EY665855

Overview
NameEY665855
Unique NameEY665855
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665855 vs. ExPASy Swiss-Prot
Match: CSLB5_ARATH (Cellulose synthase-like protein B5 OS=Arabidopsis thaliana GN=CSLB5 PE=2 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 1.400e-22
Identity = 58/181 (32.04%), Postives = 97/181 (53.59%), Query Frame = 2
Query:    2 KEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAI--EKW-----GLENEGISRSRDHPSVVEVIGXXXXXXXXXXXXXXXKMPLLVYVAREKRPSHPHNFKAGALNVLV 523
            +E  +  +NTVLS +A++YP  KL  Y+SDDG + +T   ++EA KF + W PFCK++ ++   P  YF +P     DS    F  + + +K +Y +   +V  A     W       E    ++  DH ++V+V+                ++P LVY++REKRP++ H++K GA+N L+
Sbjct:  106 RESPIITVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFVKIWAPFCKKYNVRVRAPFRYFLNPLVATDDS---VFSKDWKMMKREYVKLCRKVEDATGDSHWLDADDDFEAFSNTKPNDHSTIVKVV-----WENKGGVGDEKEVPHLVYISREKRPNYLHHYKTGAMNFLL 278          

HSP 2 Score: 26.1794 bits (56), Expect = 1.400e-22
Identity = 12/24 (50.00%), Postives = 16/24 (66.67%), Query Frame = 3
Query:  618 RVSGGMSNSPYILMLDWGMVLHGP 689
            RVSG M+N+PY L +D  M  + P
Sbjct:  279 RVSGLMTNAPYTLNVDCDMYANEP 302          
BLAST of EY665855 vs. ExPASy Swiss-Prot
Match: CSLB6_ARATH (Cellulose synthase-like protein B6 OS=Arabidopsis thaliana GN=CSLB6 PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.788e-22
Identity = 62/195 (31.79%), Postives = 106/195 (54.36%), Query Frame = 2
Query:    2 KEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAI--EKW-----GLENEGISRSRDHPSVVEVIGXXXXXXXXXXXXXXXKMPLLVYVAREKRPSHPHNFKAGALNVLV*SSLIIHTHTHMVH 565
            +EP + V+NTVLS +A++YP  KL  Y+SDDG + +T   ++EA KF + W PFCK++ ++   P  YF +P     DS    F  + + +K +Y +   +V  A     W       E    ++  DH ++V+V+                ++P LVY++REKRP++ H++K GA+N L+  S ++    +M++
Sbjct:  106 REPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFVKIWAPFCKKYNVRVRAPFRYFLNPLVATDDS---VFSKDWKMMKREYVKLCRKVEDATGDSHWLDADDDFEAFSNTKPNDHSTIVKVV-----WENKGGVGDEKEVPHLVYISREKRPNYLHHYKTGAMNFLLRVSGLMTNAPYMLN 292          
BLAST of EY665855 vs. ExPASy Swiss-Prot
Match: CSLB1_ARATH (Cellulose synthase-like protein B1 OS=Arabidopsis thaliana GN=CSLB1 PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 3.051e-22
Identity = 76/254 (29.92%), Postives = 126/254 (49.61%), Query Frame = 2
Query:    2 KEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAIEKWGL-----ENEGISRSR--DHPSVVEVIGXXXXXXXXXXXXXXXKMPLLVYVAREKRPSHPHNFKAGALNVLV*SS-------LIIHTHTHMVHN------LIACICLIE-------AVVDVVASGFRGNEQLSLYIDARLGHGIA 682
            +EP + V++TVLS +A++YP  KL  Y+SDDG + +T   ++EA KFA+ W+PFCK++  +   P  YF  P +   +  + EF  + EK K +Y + + +V  A     +     + E  S ++  DH ++V+V+                ++P ++Y++REKRP++ HN K GA+N L   S        I++    M  N         CI L E       A V      +  + +L + + + LG GIA
Sbjct:  106 REPPIMVVDTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNTRVRAPSRYFLKPISVATE--DYEFNRDWEKTKREYEKLRRKVEDATGDSHMLDVEDDFEAFSNTKPNDHSTLVKVV-----WENKGGVGDEKEIPHIIYISREKRPNYVHNQKCGAMNFLARVSGLMTNAPYILNVDCDMYANDADVVRQAMCILLQESLNMKHCAFVQFRQEFYDSSTELIVVLQSHLGRGIA 352          
BLAST of EY665855 vs. ExPASy Swiss-Prot
Match: CSLD4_ORYSJ (Cellulose synthase-like protein D4 OS=Oryza sativa subsp. japonica GN=CSLD4 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.796e-22
Identity = 48/102 (47.06%), Postives = 66/102 (64.71%), Query Frame = 2
