CK937163

Overview
NameCK937163
Unique NameCK937163
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length734
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937163 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.820e-20
Identity = 61/161 (37.89%), Postives = 91/161 (56.52%), Query Frame = 2
Query:  242 RALIAEFVATLLFLYVSVATVIGHKKQSD--ACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPV 715
            +A +AEF+ATLLF++  V + I + K +   A    GL+ +A A    +FV V   A ISGGH+NPAVT GL +   ++++    Y +AQ LG+     L    +K+  N L    + VA+G N    +  EII TF LVYTV+ +A DPK+ +  +  P+
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLL----LKYVTNGLAVPTHGVAAGLNGLQGVVMEIIITFALVYTVYATAADPKKGSLGTIAPI 175          
BLAST of CK937163 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.296e-20
Identity = 59/167 (35.33%), Postives = 95/167 (56.89%), Query Frame = 2
Query:  242 RALIAEFVATLLFLYVSVATVIGHKKQSD--ACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPI 733
            +A +AEF++T +F++    + I + K ++  A    GL+  + A    +FV V   A ISGGH+NPAVTFG F+   ++L+R + Y++AQ LG+I    L+         + G     ++ G   G AL  EI+ TF LVYTV+ +A DPK+     ++ ++AP+ I
Sbjct:   21 KAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIVYIIAQLLGSIVASALLVFVTASSVPAFG-----LSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKK----GNIGIIAPIAI 178          
BLAST of CK937163 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.832e-19
Identity = 61/164 (37.20%), Postives = 91/164 (55.49%), Query Frame = 2
Query:  233 SFYRALIAEFVATLLFLYVSVATVIGHKKQSD--ACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPV 715
            S  +A ++EF+ATLLF++  V + +   K +   A    GL+ IA A    +FV V   A ISGGH+NPAVT GL +   ++LI    Y +AQCLG+I    L+  F+    N      + V++G      +  EI+ TF LVYTV+ +A DPK+ +  +  P+
Sbjct:   16 SSLKAYLSEFIATLLFVFAGVGSAVAFAKLTSDGALDPAGLVAIAIAHAFALFVGVSIAANISGGHLNPAVTLGLAIGGNITLITGFFYWIAQCLGSIVAC-LLLVFVT---NGKSVPTHGVSAGLGAVEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPI 175          
BLAST of CK937163 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.832e-19
Identity = 61/161 (37.89%), Postives = 90/161 (55.90%), Query Frame = 2
Query:  242 RALIAEFVATLLFLYVSVATVIGHKKQSDAC--GGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPV 715
            +A +AEF++TL+F++  V + I + K +        GL+ +A   G  +FV V   A ISGGH+NPAVTFGL L  +++++  V Y +AQ LGAI G  LV+        + G       SG      +  EII TF LVYTV+ +A DPK+ +  +  P+
Sbjct:   20 KAYVAEFISTLVFVFAGVGSAIAYTKLTGGAPLDPAGLVAVAVCHGFGLFVAVAIGANISGGHVNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCTGVATPTHG------LSGVGAFEGVVMEIIVTFGLVYTVYATAADPKKGSLGTIAPI 174          
BLAST of CK937163 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.124e-19
Identity = 57/155 (36.77%), Postives = 89/155 (57.42%), Query Frame = 2
Query:  233 SFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG-GANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSA 694
            +F +A+ AEF+ATL+F++  +A+ +             +L IA AFG  I  L      +SGGHINPA+T  L +  ++SL+RAV Y+VAQ +GAI G G++        N+ G    N++ +    G A+  E+I TF L   +FS+TD +R++
Sbjct:    9 AFLKAVFAEFLATLIFVFFGLASALKWPSALPT-----ILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAVFYVVAQLVGAIAGAGILYGLAPG--NARGNLAVNSLNNNTTPGQAVVVEMILTFQLALCIFSSTDSRRTS 156          
BLAST of CK937163 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 9.091e-19
Identity = 61/162 (37.65%), Postives = 92/162 (56.79%), Query Frame = 2
Query:  242 RALIAEFVATLLFLYVSVATVIGHKK--QSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANT-VASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPV 715
            +A +AEF+ATLLF++  V + I + +  +  A    GL+ IA A    +FV V   A ISGGH+NPAVTFGL +   ++++  + Y VAQ LGA     L+      +Y + G    T   SG ++   +  EI+ TF LVYTV+ +A DPK+ +  +  P+
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYSQLTKGGALDPAGLVAIAIAHAFALFVGVSMAANISGGHLNPAVTFGLAVGGHITILTGILYWVAQLLGASVACFLL------QYVTHGQAIPTHGVSGISEIEGVVMEIVITFALVYTVYATAADPKKGSLGTIAPM 174          
BLAST of CK937163 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 9.091e-19
Identity = 59/161 (36.65%), Postives = 90/161 (55.90%), Query Frame = 2
Query:  242 RALIAEFVATLLFLYVSVATVIGHKKQSD--ACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPV 715
