CK937173

Overview
NameCK937173
Unique NameCK937173
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length530
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937173 vs. ExPASy Swiss-Prot
Match: GDL1_CARPA (GDSL esterase/lipase OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.440e-15
Identity = 56/167 (33.53%), Postives = 82/167 (49.10%), Query Frame = 2
Query:    8 IDFPTKKPTGRFSNGKNAADFIAEKVGLPSSPPYLAVKSNKNKASFLTGVSFASGGAGIFNSSDQSLAQSITLTKQVDYYGTVHKDLVQQMGPSAAQEHLSKSLFAIVVGSNDISDYSGKSDLRKKSTPEQFVNLMAATLKGQLKRLYGYGARKFVCVXLGVIGCIP 508
            IDFP     GR+S+G+   DFIAE +G+P  PP L        A+F +GV+FA+  A I  +  Q+L    TL  QV  +         Q+  +       K ++   +G+ND  +Y+  +        E FV+ + A LK QL  +YG G RKF    L  +GC+P
Sbjct:   60 IDFPN----GRWSDGRIVPDFIAEFLGIPFPPPVL-----DRSANFSSGVTFATADATILGTPPQTL----TLGDQVKAFA--------QIKSTWTDAQRQKGIYMFYIGANDYLNYTNANLNATAQQQEAFVSQVIAKLKDQLLAIYGLGGRKFAFQNLAPLGCLP 205          
BLAST of CK937173 vs. ExPASy Swiss-Prot
Match: GDL23_ARATH (GDSL esterase/lipase At1g58430 OS=Arabidopsis thaliana GN=At1g58430 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.457e-15
Identity = 54/173 (31.21%), Postives = 86/173 (49.71%), Query Frame = 2
Query:    5 GIDFPTKKPTGRFSNGKNAADFIAEKVGLPS-SPPYLAVKSNKNKASFLTGVSFASGGAGIFNSSDQSLAQSITLTKQVDYYGTVHKDLVQQMGPSAAQEHLSKSLFAIVVGSND--ISDYSGKSDLRKKSTPEQFVNLMAATLKGQLKRLYGYGARKFVCVXLGVIGCIPAQ 514
            GID P   P GRFSNGK  +D IA K+ +    PP+L  + N      +TGV FAS GAG ++       Q+I +++Q + + +    L   +G   A + ++ +L  +  G ND  ++ Y   S  R   +   + + + + L   +K LY  G RK +   L  +GC+P Q
Sbjct:   65 GIDLPNHSPNGRFSNGKIFSDIIATKLNIKQFVPPFL--QPNLTDQEIVTGVCFASAGAG-YDDQTSLTTQAIRVSEQPNMFKSYIARLKSIVGDKKAMKIINNALVVVSAGPNDFILNYYEVPSWRRMYPSISDYQDFVLSRLNNFVKELYSLGCRKILVGGLPPMGCLPIQ 234          
BLAST of CK937173 vs. ExPASy Swiss-Prot
Match: APG2_ARATH (GDSL esterase/lipase APG OS=Arabidopsis thaliana GN=APG PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 9.336e-15
Identity = 57/174 (32.76%), Postives = 85/174 (48.85%), Query Frame = 2
Query:    5 GIDFPTKKPTGRFSNGKNAADFIAEKVGLPSSPP-YLAVK-SNKNKASFLTGVSFASGGAGIFNSSDQSLAQSITLTKQVDYYGTVHKDLVQQMGPSAAQEHLSKSLFAIVVGSND-ISDYSGKSDLRKKSTPEQFVNLMAATLKGQLKRLYGYGARKFVCVXLGVIGCIPAQR 517
            G DF   K TGRF NGK A D  AE +G    PP YL+ + S KN    L G +FAS  +G ++     L  +I L +QV+Y+      L++  G   A   +  ++  +  GS+D + +Y     L K  T + + + +       +K++Y  GARK     L   GC+PA R
Sbjct:   59 GRDFANHKATGRFCNGKLATDITAETLGFTKYPPAYLSPEASGKN---LLIGANFASAASG-YDDKAALLNHAIPLYQQVEYFKEYKSKLIKIAGSKKADSIIKGAICLLSAGSSDFVQNYYVNPLLYKVYTVDAYGSFLIDNFSTFIKQVYAVGARKIGVTSLPPTGCLPAAR 228          
