CK937172
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937172 vs. ExPASy Swiss-Prot
Match: TPSD3_ABIGR (Pinene synthase, chloroplastic OS=Abies grandis GN=ag3 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.378e-18 Identity = 69/242 (28.51%), Postives = 118/242 (48.76%), Query Frame = 3 Query: 9 VSASPAKVIQNAGKDSTRRSANYHPSIWGDHFLQYTCDTQETDDG--------SNVKHL--ELKKEIRRMLKADNKPSRTLQLIDAIQRLGVSYHFESEIDEILGKMHKASQDSDL-CDNEN--DELYYISLHFRLLRQNGYKISADVFKKFKDTDGNFKTS----LAKDVRGMLSLYEATHLGVHEEDILDEALAFTTSHLESIATHQIRSPLVEQVKHALVQPIHRGLQRLEARQYIPIY 683 +S S V+ + G RR ++H ++W D +Q E VK++ + E ++ N + L ++D+++RLG+ HF+ EI L ++ ++ + C E+ +L +L R LR +GY +S+DVFK FK +G F S +++RG+L+L+ A+ + E I+DEA F+T +L+ S L ++ L H L RLEAR YI ++ Sbjct: 49 ISMSSTTVVTDDGV--RRRMGDFHSNLWDDDVIQSLPTAYEEKSYLERAEKLIGEVKNMFNSMSLEDGELMSPLNDLIQRLWIVDSLERLGIHRHFKDEIKSALDYVYSYWGENGIGCGRESVVTDLNSTALGLRTLRLHGYPVSSDVFKAFKGQNGQFSCSENIQTDEEIRGVLNLFRASLIAFPGEKIMDEAEIFSTKYLKEALQKIPVSSLSREIGDVLEYGWHTYLPRLEARNYIQVF 288
BLAST of CK937172 vs. ExPASy Swiss-Prot
Match: TPSD4_ABIGR (Delta-selinene synthase OS=Abies grandis GN=ag4 PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.799e-18 Identity = 70/235 (29.79%), Postives = 116/235 (49.36%), Query Frame = 3 Query: 60 RRSANYHPSIWGDHFLQYTCDTQETDDGSNVKHLELKK---EIRRML-------KADNKPSRTLQLIDAIQRLGVSYHFESEIDEI-LGKMHKASQDSDLCDNEND----ELYYISLHFRLLRQNGYKISADVFKKFKDTDGNFKTSLA-------KDVRGMLSLYEATHLGVHEEDILDEALAFTTSHLESI-ATH----QIRSPLVEQVKHALVQPIHRGLQRLEARQYIPIY 683 RR+ N+H ++W D + + + G+ + L+K EI+ +L D+ + LQ++D ++ LG+ HFE EI L +++ + + + D +L +L FR LR + Y +S+ V K FKD +G F + K VR MLSL A+ + E +++EA AFT +L + A H + L+ +VK+AL P H + R EAR ++ IY Sbjct: 11 RRTGNHHGNVWDDDLIH----SLNSPYGAPAYYELLQKLIQEIKHLLLTEMEMDDGDHDLIKRLQIVDTLECLGIDRHFEHEIQTAALDYVYRWWNEKGIGEGSRDSFSKDLNATALGFRALRLHRYNVSSGVLKNFKDENGKFFCNFTGEEGRGDKQVRSMLSLLRASEISFPGEKVMEEAKAFTREYLNQVLAGHGDVTDVDQSLLREVKYALEFPWHCSVPRWEARSFLEIY 241
BLAST of CK937172 vs. ExPASy Swiss-Prot
Match: TPSD8_ABIGR (Beta-phellandrene synthase, chloroplastic OS=Abies grandis GN=ag8 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 8.929e-18 Identity = 58/225 (25.78%), Postives = 113/225 (50.22%), Query Frame = 3 Query: 60 RRSANYHPSIWGDHFLQYTCDTQETDDGSNVKHLELKKEIRRMLKAD-----------NKPSRTLQLIDAIQRLGVSYHFESEIDEILGKMHKASQDSDL-CDNEN--DELYYISLHFRLLRQNGYKISADVFKKFKDTDGNFKTSLA---KDVRGMLSLYEATHLGVHEEDILDEALAFTTSHLESIATHQIRSPLVEQVKHALVQPIHRGLQRLEARQYIPIY 683 RR +YH ++W D F+Q + T + + +L E++ M + N L ++D+++RLG+ HF+ EI L ++ + + C ++ ++ + FR LR +GY +S++V K F+D +G F S + +D+R +L+LY A+ + E +++EA F++ +L+ S L +++ + L H + RLE R Y+ ++ Sbjct: 62 RRIGDYHSNLWDDDFIQ-SLSTPYGEPSYRERAEKLIGEVKEMFNSMPSEDGESMSPLNDLIERLWMVDSVERLGIDRHFKKEIKSALDYVYSYWNEKGIGCGRDSVFPDVNSTASGFRTLRLHGYSVSSEVLKVFQDQNGQFAFSPSTKERDIRTVLNLYRASFIAFPGEKVMEEAEIFSSRYLKEAVQKIPVSSLSQEIDYTLEYGWHTNMPRLETRNYLDVF 285
