EY665855
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665855 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSI (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. indica GN=CSLF3 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.278e-16 Identity = 66/221 (29.86%), Postives = 94/221 (42.53%), Query Frame = 2 Query: 5 EPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAIE----------------------------KW-GLENEGISRSR--DHPSVVEVI-----------GXXXXXXXXXXXXXXXKMPLLVYVAREKRPSHPHNFKAGALNVLV*SSLII 541 EP + MN VLS +A DYP ++ YLSDD GA I + E KFA W+PFC++ I+ PE+YF S EF + + +Y EFK R+ E +W G E I R H +V+V+ ++P+LVYV+R K P++ HN KAGALN + +S ++ Sbjct: 182 EPVLYTMNCVLSILAADYPVDRSACYLSDDSGALILYEALVETAKFATLWVPFCRKHCIEPRSPESYFELEAPSYTGSAQEEFKNDSRIVHLEYDEFKVRLEALPETIRKRSDVYNSMKTDQGAPNATWMANGTQWPGTWIEPIENHRKGHHAGIVKVVLDHPIRGHNLSLKDSTGNNLNFNATDVRIPMLVYVSRGKNPNYDHNKKAGALNAQLRASALL 402
BLAST of EY665855 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSJ (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. japonica GN=CSLF3 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.241e-15 Identity = 66/221 (29.86%), Postives = 94/221 (42.53%), Query Frame = 2 Query: 5 EPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAIE----------------------------KW-GLENEGISRSR--DHPSVVEVI-----------GXXXXXXXXXXXXXXXKMPLLVYVAREKRPSHPHNFKAGALNVLV*SSLII 541 EP + MN VLS +A DYP ++ YLSDD GA I + E KFA W+PFC++ I+ PE+YF S EF + + +Y EFK R+ E +W G E I R H +V+V+ ++P+LVYV+R K P++ HN KAGALN + +S ++ Sbjct: 182 EPVLYTMNCVLSILAADYPVDRSACYLSDDSGALILYEALVETAKFATLWVPFCRKHCIEPRSPESYFELEAPSYTGSAPEEFKNDSRIVHLEYDEFKVRLEALPETIRKRSDVYNSMKTDQGAPNATWMANGTQWPGTWIEPIENHRKGHHAGIVKVVLDHPIRGHNLSLKDSTGNNLNFNATDVRIPMLVYVSRGKNPNYDHNKKAGALNAQLRASALL 402
BLAST of EY665855 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSJ (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. japonica GN=CSLH2 PE=2 SV=3) HSP 1 Score: 82.4185 bits (202), Expect = 3.612e-15 Identity = 47/137 (34.31%), Postives = 77/137 (56.20%), Query Frame = 2 Query: 5 EPTVEVMNTVLSAMALDYPP--EKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDPENGD-GDSGNAEFIVEREKIKEKYTEFKERVTRAIEKWGLENEGIS--------RSRDHPSVVE 382 EP + +NTVLS +ALDYP E+L Y+SDDG + +T +REA FA +W+PFC+R+G+ P YFS + + G + +F+ + +K++Y + R+ E+ L + G R+HP++V+ Sbjct: 149 EPPLVTVNTVLSLLALDYPRAGERLACYVSDDGCSPLTCHALREAAGFAAAWVPFCRRYGVAVRAPFRYFSSSSSPESGGPADRKFLDDWTFMKDEYDKLVRRIKNTDERSLLRHGGGEFFAEFLNVERRNHPTIVK 285
BLAST of EY665855 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSI (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. indica GN=CSLH2 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.612e-15 Identity = 47/137 (34.31%), Postives = 77/137 (56.20%), Query Frame = 2 Query: 5 EPTVEVMNTVLSAMALDYPP--EKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDPENGD-GDSGNAEFIVEREKIKEKYTEFKERVTRAIEKWGLENEGIS--------RSRDHPSVVE 382 EP + +NTVLS +ALDYP E+L Y+SDDG + +T +REA FA +W+PFC+R+G+ P YFS + + G + +F+ + +K++Y + R+ E+ L + G R+HP++V+ Sbjct: 149 EPPLVTVNTVLSLLALDYPRAGERLACYVSDDGCSPLTCHALREAAGFAAAWVPFCRRYGVAVRAPFRYFSSSSSPESGGPADRKFLDDWTFMKDEYDKLVRRIKNTDERSLLRHGGGEFFAEFLNVERRNHPTIVK 285
BLAST of EY665855 vs. ExPASy Swiss-Prot
Match: CSLF9_ORYSJ (Probable mixed-linked glucan synthase 9 OS=Oryza sativa subsp. japonica GN=CSLF9 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 8.047e-15 Identity = 58/212 (27.36%), Postives = 88/212 (41.51%), Query Frame = 2 Query: 5 EPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYF-SDPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAIEKWGLENEGI------------------------------SRSRDHPSVVEVIGXXXXXXXXXXXXXXXKMPL-----------LVYVAREKRPSHPHNFKAGALN 514 EP + MN++LS +A DYP ++ YLSDDG + G+ E +FA W+PFC++ ++ PE+YF + G + EF +R ++ +Y EFK R+ +E + H +V+V+ PL LVY+AREKRP + H KAGA+N Sbjct: 166 EPMLYTMNSILSILATDYPADRHAAYLSDDGASLAHYEGLIETARFAALWVPFCRKHRVEPRAPESYFAAKAAPYAGPALPEEFFGDRRLVRREYEEFKARLDALFTDIPQRSEASVGNANTKGAKATLMADGTPWPGTWTEPAENHKKGQHAGIVKVMLSHPGEEPQLGMPASSGHPLDFSAVDVRLPILVYIAREKRPGYDHQKKAGAMN 377 The following BLAST results are available for this feature:
BLAST of EY665855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665855 ID=EY665855; Name=EY665855; organism=Citrus sinensis; type=EST; length=869bpback to top |