CK937154

Overview
NameCK937154
Unique NameCK937154
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length605
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937154 vs. ExPASy Swiss-Prot
Match: HITA_NEIGO (Protein hitA OS=Neisseria gonorrhoeae GN=hitA PE=4 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 8.043e-22
Identity = 48/102 (47.06%), Postives = 68/102 (66.67%), Query Frame = 3
Query:   42 IFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLG 347
            IF KI  KEIP++ VYED +++ F+DI P AP H+L+IPKV      L+ A   H  +LG+++     +AK  GL DGF+ +IN G  GGQ VFH+H+H++G
Sbjct:    5 IFCKIAAKEIPAQTVYEDGEMVCFKDINPAAPLHLLLIPKVH--FDSLAHAAPEHQPLLGKMMLKVPEIAKASGLTDGFKTLINTGKGGGQEVFHLHIHIMG 104          
BLAST of CK937154 vs. ExPASy Swiss-Prot
Match: YHIT_BUCBP (Uncharacterized HIT-like protein bbp_327 OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=bbp_327 PE=4 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.861e-19
Identity = 45/108 (41.67%), Postives = 74/108 (68.52%), Query Frame = 3
Query:   42 IFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLE-DGFRIVINDGPNGGQSVFHIHVHLLGGRQMN 362
            IF KII   IPSK++Y+D ++ AF DI P AP HIL++P +   +  L++  E +  ILG +LY +  +AK+  ++ +G+R++IN   +G Q + H+H+HLLGG+++N
Sbjct:    5 IFQKIIKGIIPSKIIYQDKEITAFHDINPIAPIHILVVPNLL--IKSLNEINENNKHILGNMLYISIKIAKKFKIDKNGYRLIINCNQHGRQEIQHLHLHLLGGKKLN 110          
BLAST of CK937154 vs. ExPASy Swiss-Prot
Match: YHIT_BUCAI (Uncharacterized HIT-like protein BU357 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=BU357 PE=4 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.131e-18
Identity = 43/108 (39.81%), Postives = 74/108 (68.52%), Query Frame = 3
Query:   39 TIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGL-EDGFRIVINDGPNGGQSVFHIHVHLLGGRQM 359
            +IF  II ++IP+ +VY+D K+ AF DI+P+AP HILIIP     ++  +   +++  I+  + Y A  +AKQ+ + ++G+RI+IN    GGQ + ++H+HLLGG+++
Sbjct:    5 SIFKNIIQRKIPANIVYQDKKITAFEDIKPKAPVHILIIPNF--FISSSNDINKKNKWIMSHMFYIAVKIAKQKKINQEGYRIIINCNEYGGQEINYLHMHLLGGKKL 110          
BLAST of CK937154 vs. ExPASy Swiss-Prot
Match: YHIT_BUCAP (Uncharacterized HIT-like protein BUsg_345 OS=Buchnera aphidicola subsp. Schizaphis graminum GN=BUsg_345 PE=4 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.202e-17
Identity = 43/107 (40.19%), Postives = 70/107 (65.42%), Query Frame = 3
Query:   42 IFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGL-EDGFRIVINDGPNGGQSVFHIHVHLLGGRQM 359
            IF KII +E  + ++Y+D  V AF DI P+AP HI++IP +   +  L+   +++  I   +LY A  +AK + + EDG++IV+N   NGGQ + ++H+HLLGG ++
Sbjct:    7 IFQKIIKRETSTHIIYQDKIVTAFEDIAPKAPIHIIVIPNI--FIKTLNDINQKNKNIFAHMLYIAVKIAKNKKISEDGYKIVMNCNKNGGQEINYLHMHLLGGEKL 111          
BLAST of CK937154 vs. ExPASy Swiss-Prot