BLAST of CK937172 vs. ExPASy Swiss-Prot
Match: TPSD1_ABIGR (Alpha-bisabolene synthase OS=Abies grandis GN=ag1 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 8.929e-18 Identity = 59/169 (34.91%), Postives = 91/169 (53.85%), Query Frame = 3 Query: 219 LQLIDAIQRLGVSYHFESEIDEILGKMHKASQDSDLCD---NENDELYYISLHFRLLRQNGYKISADVFKKFKDTDGNFKTSLA---KDVRGMLSLYEATHLGVHEEDILDEALAFTTSHL-------ESIATHQIRSPLVEQVKHALVQPIHRGLQRLEARQYIPIYQ 686 L ++D I RLG+ HFE EI E L +++ + + N +L +L FRLLR + Y +S +F FKD +G F S KDV ML+LY A+ L E+ILDEA +F T +L E+ + + L +++K+AL H + R+EA++Y +Y+ Sbjct: 302 LLIVDNIVRLGIYRHFEKEIKEALDYVYRHWNERGIGWGRLNPIADLETTALGFRLLRLHRYNVSPAIFDNFKDANGKFICSTGQFNKDVASMLNLYRASQLAFPGENILDEAKSFATKYLREALEKSETSSAWNNKQNLSQEIKYALKTSWHASVPRVEAKRYCQVYR 470
BLAST of CK937172 vs. ExPASy Swiss-Prot
Match: TPSD5_ABIGR (Gamma-humulene synthase OS=Abies grandis GN=ag5 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.989e-17 Identity = 70/252 (27.78%), Postives = 127/252 (50.40%), Query Frame = 3 Query: 12 SASPAKVIQNAGKDSTRRSANYHPSIWGDHFLQYTCDTQETDDGSNVKHLELKKEIRRMLKADNKPS---------RTLQLIDAIQRLGVSYHFESEIDEILGKMHKASQDSDLCDNEND----ELYYISLHFRLLRQNGYKISADVFKKFKDTDGNF----------KTSLAKDVRGMLSLYEATHLGVHEEDILDEALAFTTSHLESI-----ATHQIRSPLVEQVKHALVQPIHRGLQRLEARQYIPIY 683 S SP+ +++ T +N H ++W D +Q + ++ + +L +EI+ + +D S + L+++D ++ LG+ HF+ EI L +++ + + + D +L +L FR LR + Y +S+ V + F+D +G F + K VR MLSL A+++ E +++EA AFTT++L+ + ATH + L+ +VK+AL P H +QR EAR +I I+ Sbjct: 7 SVSPSTDLKSTESSIT---SNRHGNMWEDDRIQ-SLNSPYGAPAYQERSEKLIEEIKLLFLSDMDDSCNDSDRDLIKRLEIVDTVECLGIDRHFQPEIKLALDYVYRCWNERGIGEGSRDSLKKDLNATALGFRALRLHRYNVSSGVLENFRDDNGQFFCGSTVEEEGAEAYNKHVRCMLSLSRASNILFPGEKVMEEAKAFTTNYLKKVLAGREATH-VDESLLGEVKYALEFPWHCSVQRWEARSFIEIF 253
BLAST of CK937172 vs. ExPASy Swiss-Prot
Match: KSA_ARATH (Ent-copalyl diphosphate synthase, chloroplastic OS=Arabidopsis thaliana GN=GA1 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.289e-16 Identity = 59/166 (35.54%), Postives = 90/166 (54.22%), Query Frame = 3 Query: 225 LIDAIQRLGVSYHFESEIDEILGKMHKASQDSDLC---DNENDELYYISLHFRLLRQNGYKISADVFKKFKDTDGNFKTSLAKD---VRGMLSLYEATHLGVHEEDILDEALAFTTSHL-------ESIATHQIRSPLVEQVKHALVQPIHRGLQRLEARQYIPIY 683 ++D +QRLG+S +FE EI E L +H+ D+ +C + ++ ++ FRLLRQ+GY++SADVFK F + +G F + + V GM +LY A+ L E+IL A F+ ++L E I I L ++ AL P + L R+E R YI Y Sbjct: 334 IVDRLQRLGISRYFEEEIKECLDYVHRYWTDNGICWARCSHVQDIDDTAMAFRLLRQHGYQVSADVFKNF-EKEGEFFCFVGQSNQAVTGMFNLYRASQLAFPREEILKNAKEFSYNYLLEKREREELIDKWIIMKDLPGEIGFALEIPWYASLPRVETRFYIDQY 498
BLAST of CK937172 vs. ExPASy Swiss-Prot
