CX675252

Overview
NameCX675252
Unique NameCX675252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length819
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675252 vs. ExPASy Swiss-Prot
Match: CST1_CAEEL (Serine/threonine-protein kinase cst-1 OS=Caenorhabditis elegans GN=cst-1 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.300e-19
Identity = 55/180 (30.56%), Postives = 105/180 (58.33%), Query Frame = 1
Query:  283 IFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQ-KSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLXGRPKITDFGISAGLXNSIAMCATFVGTVTYMSPERIRNESYSYPA 819
            I G +G G+   V +A+H  +  ++A+KK+ +       +++ EI  + +   ++ +V+++G+++      + I +EY   GS++DI+R + K + E  +S++ +  L+GL YLH ++  +HRDIK  N+L+N  G  K+ DFG++  L +++A   T +GT  +M+PE I    Y   A
Sbjct:   37 IVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV--DTDLQEIIKEISIMQQCK-SKYVVKYYGSYFK--HSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKK-IHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEIGYDTKA 210          
BLAST of CX675252 vs. ExPASy Swiss-Prot
Match: MP2K6_DANRE (Dual specificity mitogen-activated protein kinase kinase 6 OS=Danio rerio GN=map2k6 PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 2.217e-19
Identity = 60/190 (31.58%), Postives = 101/190 (53.16%), Query Frame = 1
Query:  247 EKTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGS---LADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLXGRPKITDFGISAGLXNSIAMCATFVGTVTYMSPERIRNES 804
            EK +   + ++   G +G GA  VV +  H+P+  I+A+K+I      +++ +LL ++            V F+GA +    G + I +E MD         +    K+IPE IL  +   +++ L +LH    ++HRD+KP+N+L+N+ G+ K+ DFGIS  L +S+A      G   YM+PERI  E+
Sbjct:   70 EKNFVVKADDLEQIGELGRGAYGVVDKMRHVPSGVIMAVKRIRATVNTQEQKRLLMDLDISMRTVDCFYTVTFYGALFR--EGDVWICMELMDTSLDKFYKQVHEKGKTIPEDILGKITVSIVKALEHLHSNLSVIHRDVKPSNVLINMQGQVKMCDFGISGYLVDSVAKTMD-AGCKPYMAPERINPET 256          
BLAST of CX675252 vs. ExPASy Swiss-Prot
Match: STK4_CHICK (Serine/threonine-protein kinase 4 OS=Gallus gallus GN=STK4 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.895e-19
Identity = 53/175 (30.29%), Postives = 109/175 (62.29%), Query Frame = 1
Query:  295 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTL--CEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQ-KSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLXGRPKITDFGISAGLXNSIAMCATFVGTVTYMSPERIRNESYS 810
            +G G+   V +A+H  T +++A+K++ +  +    +++ EI  +  C++P    +V+++G+++   +  + I +EY   GS++DI+R++ K++ E  ++++ +  L+GL YLH +R  +HRDIK  N+L+N  G  K+ DFG++  L +++A   T +GT  +M+P  I+   Y+
Sbjct:   35 LGEGSYGSVFKAIHKETGQVVAIKQVPV--ESDLQEIIKEISIMQQCDSP---HVVKYYGSYFK--NTDLWIVMEYCGAGSVSDIIRLRNKTLTEEEIATIVQSTLKGLEYLHFMRK-IHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPGVIQEIGYN 201          
BLAST of CX675252 vs. ExPASy Swiss-Prot
Match: PAK2_HUMAN (Serine/threonine-protein kinase PAK 2 OS=Homo sapiens GN=PAK2 PE=1 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 2.895e-19
Identity = 71/254 (27.95%), Postives = 130/254 (51.18%), Query Frame = 1
Query:   61 LAPLFDAEKGFSAGSTLDP-----SDSYMLSDGGTVNLLSRSYGVYNFNELGLQKCTSWLADESDHSEKTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLXGRPKITDFGISAGLXNSIAMCATFVGTVTYMSPERIRNESY 807
