EY665855

Overview
NameEY665855
Unique NameEY665855
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665855 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSJ (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. japonica GN=CSLD2 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.385e-19
Identity = 44/102 (43.14%), Postives = 65/102 (63.73%), Query Frame = 2
Query:    2 KEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERV 307
            KEP +   NT+LS +A DYP EKL  Y+SDDGGA +T   M EA  FA  W+PFC++  I+   PE+YF+   +   +   ++F+ +R ++K +Y EFK R+
Sbjct:  411 KEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANMWVPFCRKHDIEPRNPESYFNLKRDPYKNKVRSDFVKDRRRVKREYDEFKVRI 512          
BLAST of EY665855 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSI (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. indica GN=CSLD2 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.385e-19
Identity = 44/102 (43.14%), Postives = 65/102 (63.73%), Query Frame = 2
Query:    2 KEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERV 307
            KEP +   NT+LS +A DYP EKL  Y+SDDGGA +T   M EA  FA  W+PFC++  I+   PE+YF+   +   +   ++F+ +R ++K +Y EFK R+
Sbjct:  411 KEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANMWVPFCRKHDIEPRNPESYFNLKRDPYKNKVRSDFVKDRRRVKREYDEFKVRI 512          
BLAST of EY665855 vs. ExPASy Swiss-Prot
Match: CSLF8_ORYSJ (Probable mixed-linked glucan synthase 8 OS=Oryza sativa subsp. japonica GN=CSFL8 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.200e-18
Identity = 64/212 (30.19%), Postives = 92/212 (43.40%), Query Frame = 2
Query:    5 EPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAI--------------------EKW---GLENEGI-------SRSRDHPSVVEVIGXXXXXXXXXXXXXXXKMP-----------LLVYVAREKRPSHPHNFKAGALNV 517
            EP +  MN +LS +A DYP +K   YLSDDGG+ I   G+ E  KFA  W+PFC++  I+   PE+YF+        S   +F+ +   ++ +Y EFK R+                          W   G E  G         +  +H  +V+V+                  P           +LVY+AREKRP + H  KAGA+NV
Sbjct:  184 EPMIYTMNAILSILAADYPVDKHACYLSDDGGSIIHYDGLLETAKFAALWVPFCRKHSIEPRAPESYFAVKSRPYAGSAPEDFLSDHRYMRREYDEFKVRLDALFTVIPKRSDAYNQAHAEEGVKATWMADGTEWPGTWIDPSENHKKGNHAGIVQVMLNHPSNQPQLGLPASTDSPVDFSNVDVRLPMLVYIAREKRPGYDHQKKAGAMNV 395          
BLAST of EY665855 vs. ExPASy Swiss-Prot
Match: CSLD3_ORYSJ (Cellulose synthase-like protein D3 OS=Oryza sativa subsp. japonica GN=CSLD3 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 3.490e-18
Identity = 46/105 (43.81%), Postives = 65/105 (61.90%), Query Frame = 2
Query:    2 KEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFS---DPENGDGDSGNAEFIVEREKIKEKYTEFKERV 307
            KEP +    T+LS +A+DYP EKL  Y+SDDGGA +T   M EA  FA  W+PFCK+  I+   P++YFS   DP  G       +F+ +R ++K ++ EFK R+
Sbjct:  392 KEPVLTTATTILSILAVDYPVEKLACYVSDDGGALLTFEAMAEAASFANVWVPFCKKHDIEPRNPDSYFSVKGDPTKG---KRRNDFVKDRRRVKREFDEFKVRI 493          
BLAST of EY665855 vs. ExPASy Swiss-Prot
Match: CSLD2_ARATH (Cellulose synthase-like protein D2 OS=Arabidopsis thaliana GN=CSLD2 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.490e-18
Identity = 43/102 (42.16%), Postives = 65/102 (63.73%), Query Frame = 2
Query:    2 KEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERV 307
