTTGATTAAAGTTTGAGATAGGCACATCCTGCGAC
TTAATCACCATGAAGGTAATTCAATTTCTTATAGGTTTTGCCCTCTTGGC
TTTGGCTTCTTCTTTGGCCTCTGCCACTGACCCTGGCCATCTTCAAGATG
TCTGTGTAGCCATCAATGACCCCAAGGATGGTGTGTTTGTGAATGGGAAG
TTCTGTAAGGACCCCAAGCTTGCGAGAGCAGAAGATTTCTTCTACTCAGG
GCTAGGCAAGCCTGGAAACACAGCAAATCGACTTGGTGTTGATGAAACAG
ATGCAAATGTTGAACAAATTCCAGGACTCAACACCCTTGGCATATCAGCA
TTCCGCATTGACTATGCACCATATGGCCAAAGGCCACCTCACTTTCACCC
CCGTGCCAGTGAAATCTTCTTAGTCCTGGAAGGAACTCTTTATGTCGGTT
TTGTGACATCAGACCAACTGAATAACACACTCATCGCAAAAGTTCTAAAT
AAGGGAGATGTTTTTGTGTTTCCACAAGGTTTGATTCACTTCCAATTCAA
CATTGGAAAAACAAATGCAGCTGCTTATTCTGCTCTAAACAGCCAATTCC
CGGGTGAAGTTACCATAGCCAACACAGTCTTTGGAGCCAATCCTTCAATC
AATCCCGATTTTCTTGGCAAGGCATTCCAGTTGGATCCAAAGATAGTGAA
AGATCNNNAAAATAAGTTCA
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