Match: Y664_CHLMU (Uncharacterized HIT-like protein TC_0664 OS=Chlamydia muridarum GN=TC_0664 PE=4 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.050e-17
Identity = 44/104 (42.31%), Postives = 65/104 (62.50%), Query Frame = 3
Query:   39 TIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGG 350
            TIF++II   +    V+ED+  +  +D  PQAP H+LIIPK    +  L   +     +L       +L+A+  G+E+G+R+VIN+G  GGQSVFH+H+HLLGG
Sbjct:   18 TIFERIIEGAVECDKVFEDENFIVIKDKFPQAPVHLLIIPKKH--IEKLQDMQSDDFSLLSEAGKIIQLMARDFGIENGYRVVINNGLEGGQSVFHLHIHLLGG 119          
BLAST of CK937154 vs. ExPASy Swiss-Prot
Match: YHIT_CHLTR (Uncharacterized HIT-like protein CT_385 OS=Chlamydia trachomatis GN=CT_385 PE=4 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.017e-16
Identity = 43/104 (41.35%), Postives = 65/104 (62.50%), Query Frame = 3
Query:   39 TIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGG 350
            TIF++II   +    V+ED+  +  +D  PQAP H+LIIPK    +  L   +     +L       +L+A+  G+E+G+R+V+N+G  GGQSVFH+H+HLLGG
Sbjct:    3 TIFERIIEGAVECDKVFEDENFIVIKDKFPQAPVHLLIIPKKH--IEKLQDIQGDDFLLLAEAGKIIQLMARNFGIENGYRVVVNNGLEGGQSVFHLHIHLLGG 104          
BLAST of CK937154 vs. ExPASy Swiss-Prot
Match: YHIT_RICPR (Uncharacterized HIT-like protein RP317 OS=Rickettsia prowazekii GN=RP317 PE=4 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.960e-16
Identity = 41/109 (37.61%), Postives = 69/109 (63.30%), Query Frame = 3
Query:   42 IFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVK--DGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLED-GFRIVINDGPNGGQSVFHIHVHLLGGRQM 359
            +F KII K +P++++YED ++LAF+DI P AP HI++IPK +  D    +SKA     + +         +A + GL+  G+R++ N G   GQ++FH H H++GG+++
Sbjct:    7 VFAKIITKNLPAEIIYEDKQILAFKDIAPIAPVHIIVIPKNEYIDYTDFISKAS---IDEIKHFFSKIADIANEAGLDKVGYRLITNKGEKSGQTIFHFHFHIIGGKKL 112          
BLAST of CK937154 vs. ExPASy Swiss-Prot
Match: YHIT_CHLPN (HIT-like protein CPn_0488/CP_0266/CPj0488/CpB0508 OS=Chlamydia pneumoniae GN=CPn_0488 PE=4 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.919e-15
Identity = 43/110 (39.09%), Postives = 70/110 (63.64%), Query Frame = 3
Query:   39 TIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLV---AKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQM 359
            T+F +II+  I  + V+E++  +A +D  PQAP H+LIIPK       + + ++   + +  +    K+V   A + G+ DG+R+VIN+G  GGQ+VFH+H+HLLGGR +
Sbjct:    2 TVFKQIIDGLIDCEKVFENENFIAIKDRFPQAPVHLLIIPKKP-----IPRFQDIPGDEMILMAEAGKIVQELAAEFGIADGYRVVINNGAEGGQAVFHLHIHLLGGRPL 106          
BLAST of CK937154 vs. ExPASy Swiss-Prot
Match: YHIT_AZOBR (Uncharacterized 13.2 kDa HIT-like protein in hisE 3'region OS=Azospirillum brasilense PE=4 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.619e-14
Identity = 42/110 (38.18%), Postives = 57/110 (51.82%), Query Frame = 3
Query:   30 DSPTIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQM 359