BLAST of CK937173 vs. ExPASy Swiss-Prot
Match: GLIP3_ARATH (GDSL esterase/lipase 3 OS=Arabidopsis thaliana GN=GLIP3 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 1.592e-14
Identity = 53/170 (31.18%), Postives = 85/170 (50.00%), Query Frame = 2
Query:   23 KKPTGRFSNGKNAADFIAEKVGLPSSPPYLAVKSNKNKASFLTGVSFASGGAGIFNSSDQSLAQSITLTKQVDYYGTVHKDLVQQMGPSAAQEHLSKSLFAIVVGSND-ISDYSGKSDLRKKSTPEQFVNLMAATLKGQLKRLYGYGARKFVCVXLGVIGCIPAQRIKSQ 529
            K PTGR S+G        EK  LPS PP L   +  N+  F  GVSFAS GAG    ++  L   I L  Q++ +  V K L  ++G +  +   S++++   +G+ND    +S  S   K ++ E+FV+ +   +   ++ +Y  G RKF  + +G   C P   I+ +
Sbjct:   71 KFPTGRLSDGP-------EKAWLPSIPPNLQPNNGNNQ--FTYGVSFASAGAGAL--AESFLGMVINLGTQLNNFKDVEKSLRSELGDAETKRVFSRAVYLFHIGANDYFYPFSANSSTFKSNSKEKFVDFVIGNITFVIEEVYKMGGRKFGFLNVGPYECSPNSLIRDR 229          
BLAST of CK937173 vs. ExPASy Swiss-Prot
Match: EXL6_ARATH (GDSL esterase/lipase EXL6 OS=Arabidopsis thaliana GN=EXL6 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.051e-14
Identity = 52/171 (30.41%), Postives = 83/171 (48.54%), Query Frame = 2
Query:    5 GIDFPTKKPTGRFSNGKNAADFIAEKVGLPSSPPYLAVKSNKNKASFLTGVSFASGGAGIFNSSDQSLAQSITLTKQVDYYGTVHKDLVQQMGPSAAQEHLSKSLFAIVVGSNDISDYSGKSDLRKKSTPEQFVNLMAATLKGQLKRLYGYGARKFVCVXLGVIGCIPAQR 517
            G+ F  K PTGRF NG+   D +AE + +    P  +     +     TGV FASGG+GI + + ++L       +  D+   + K           +E +S ++F I  G+ND+  +   + LR +ST   + + M    +  LK LY  GARKF  + +  +GC+P  R
Sbjct:   58 GLSFDYKFPTGRFGNGRVFTDIVAEGLQIKRLVPAYSKIRRISSEDLKTGVCFASGGSGIDDLTSRTLRVLSAGDQVKDFKDYLKKLRRVVKRKKKVKEIVSNAVFLISEGNNDLGYFVAPALLRLQST-TTYTSKMVVWTRKFLKDLYDLGARKFAVMGVMPVGCLPIHR 227          
BLAST of CK937173 vs. ExPASy Swiss-Prot
Match: GDL68_ARATH (GDSL esterase/lipase At4g30140 OS=Arabidopsis thaliana GN=At4g30140 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.348e-13
Identity = 54/172 (31.40%), Postives = 93/172 (54.07%), Query Frame = 2
Query:    5 GIDFPTKKPTGRFSNGKNAADFIAEKVGLPSS-PPYLAVKSNKNKASFLTGVSFASGGAGIFNSSDQSLAQSITLTKQVDYYGTVHKDLVQQMGPSAAQEHLSKSLFAIVVGSND-ISDY--SGKSDLRKKSTPEQFVNLMAATLKGQLKRLYGYGARKFVCVXLGVIGCIP 508
            GID+  + PTGRFSNG+N  D IAE  G  +  PP+    +  ++A    G+++ASG  GI   + +++ + I+L +QV+ + +    ++    P +    L + L+ I +GSND +++Y  S  +  R+   P+Q+   + +  +  L +LY  GAR      +G IGC P
Sbjct:   62 GIDY-FQGPTGRFSNGRNIPDVIAELAGFNNPIPPF----AGASQAQANIGLNYASGAGGIREETSENMGERISLRQQVNNHFSA---IITAAVPLS---RLRQCLYTINIGSNDYLNNYFLSPPTLARRLFNPDQYARSLISLYRIYLTQLYVLGARNVALFGIGKIGCTP 222          
BLAST of CK937173 vs. ExPASy Swiss-Prot