Match: TASY_TAXBR (Taxadiene synthase OS=Taxus brevifolia GN=TDC1 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.862e-15 Identity = 51/163 (31.29%), Postives = 90/163 (55.21%), Query Frame = 3 Query: 219 LQLIDAIQRLGVSYHFESEIDEILGKMHKASQDSDLC---DNENDELYYISLHFRLLRQNGYKISADVFKKFKDTDGNFKTSLAK---DVRGMLSLYEATHLGVHEEDILDEALAFTTSHL-ESIATH-QIRSPLVEQVKHALVQPIHRGLQRLEARQYIPIY 683 L L+D I+ LG+ HF+ EI L +++ + + D+ +L +L R LR +GY +S+DV FKD +G F +S + ++R +++L+ A+ L +E +D+A F +L E++AT + L +++++ + P H + RLEAR YI Y Sbjct: 356 LSLVDNIEHLGIGRHFKQEIKGALDYVYRHWSERGIGWGRDSLVPDLNTTALGLRTLRMHGYNVSSDVLNNFKDENGRFFSSAGQTHVELRSVVNLFRASDLAFPDERAMDDARKFAEPYLREALATKISTNTKLFKEIEYVVEYPWHMSIPRLEARSYIDSY 518
BLAST of CK937172 vs. ExPASy Swiss-Prot
Match: TASY_TAXBA (Taxadiene synthase OS=Taxus baccata GN=TDC1 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.417e-15 Identity = 50/163 (30.67%), Postives = 90/163 (55.21%), Query Frame = 3 Query: 219 LQLIDAIQRLGVSYHFESEIDEILGKMHKASQDSDLC---DNENDELYYISLHFRLLRQNGYKISADVFKKFKDTDGNFKTSLAK---DVRGMLSLYEATHLGVHEEDILDEALAFTTSHL-ESIATH-QIRSPLVEQVKHALVQPIHRGLQRLEARQYIPIY 683 L L+D I+ LG+ HF+ EI L +++ + + D+ +L +L R LR +GY +S+DV FKD +G F +S + ++R +++L+ A+ L +E +D+A F +L +++AT + L +++++ + P H + RLEAR YI Y Sbjct: 356 LSLVDNIEHLGIGRHFKQEIKVALDYVYRHWSERGIGWGRDSLVPDLNTTALGLRTLRTHGYDVSSDVLNNFKDENGRFFSSAGQTHVELRSVVNLFRASDLAFPDEGAMDDARKFAEPYLRDALATKISTNTKLYKEIEYVVEYPWHMSIPRLEARSYIDSY 518
BLAST of CK937172 vs. ExPASy Swiss-Prot
Match: TPSD1_PINTA (Levopimaradiene synthase, chloroplastic OS=Pinus taeda GN=LPS PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.075e-15 Identity = 50/168 (29.76%), Postives = 88/168 (52.38%), Query Frame = 3 Query: 219 LQLIDAIQRLGVSYHFESEIDEILGKMHKASQDSDLC---DNENDELYYISLHFRLLRQNGYKISADVFKKFKDTDGNFKTSLAKDVRG---MLSLYEATHLGVHEEDILDEALAFTTSHLESIATH-------QIRSPLVEQVKHALVQPIHRGLQRLEARQYIPIY 683 L +D ++RLG+ +HF+ EI + L ++ + + +N ++ ++ R+LR +GY +S+DV K F+D +G F L + RG ML++ +H+ E I++EA T +L + ++ + +V++AL P HR + RLEAR YI Y Sbjct: 338 LWAVDTVERLGIDHHFKEEIKDALDYVYSHWDERGIGWARENPVPDIDDTAMGLRILRLHGYNVSSDVLKTFRDENGEFFCFLGQTQRGVTDMLNVNRCSHVAFPGETIMEEAKLCTERYLRNALEDGGASDKWALKKNIRGEVEYALKYPWHRSMPRLEARSYIENY 505
BLAST of CK937172 vs. ExPASy Swiss-Prot
Match: TPSD2_PICAB (Isopimaradiene synthase, chloroplastic OS=Picea abies GN=TPS-ISO PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.207e-14 Identity = 50/168 (29.76%), Postives = 87/168 (51.79%), Query Frame = 3 Query: 219 LQLIDAIQRLGVSYHFESEIDEILGKMHKASQDSDLC---DNENDELYYISLHFRLLRQNGYKISADVFKKFKDTDGNFKTSLAKDVRG---MLSLYEATHLGVHEEDILDEALAFTTSHLESIATH-------QIRSPLVEQVKHALVQPIHRGLQRLEARQYIPIY 683 L +D ++RLG+ +HF+ EI + L ++ + + +N ++ ++ R+LR +GY +S+DV K F+D +G F L + RG ML++ +H+ E I+ EA T +L + ++ + +V++AL P HR + RLEAR YI Y Sbjct: 355 LWAVDTVERLGIDHHFKEEIKDALDYVYSHWDERGIGWARENPIPDIDDTAMGLRILRLHGYNVSSDVLKTFRDENGEFFCFLGQTQRGVTDMLNVNRCSHVAFPGETIMQEAKLCTERYLRNALEDVGAFDKWALKKNIRGEVEYALKYPWHRSMPRLEARSYIEHY 522 The following BLAST results are available for this feature:
BLAST of CK937172 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937172 ID=CK937172; Name=CK937172; organism=Citrus sinensis; type=EST; length=687bpback to top |