Query:    2 KEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERV 307
            KEP +   NT+LS +A DYP EKL  YLSDDGGA ++   + E   FAR+W+PFC++ G++  CPEAYF    +   +    +F+ ER K+K +Y EFK RV
Sbjct:  422 KEPPLVTANTILSILAADYPVEKLACYLSDDGGALLSFEALAETASFARTWVPFCRKHGVEPRCPEAYFGQKRDFLKNKVRVDFVRERRKVKREYDEFKVRV 523          
BLAST of EY665855 vs. ExPASy Swiss-Prot
Match: CSLF6_ORYSJ (Probable mixed-linked glucan synthase 6 OS=Oryza sativa subsp. japonica GN=CSLF6 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.674e-20
Identity = 67/223 (30.04%), Postives = 99/223 (44.39%), Query Frame = 2
Query:    2 KEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERVT------------------------RAI--------EKWGLENEGISRSRDHPSVVEVI-----------GXXXXXXXXXXXXXXXKMPLLVYVAREKRPSHPHNFKAGALNVLV*SSLII 541
            KEP +   N++LS +A DYP ++   YLSDD G  +T   M EA KFA  W+PFC++  I+   PE+YF    +        EF+ +R +++++Y +FK R+                         RA         E   +E     R  DH  +V V+                           ++P+LVYVAREKRP   H  KAGA+N L  +S ++
Sbjct:  197 KEPILSTANSILSILAADYPVDRNTCYLSDDSGMLLTYEAMAEAAKFATLWVPFCRKHAIEPRGPESYFELKSHPYMGRAQEEFVNDRRRVRKEYDDFKARINGLEHDIKQRSDSYNAAAGVKDGEPRATWMADGSQWEGTWIEQSENHRKGDHAGIVLVLLNHPSHARQLGPPASADNPLDFSGVDVRLPMLVYVAREKRPGCNHQKKAGAMNALTRASAVL 419          
BLAST of EY665855 vs. ExPASy Swiss-Prot
Match: CSLD5_ARATH (Cellulose synthase-like protein D5 OS=Arabidopsis thaliana GN=CSLD5 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.417e-19
Identity = 45/102 (44.12%), Postives = 64/102 (62.75%), Query Frame = 2
Query:    2 KEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERV 307
            KEP +   NT+LS +A+DYP EKL  YLSDDGGA +T   + +   FA +W+PFC++  I+   PEAYF    N   +    +F+ ER ++K +Y EFK R+
Sbjct:  413 KEPPLVTANTILSILAVDYPVEKLACYLSDDGGALLTFEALAQTASFASTWVPFCRKHNIEPRNPEAYFGQKRNFLKNKVRLDFVRERRRVKREYDEFKVRI 514          
BLAST of EY665855 vs. ExPASy Swiss-Prot
Match: CSLD3_ARATH (Cellulose synthase-like protein D3 OS=Arabidopsis thaliana GN=CSLD3 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.417e-19
Identity = 45/102 (44.12%), Postives = 65/102 (63.73%), Query Frame = 2
Query:    2 KEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERV 307
            KEP +   NT+LS +A DYP EKL  Y+SDDGGA +T   M EA  FA  W+PFC++  I+   P++YFS   +   +   A+F+ +R ++K +Y EFK R+
Sbjct:  389 KEPPLVTSNTILSILAADYPVEKLACYVSDDGGALLTFEAMAEAASFANMWVPFCRKHNIEPRNPDSYFSLKRDPYKNKVKADFVKDRRRVKREYDEFKVRI 490          
BLAST of EY665855 vs. ExPASy Swiss-Prot
Match: CSLF4_ORYSJ (Mixed-linked glucan synthase 4 OS=Oryza sativa subsp. japonica GN=CSLF4 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.123e-19
Identity = 58/222 (26.13%), Postives = 98/222 (44.14%), Query Frame = 2
Query:    5 EPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAIEKWGLENEGISRSRD--------------------------------HPSVVEVI-----------GXXXXXXXXXXXXXXXKMPLLVYVAREKRPSHPHNFKAGALNVLV*SSLII 541
            EP +  +N++LS +A DYP ++   YLSDDGG  +    M E  KFA  W+PFC++  ++   PE+YF+            E + +R +++ +Y EFK R+          ++  +R++D                                H  +V+V+                           ++P+LVY++REKRP + H  KAGA+N L+  S ++
Sbjct:  190 EPILYTVNSILSILAADYPVDRYACYLSDDGGTLVHYEAMVEVAKFAELWVPFCRKHCVEPRAPESYFAMKTQAYRGGVAGELMSDRRRVRREYEEFKVRIDSLFSTIRKRSDAYNRAKDGKDDGENATWMADGTHWPGTWFEPAENHRKGQHAGIVQVLLNHPTSKPRFGVAASVDNPLDFSGVDVRLPMLVYISREKRPGYNHQKKAGAMNALLRVSALL 411          