            D   +F +I+  EIP K V E +  LAF DI PQAPTHIL+IPK          A     EI G      ++       E G+RI+ N G +  Q V H+H+H+  GR++
Sbjct:    6 DPNNVFARILRGEIPCKKVLETEHALAFHDINPQAPTHILVIPKGAYVDMDDFSARATEAEIAGLFRAVGEVARGAGAAEPGYRILSNCGEDANQEVPHLHIHVFAGRRL 115          
BLAST of CK937154 vs. ExPASy Swiss-Prot
Match: Y866_METJA (Uncharacterized HIT-like protein MJ0866 OS=Methanocaldococcus jannaschii GN=MJ0866 PE=4 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.164e-12
Identity = 44/110 (40.00%), Postives = 59/110 (53.64%), Query Frame = 3
Query:   42 IFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPK---------VKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLL 344
            IF KIIN EIP+KVVYED+ VLAF DI P+   H L++PK           D L    K  ++  E+L +L +            DG+ IV N+G   GQ V H+H H++
Sbjct:    3 IFCKIINGEIPAKVVYEDEHVLAFLDINPRNKGHTLVVPKKHYERFDEMPDDELCNFIKGVKKTVEVLKKLGF------------DGYNIVNNNGRVAGQEVNHVHFHII 100          
The following BLAST results are available for this feature:
BLAST of CK937154 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
HITA_NEIGO8.043e-2247.06Protein hitA OS=Neisseria gonorrhoeae GN=hitA PE=4... [more]
YHIT_BUCBP2.861e-1941.67Uncharacterized HIT-like protein bbp_327 OS=Buchne... [more]
YHIT_BUCAI4.131e-1839.81Uncharacterized HIT-like protein BU357 OS=Buchnera... [more]
YHIT_BUCAP1.202e-1740.19Uncharacterized HIT-like protein BUsg_345 OS=Buchn... [more]
Y664_CHLMU2.050e-1742.31Uncharacterized HIT-like protein TC_0664 OS=Chlamy... [more]
YHIT_CHLTR1.017e-1641.35Uncharacterized HIT-like protein CT_385 OS=Chlamyd... [more]
YHIT_RICPR2.960e-1637.61Uncharacterized HIT-like protein RP317 OS=Ricketts... [more]
YHIT_CHLPN1.919e-1539.09HIT-like protein CPn_0488/CP_0266/CPj0488/CpB0508 ... [more]
YHIT_AZOBR3.619e-1438.18Uncharacterized 13.2 kDa HIT-like protein in hisE ... [more]
Y866_METJA1.164e-1240.00Uncharacterized HIT-like protein MJ0866 OS=Methano... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004513_E08 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IVF_E08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937154 ID=CK937154; Name=CK937154; organism=Citrus sinensis; type=EST; length=605bp
AAGAGGCTGCTGCTGCCGCCGTTCCTTCTGATTCGCCCACCATATTTGAC
AAAATAATTAACAAAGAAATCCCATCTAAAGTTGTTTATGAGGATGATAA
GGTCTTAGCCTTTAGGGACATAGAGCCCCAAGCTCCTACACACATTCTAA
TTATTCCCAAAGTGAAGGATGGCTTGACTGGACTTTCAAAGGCTGAGGAA
AGGCATTGCGAAATTCTTGGCCGCCTTCTTTACACTGCTAAGCTTGTTGC
TAAACAGGAAGGACTAGAAGACGGCTTTAGGATTGTGATTAATGATGGGC
CAAATGGAGGTCAATCAGTTTTTCACATCCACGTCCACCTCCTAGGAGGA
CGACAAATGAACTGGCCCCCGGGCTAAGATGAAGTATTTTGGGTGCCAGA
TTCTCTTATGAAAAAATGATTACGCCCTTTGTACTTTAATATGTATCAAG
CTTCAAATAACAAATTACTTGGTGGTTGCTCTGAACCACATTATTTGATA
TGATGTGAAATGACATTGTGCTGGAAGGAGAAAAAGACCTTCAATAATAA
GGGTGTGGTTTGTCGAATTTCTGCATAATTTTCTTTTAAAAAAAAAAAAA
AAAAA
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