Match: GDL42_ARATH (GDSL esterase/lipase At2g30310 OS=Arabidopsis thaliana GN=At2g30310 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.348e-13
Identity = 54/173 (31.21%), Postives = 86/173 (49.71%), Query Frame = 2
Query:    5 GIDFPTKKPTGRFSNGKNAADFIAEKVGLPS-SPPYLAVKSNKNKASFLTGVSFASGGAGIFNSSDQSLAQSITLTKQVDYYGTVHKDLVQQMGPSAAQEHLSKSLFAIVVGSND--ISDYSGKSDLRKKSTPEQFVNLMAATLKGQLKRLYGYGARKFVCVXLGVIGCIPAQ 514
            G+D P  +  GR+SNGK  +D IA K+ +    PP+L  + N +    +TGVSFAS GAG  + S  S +++I +++Q   +      L   +G   A E ++ +L  I  G ND  ++ Y   +   +  T   +   +   L G ++ LY  G R  V   L  +GC+P Q
Sbjct:   64 GVDLPGHEANGRYSNGKVISDVIASKLNIKELVPPFL--QPNISHQDIVTGVSFASAGAGYDDRSSLS-SKAIPVSQQPSMFKNYIARLKGIVGDKKAMEIINNALVVISAGPNDFILNFYDIPTRRLEYPTIHGYQEFILKRLDGFVRELYSLGCRNIVVGGLPPMGCLPIQ 233          
BLAST of CK937173 vs. ExPASy Swiss-Prot
Match: GDL20_ARATH (GDSL esterase/lipase At1g54020 OS=Arabidopsis thaliana GN=At1g54020 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.003e-13
Identity = 53/164 (32.32%), Postives = 80/164 (48.78%), Query Frame = 2
Query:   29 PTGRFSNGKNAADFIAEKVGLPSS-PPYLAVKSNKNKASFLTGVSFASGGAGIFNSSDQSLAQSITLTKQVDYYGTVHKDLVQQMGPSAAQEHLSKSLFAIVVGSNDISDYSGKSDLRKKSTPEQFVNLMAATLKGQLKRLYGYGARKFVCVXLGVIGCIPAQR 517
            P G+FS+GK   DFIA+ +G+P   PP L   ++ ++     G SFA G A I  S   SLA    L +QV  +         QM  +   +++ KS+F I +G  D  +++  +   + S  + FV  +    K  +  LY  GA KFV   L  +GC+P  R
Sbjct:   69 PKGKFSDGKIVPDFIAKFMGIPHDLPPALKPGTDVSR-----GASFAVGSASILGSPKDSLA----LNQQVRKFN--------QMISNWKVDYIQKSVFMISIGMEDYYNFTKNNPNAEVSAQQAFVTSVTNRFKSDINLLYSSGASKFVVHLLAPLGCLPIAR 215          
BLAST of CK937173 vs. ExPASy Swiss-Prot
Match: GDL89_ARATH (GDSL esterase/lipase At5g63170 OS=Arabidopsis thaliana GN=At5g63170 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.922e-13
Identity = 55/171 (32.16%), Postives = 87/171 (50.88%), Query Frame = 2
Query:    5 GIDFPTKKPTGRFSNGKNAADFIAEKVGLPS-SPPYLAVKSNKNKASFLTGVSFASGGAGIFNSSDQSLAQSITLTKQVDYYGTVHKDLVQQMG-PSAAQEHLSKSLFAIVVGSNDISDYSGKSDLRK-KSTPEQFVNLMAATLKGQLKRLYGYGARKFVCVXLGVIGCIP 508
            G DF T++ TGRF NG+   D IAE +G+ +  P Y +     N    LTGVSFASGG+G+ +     +   I +  Q++ +      L    G     +  +S ++F I  G+NDI+     + +R  + T   + +LM +  +  +K LY  GARKF  +    +GC+P
Sbjct:   57 GRDFVTRRATGRFGNGRIPTDLIAEGLGIKNIVPAYRSPFLEPN--DILTGVSFASGGSGL-DPMTARIQGVIWVPDQLNDFKAYIAKLNSITGDEEKTRSIISNAVFVISAGNNDIAITYFTNPIRNTRYTIFSYTDLMVSWTQSFIKELYNLGARKFAIMGTLPLGCLP 224          
BLAST of CK937173 vs. ExPASy Swiss-Prot