            KEP +   NT+LS +A +YP EKL  Y+SDDGGA +T   M EA  FA  W+PFC++  I+   P++YFS   +   +   ++F+ +R ++K ++ EFK RV
Sbjct:  392 KEPPLVTANTILSILAAEYPVEKLSCYVSDDGGALLTFEAMAEAASFANIWVPFCRKHAIEPRNPDSYFSLKRDPYKNKVKSDFVKDRRRVKREFDEFKVRV 493          
BLAST of EY665855 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSJ (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. japonica GN=CSLD1 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.559e-18
Identity = 43/102 (42.16%), Postives = 64/102 (62.75%), Query Frame = 2
Query:    2 KEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERV 307
            KEP +   NT+LS +A DYP +KL  Y+SDDGGA +T   M EA  FA  W+PFC++  I+   P++YF+   +   +    +F+ +R ++K +Y EFK RV
Sbjct:  362 KEPVLVTANTILSILAADYPVDKLACYVSDDGGALLTFEAMAEAASFANLWVPFCRKHEIEPRNPDSYFNLKRDPFKNKVKGDFVKDRRRVKREYDEFKVRV 463          
BLAST of EY665855 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSI (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. indica GN=CSLD1 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 4.559e-18
Identity = 43/102 (42.16%), Postives = 64/102 (62.75%), Query Frame = 2
Query:    2 KEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERV 307
            KEP +   NT+LS +A DYP +KL  Y+SDDGGA +T   M EA  FA  W+PFC++  I+   P++YF+   +   +    +F+ +R ++K +Y EFK RV
Sbjct:  362 KEPVLVTANTILSILAADYPVDKLACYVSDDGGALLTFEAMAEAASFANLWVPFCRKHEIEPRNPDSYFNLKRDPFKNKVKGDFVKDRRRVKREYDEFKVRV 463          
BLAST of EY665855 vs. ExPASy Swiss-Prot
Match: CSLF2_ORYSJ (Mixed-linked glucan synthase 2 OS=Oryza sativa subsp. japonica GN=CSLF2 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.954e-18
Identity = 60/218 (27.52%), Postives = 95/218 (43.58%), Query Frame = 2
Query:    5 EPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERV-----------------------------TRAIEKWGLENEGISRSR---------DHPSVVEVIG-XXXXXXXXXXXXXXXKMPLLVYVAREKRPSHPHNFKAGALNVLV*SSLII 541
            EP +  +NT+LS +A DYP ++   YLSDDGG  +    M E  KFA  W+PFC++  ++   PE YF+            E + +  +++ +Y EFK R+                             T     W    +   R +         +HPS    +G                ++P+LVY++REKRP + H  KAGA+NV++  S ++
Sbjct:  184 EPILYTVNTILSILAADYPVDRYACYLSDDGGTLVHYEAMVEVAKFAELWVPFCRKHCVEPRSPENYFAMKTQAYKGGVPGELMSDHRRVRREYEEFKVRIDSLSSTIRQRSDVYNAKHAGENATWMADGTHWPGTWFEPADNHQRGKHAGIVQVLLNHPSCKPRLGLAASAENPVDFSGVDVRLPMLVYISREKRPGYNHQKKAGAMNVMLRVSALL 401          
BLAST of EY665855 vs. ExPASy Swiss-Prot
Match: CSLF1_ORYSJ (Putative mixed-linked glucan synthase 1 OS=Oryza sativa subsp. japonica GN=CSFL1 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.954e-18
Identity = 60/218 (27.52%), Postives = 95/218 (43.58%), Query Frame = 2
Query:    5 EPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERV-----------------------------TRAIEKWGLENEGISRSR---------DHPSVVEVIG-XXXXXXXXXXXXXXXKMPLLVYVAREKRPSHPHNFKAGALNVLV*SSLII 541
            EP +  +NT+LS +A DYP ++   YLSDDGG  +    M E  KFA  W+PFC++  ++   PE YF+            E + +  +++ +Y EFK R+                             T     W    +   R +         +HPS    +G                ++P+LVY++REKRP + H  KAGA+NV++  S ++
Sbjct:  154 EPILYTVNTILSILAADYPVDRYACYLSDDGGTLVHYEAMVEVAKFAELWVPFCRKHCVEPRSPENYFAMKTQAYKGGVPGELMSDHRRVRREYEEFKVRIDSLSSTIRQRSDVYNAKHAGENATWMADGTHWPGTWFEPADNHQRGKHAGIVQVLLNHPSCKPRLGLAASAENPVDFSGVDVRLPMLVYISREKRPGYNHQKKAGAMNVMLRVSALL 371          