            +A ++EF+ATLLF++  V + +   K +   A    GL+ +A A    +FV V   A ISGGH+NPAVT GL +   +++I    Y +AQCLG+I    L+  F+    N      + VA+G      +  EI+ TF LVYTV+ +A DPK+ +  +  P+
Sbjct:   19 KAYLSEFIATLLFVFAGVGSALAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITVITGFFYWIAQCLGSIVAC-LLLVFVT---NGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPI 175          
BLAST of CK937163 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.091e-19
Identity = 63/162 (38.89%), Postives = 91/162 (56.17%), Query Frame = 2
Query:  242 RALIAEFVATLLFLYVSVATVI--GHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVA-SGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPV 715
            +A +AEF+ATLLF++  V + I  G      A    GL+ IA A    +FV V   A ISGGH+NPAVTFGL +   ++++  V Y VAQ LGA     L+  F+ H     G    T A +G ++   +  E++ TF LVYTV+ +A DPK+ +  +  P+
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGVFYWVAQLLGATVAC-LLLGFVTH-----GKAIPTHAVAGISELEGVVFEVVITFALVYTVYATAADPKKGSLGTIAPI 174          
BLAST of CK937163 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 9.091e-19
Identity = 62/165 (37.58%), Postives = 91/165 (55.15%), Query Frame = 2
Query:  242 RALIAEFVATLLFLYVSVATVIGHKKQSD--ACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKG----SALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPV 715
            RA +AEF++TL+F++    + I   K +D  A    GL+  A A    +FV V   A ISGGH+NPAVTFG+ L   ++L+R + Y +AQ LG++    L+        +   GG    A G + G    +AL  EI+ TF LVYTV+ +A DPK  +  +  P+
Sbjct:   22 RAALAEFISTLIFVFAGSGSGIAFNKITDNGATTPSGLVAAALAHAFGLFVAVSVGANISGGHVNPAVTFGVLLGGNITLLRGILYWIAQLLGSVAACFLL--------SFATGGEPIPAFGLSAGVGSLNALVFEIVMTFGLVYTVYATAVDPKNGSLGTIAPI 178          
BLAST of CK937163 vs. ExPASy Swiss-Prot
Match: AQP5_RAT (Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.091e-19
Identity = 54/155 (34.84%), Postives = 88/155 (56.77%), Query Frame = 2
Query:  233 SFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG-GANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSA 694
            +F++A+ AEF+ATL+F++  + + +             +L I+ AFG  I  L      +SGGHINPA+T  L +  ++SL+RAV Y+ AQ +GAI G G++  +     N+ G    N + +    G A+  E+I TF L   +FS+TD +R++
Sbjct:    9 AFFKAVFAEFLATLIFVFFGLGSALKWPSALPT-----ILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAVFYVAAQLVGAIAGAGIL--YWLAPLNARGNLAVNALNNNTTPGKAMVVELILTFQLALCIFSSTDSRRTS 156          
The following BLAST results are available for this feature:
BLAST of CK937163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
TIP1_TOBAC4.820e-2037.89Probable aquaporin TIP-type RB7-5A OS=Nicotiana ta... [more]
TIP1_MEDTR6.296e-2035.33Probable aquaporin TIP-type OS=Medicago truncatula... [more]
TIP23_ARATH1.832e-1937.20Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3... [more]
TIP22_ORYSJ1.832e-1937.89Probable aquaporin TIP2-2 OS=Oryza sativa subsp. j... [more]
AQP5_PIG3.124e-1936.77Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]
TIP23_MAIZE9.091e-1937.65Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2[more]
TIP22_ARATH9.091e-1936.65Probable aquaporin TIP2-2 OS=Arabidopsis thaliana ... [more]
TIP21_MAIZE9.091e-1938.89Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1[more]
TIP12_ARATH9.091e-1937.58Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2... [more]
AQP5_RAT9.091e-1934.84Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004513_D05 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IVF_D05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937163 ID=CK937163; Name=CK937163; organism=Citrus sinensis; type=EST; length=734bp
GGGGACAGACGCTAGCTTTTCTCGAGACCAGAGAGGCTGTGTGCTTTTCT
TTGATTGTTCCAAAGAGAAATCAAAATCTTGTGAAGAAGAAGAAGAAGAA
GAAGAAGAAGAAGAAAGAAAGATGTCAAAGGAAGTGAATGAAGAAGGACA
AACTCACCGCCATCACCATGGCAAGGACTACGTGGACCCACCACCAGCAC
CACTCATTGACATGGCTGAGCTCAAGCTCTGGTCCTTTTACAGAGCTCTC
ATAGCCGAGTTCGTGGCCACTCTCCTCTTCCTCTACGTCAGTGTTGCCAC
TGTCATTGGCCACAAGAAACAAAGTGATGCCTGTGGGGGTGTTGGCCTTT
TGGGTATTGCATGGGCCTTTGGTGGCATGATCTTCGTCCTTGTTTACTGC
ACCGCTGGCATTTCTGGTGGTCACATTAACCCTGCTGTGACGTTTGGGCT
GTTCTTGGCAAGGAAGGTATCATTGATCAGGGCTGTGGCTTACATGGTGG
CTCAGTGCTTGGGTGCCATTTGCGGTGTTGGTTTGGTCAAGGCCTTCATG
AAGCATGAGTACAACTCACTTGGTGGTGGTGCTAACACTGTGGCTTCTGG
CTACAACAAAGGATCAGCCTTGGGTGCTGAGATTATTGGTACCTTCGTGC
TTGTTTACACAGTCTTCTCGGCCACAGACCCCAAGAGAAGCGCTCGTGAC
TCTCACGTGCCCGTTTTGGCTCCACTTCCAATTG
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