Match: GDL24_ARATH (GDSL esterase/lipase At1g58480 OS=Arabidopsis thaliana GN=At1g58480 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.123e-13
Identity = 52/171 (30.41%), Postives = 82/171 (47.95%), Query Frame = 2
Query:    5 GIDFPTKKPTGRFSNGKNAADFIAEKVGLPSSPPYLAVKSNKNKASFLTGVSFASGGAGIFNSSDQSLAQSITLTKQVDYYGTVHKDLVQQMGPSAAQEHLSKSLFAIVVGSNDISDYSGKSDLRKKSTPEQFVNLMAATLKGQLKRLYGYGARKFVCVXLGVIGCIPAQR 517
            G D+P    TGRFS+G+  +D IAEK+GL  + P   + S       L GV+FAS G G ++     +   I++  Q+ Y+      + +  G   A++ L  S F +V  SND++        R   T   + N +A +    ++ L+  GARK        +GC+P QR
Sbjct:   59 GKDYPGGDATGRFSDGRVPSDLIAEKLGLAKTLP-AYMNSYLKPEDLLKGVTFASRGTG-YDPLTAKIMSVISVWDQLIYFKEYISKIKRHFGEEKAKDILEHSFFLVVSSSNDLAHTYLAQAHRYDRT--SYANFLADSAVHFVRELHKLGARKIGVFSAVPVGCVPLQR 225          
The following BLAST results are available for this feature:
BLAST of CK937173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
GDL1_CARPA1.440e-1533.53GDSL esterase/lipase OS=Carica papaya PE=1 SV=1[more]
GDL23_ARATH2.457e-1531.21GDSL esterase/lipase At1g58430 OS=Arabidopsis thal... [more]
APG2_ARATH9.336e-1532.76GDSL esterase/lipase APG OS=Arabidopsis thaliana G... [more]
GLIP3_ARATH1.592e-1431.18GDSL esterase/lipase 3 OS=Arabidopsis thaliana GN=... [more]
EXL6_ARATH6.051e-1430.41GDSL esterase/lipase EXL6 OS=Arabidopsis thaliana ... [more]
GDL68_ARATH1.348e-1331.40GDSL esterase/lipase At4g30140 OS=Arabidopsis thal... [more]
GDL42_ARATH1.348e-1331.21GDSL esterase/lipase At2g30310 OS=Arabidopsis thal... [more]
GDL20_ARATH3.003e-1332.32GDSL esterase/lipase At1g54020 OS=Arabidopsis thal... [more]
GDL89_ARATH3.922e-1332.16GDSL esterase/lipase At5g63170 OS=Arabidopsis thal... [more]
GDL24_ARATH5.123e-1330.41GDSL esterase/lipase At1g58480 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004513_E03 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IVF_E03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937173 ID=CK937173; Name=CK937173; organism=Citrus sinensis; type=EST; length=530bp
CAACGGAATCGATTTTCCGACGAAGAAACCCACCGGAAGGTTCAGTAACG
GAAAGAATGCTGCTGATTTTATTGCCGAGAAAGTGGGATTACCATCTTCA
CCACCATATCTTGCCGTCAAGTCAAACAAGAACAAGGCATCATTTCTAAC
TGGCGTTAGCTTTGCCTCTGGAGGTGCTGGAATCTTCAATAGCTCTGATC
AATCTCTTGCTCAATCAATTACTTTGACAAAACAAGTGGACTACTATGGT
ACTGTGCATAAAGATTTGGTGCAACAGATGGGACCCTCTGCTGCACAGGA
ACACTTGTCTAAATCTCTCTTTGCCATTGTGGTTGGAAGCAATGATATCT
CTGACTATTCTGGAAAGTCTGATCTTCGGAAGAAGAGCACGCCGGAGCAG
TTCGTCAATCTGATGGCTGCTACCCTCAAAGGACAGCTTAAGAGATTATA
TGGTTATGGTGCACGTAAATTTGTGTGTGTTNNNCTGGGGGTAATTGGAT
GTATTCCAGCACAAAGGATCAAGAGTCAAA
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