BLAST of EY665855 vs. ExPASy Swiss-Prot
Match: CSLD1_ARATH (Cellulose synthase-like protein D1 OS=Arabidopsis thaliana GN=CSLD1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.123e-19
Identity = 45/102 (44.12%), Postives = 66/102 (64.71%), Query Frame = 2
Query:    2 KEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERV 307
            KEP +   NT+LS +A+DYP EKL  Y+SDDGGA +T   M EA +FA  W+PFC++  I+   P++YFS  ++   +    +F+ +R  IK +Y EFK R+
Sbjct:  278 KEPPLVTANTLLSILAVDYPIEKLSAYISDDGGAILTFEAMAEAVRFAEYWVPFCRKHDIEPRNPDSYFSIKKDPTKNKKRQDFVKDRRWIKREYDEFKVRI 379          
BLAST of EY665855 vs. ExPASy Swiss-Prot
Match: CSLD4_ARATH (Cellulose synthase-like protein D4 OS=Arabidopsis thaliana GN=CSLD4 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.385e-19
Identity = 45/102 (44.12%), Postives = 65/102 (63.73%), Query Frame = 2
Query:    2 KEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERV 307
            KEP +   NT+LS +A+DYP EK+  YLSDDGGA ++   M EA  FA  W+PFC++  I+   P++YFS   +   +    +F+ +R KIK +Y EFK R+
Sbjct:  367 KEPPLVTANTILSILAVDYPVEKVSCYLSDDGGALLSFEAMAEAASFADLWVPFCRKHNIEPRNPDSYFSLKIDPTKNKSRIDFVKDRRKIKREYDEFKVRI 468          
The following BLAST results are available for this feature:
BLAST of EY665855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CSLB5_ARATH1.400e-2232.04Cellulose synthase-like protein B5 OS=Arabidopsis ... [more]
CSLB6_ARATH1.788e-2231.79Cellulose synthase-like protein B6 OS=Arabidopsis ... [more]
CSLB1_ARATH3.051e-2229.92Cellulose synthase-like protein B1 OS=Arabidopsis ... [more]
CSLD4_ORYSJ6.796e-2247.06Cellulose synthase-like protein D4 OS=Oryza sativa... [more]
CSLF6_ORYSJ1.674e-2030.04Probable mixed-linked glucan synthase 6 OS=Oryza s... [more]
CSLD5_ARATH1.417e-1944.12Cellulose synthase-like protein D5 OS=Arabidopsis ... [more]
CSLD3_ARATH2.417e-1944.12Cellulose synthase-like protein D3 OS=Arabidopsis ... [more]
CSLF4_ORYSJ4.123e-1926.13Mixed-linked glucan synthase 4 OS=Oryza sativa sub... [more]
CSLD1_ARATH4.123e-1944.12Cellulose synthase-like protein D1 OS=Arabidopsis ... [more]
CSLD4_ARATH5.385e-1944.12Cellulose synthase-like protein D4 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-006-D04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665855 ID=EY665855; Name=EY665855; organism=Citrus sinensis; type=EST; length=869bp
TAAAGAGCCAACTGTGGAGGTAATGAATACGGTTTTGTCAGCTATGGCGC
TTGATTATCCGCCAGAGAAGCTGCATGTTTACCTTTCAGACGATGGAGGT
GCTTCTATAACTTTGCTTGGTATGAGGGAAGCTTGGAAGTTTGCAAGATC
GTGGCTTCCGTTTTGTAAGAGGTTTGGGATCAAAACAATATGCCCTGAAG
CTTATTTTTCTGATCCAGAGAATGGTGATGGTGACTCTGGAAATGCTGAG
TTCATTGTTGAGAGGGAAAAGATTAAGGAAAAATACACTGAGTTCAAGGA
ACGGGTAACGAGAGCCATTGAAAAATGGGGGCTAGAGAACGAAGGCATTT
CCAGAAGTCGAGATCATCCTTCTGTGGTTGAGGTGATAGGAGAAAACGAT
AATGAAGCAGCGAATGAGGAACAACAAATGAATAATAAGATGCCTCTCCT
TGTCTATGTTGCTCGCGAGAAAAGGCCTTCTCATCCACACAATTTCAAGG
CTGGAGCCTTAAACGTTCTTGTATGATCTTCTCTAATCATTCACACTCAC
ACACACATGGTGCATAATTTAATTGCATGCATATGCTTAATAGAAGCTGT
TGTTGATGTTGTAGCTTCGGGTTTCCGGGGGAATGAGCAACTCTCCCTAT
ATATTGATGCTAGACTGGGGCATGGTATTGCATGGACCCACTTTCGGGTT
AGGCAAGCCCTTGTGTTTCCCCCTTTGTTCCCAAAATCCTCTTCCTCCGT
TACCTTTCGTTCAGTTTCCCCCAAAAATTTTCTTAAAATTCCTCCCCGGA
TTGGTATTTTTTGGACCCCCCCCGTCCCCAAATTTTTTTCTTGGGGGAAT
GACCCTTATTTGAACCCCC
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