BLAST of EY665855 vs. ExPASy Swiss-Prot
Match: CSLH3_ORYSJ (Putative cellulose synthase-like protein H3 OS=Oryza sativa subsp. japonica GN=CSLH3 PE=3 SV=3)

HSP 1 Score: 90.1225 bits (222), Expect = 1.732e-17
Identity = 63/205 (30.73%), Postives = 102/205 (49.76%), Query Frame = 2
Query:   68 KLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYF-SDPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAIEKWGLENEG-------ISRSRDHPSVVEVIGXXXXXXXXXXXXXXXKMPLLVYVAREKRPSHPHNFKAGALN-------VLV*SSLIIHTHTHMVHN----LIACICLIEAVVDVVASGF 625
            +L  Y+SDDG + +T   +REA  FAR+W+PFC+R G+    P  YF S PE G  D    +F+ +   +K +Y +   R+  A E   L   G        ++  +H ++V+VI                  P L+YV+REK P H H++KAGA+N       V+  + ++++    M  N    ++  +CL+    D ++SGF
Sbjct:  173 RLACYVSDDGCSPVTYYALREAAGFARTWVPFCRRHGVAVRAPFRYFASAPEFGPAD---RKFLDDWTFMKSEYDKLVRRIEDADETTLLRQGGGEFAEFMDAKRTNHRAIVKVI---WDNNSKNRIGEEGGFPHLIYVSREKSPGHHHHYKAGAMNALTRVSAVMTNAPIMLNVDCDMFANDPQVVLHAMCLLLGFDDEISSGF 371          
The following BLAST results are available for this feature:
BLAST of EY665855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CSLD2_ORYSJ5.385e-1943.14Cellulose synthase-like protein D2 OS=Oryza sativa... [more]
CSLD2_ORYSI5.385e-1943.14Cellulose synthase-like protein D2 OS=Oryza sativa... [more]
CSLF8_ORYSJ1.200e-1830.19Probable mixed-linked glucan synthase 8 OS=Oryza s... [more]
CSLD3_ORYSJ3.490e-1843.81Cellulose synthase-like protein D3 OS=Oryza sativa... [more]
CSLD2_ARATH3.490e-1842.16Cellulose synthase-like protein D2 OS=Arabidopsis ... [more]
CSLD1_ORYSJ4.559e-1842.16Cellulose synthase-like protein D1 OS=Oryza sativa... [more]
CSLD1_ORYSI4.559e-1842.16Cellulose synthase-like protein D1 OS=Oryza sativa... [more]
CSLF2_ORYSJ5.954e-1827.52Mixed-linked glucan synthase 2 OS=Oryza sativa sub... [more]
CSLF1_ORYSJ5.954e-1827.52Putative mixed-linked glucan synthase 1 OS=Oryza s... [more]
CSLH3_ORYSJ1.732e-1730.73Putative cellulose synthase-like protein H3 OS=Ory... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-006-D04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665855 ID=EY665855; Name=EY665855; organism=Citrus sinensis; type=EST; length=869bp
TAAAGAGCCAACTGTGGAGGTAATGAATACGGTTTTGTCAGCTATGGCGC
TTGATTATCCGCCAGAGAAGCTGCATGTTTACCTTTCAGACGATGGAGGT
GCTTCTATAACTTTGCTTGGTATGAGGGAAGCTTGGAAGTTTGCAAGATC
GTGGCTTCCGTTTTGTAAGAGGTTTGGGATCAAAACAATATGCCCTGAAG
CTTATTTTTCTGATCCAGAGAATGGTGATGGTGACTCTGGAAATGCTGAG
TTCATTGTTGAGAGGGAAAAGATTAAGGAAAAATACACTGAGTTCAAGGA
ACGGGTAACGAGAGCCATTGAAAAATGGGGGCTAGAGAACGAAGGCATTT
CCAGAAGTCGAGATCATCCTTCTGTGGTTGAGGTGATAGGAGAAAACGAT
AATGAAGCAGCGAATGAGGAACAACAAATGAATAATAAGATGCCTCTCCT
TGTCTATGTTGCTCGCGAGAAAAGGCCTTCTCATCCACACAATTTCAAGG
CTGGAGCCTTAAACGTTCTTGTATGATCTTCTCTAATCATTCACACTCAC
ACACACATGGTGCATAATTTAATTGCATGCATATGCTTAATAGAAGCTGT
TGTTGATGTTGTAGCTTCGGGTTTCCGGGGGAATGAGCAACTCTCCCTAT
ATATTGATGCTAGACTGGGGCATGGTATTGCATGGACCCACTTTCGGGTT
AGGCAAGCCCTTGTGTTTCCCCCTTTGTTCCCAAAATCCTCTTCCTCCGT
TACCTTTCGTTCAGTTTCCCCCAAAAATTTTCTTAAAATTCCTCCCCGGA
TTGGTATTTTTTGGACCCCCCCCGTCCCCAAATTTTTTTCTTGGGGGAAT
GACCCTTATTTGAACCCCC
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