            +AP  D  K     S +DP      DS++  DG   +L  +       +E  ++K  + +    D  +K  R        +  IG GAS  V  A  +   + +A+K+IN+ ++ K+  ++ EI  + E   N  +V F  ++ + D  ++ + +EY+ GGSL D++  +  + E  ++++ ++ LQ L +LH    ++HRDIK  N+L+ + G  K+TDFG  A +    +  +T VGT  +M+PE +  ++Y
Sbjct:  183 IAPRPDHTKSIYTRSVIDPVPAPVGDSHV--DGAAKSLDKQKKKTKMTDEEIMEKLRT-IVSIGDPKKKYTR--------YEKIGQGASGTVFTATDVALGQEVAIKQINLQKQPKKELIINEILVMKELK-NPNIVNFLDSYLVGD--ELFVVMEYLAGGSLTDVVT-ETCMDEAQIAAVCRECLQALEFLHA-NQVIHRDIKSDNVLLGMEGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY 420          
BLAST of CX675252 vs. ExPASy Swiss-Prot
Match: STK4_SQUAC (Serine/threonine-protein kinase 3/4 OS=Squalus acanthias GN=STK4 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.781e-19
Identity = 52/175 (29.71%), Postives = 110/175 (62.86%), Query Frame = 1
Query:  295 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTL--CEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQ-KSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLXGRPKITDFGISAGLXNSIAMCATFVGTVTYMSPERIRNESYS 810
            +G G+   V +A+H  + +++A+K++ +  +    +++ EI  +  C++P    +V+++G+++   +  + I +EY   GS++D++R++ K++ E  ++++ +  L+GL YLH +R  +HRDIK  N+L+N  G  K+ DFG++  L +++A   T +GT  +M+PE I+   Y+
Sbjct:   38 LGEGSYGSVFKAIHKESGQVVAIKQVPV--ESDLQEIIKEISIMQQCDSP---HVVKYYGSYFK--NTDLWIVMEYCGAGSVSDLIRIRNKTLTEDEIATILQSTLKGLEYLHFMRK-IHRDIKAGNILLNNEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYN 204          
BLAST of CX675252 vs. ExPASy Swiss-Prot
Match: STK3_XENLA (Serine/threonine-protein kinase 3 OS=Xenopus laevis GN=stk3 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.781e-19
Identity = 51/173 (29.48%), Postives = 108/173 (62.43%), Query Frame = 1
Query:  295 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQ-KSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLXGRPKITDFGISAGLXNSIAMCATFVGTVTYMSPERIRNESYS 810
            +G G+   V +A+H  + +++A+K++ +  +    +++ EI  + +   +  +V+++G+++   +  + I +EY   GS++DI+R++ K++ E  ++++ +  L+GL YLH +R  +HRDIK  N+L+N  G  K+ DFG++  L +++A   T +GT  +M+PE I+   Y+
Sbjct:   32 LGEGSYGSVFKAIHKESGQVVAIKQVPV--ESDLQEIIKEISIMQQCDSHY-VVKYYGSYFK--NTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILRSTLKGLEYLHFMRK-IHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYN 198          
BLAST of CX675252 vs. ExPASy Swiss-Prot
Match: STK4_XENTR (Serine/threonine-protein kinase 4 OS=Xenopus tropicalis GN=stk4 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.939e-19
Identity = 54/173 (31.21%), Postives = 106/173 (61.27%), Query Frame = 1
Query:  295 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLXGRPKITDFGISAGLXNSIAMCATFVGTVTYMSPERIRNESYS 810
            +G G+   V +A H  T +I+A+K+I +  +    +++ EI  + +      +V+++G+++   +  + I +E+  GGS++DI+R++K ++ E   +++ +  L+GL YLH +R  +HRDIK  N+L+N  G  K+ DFG++  L +++A   T +GT  +M+PE I+   Y+
Sbjct:   36 LGEGSYGSVYKASHKETSQIVAIKQIPV--ESDLQEIIKEIAIMQQCDSLH-VVKYYGSYFK--NTDLWIVMEFCGGGSISDIIRLRKQTLKEDETATILQSTLKGLEYLHFMRK-IHRDIKAGNILLNSEGTAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYN 202          
BLAST of CX675252 vs. ExPASy Swiss-Prot
Match: STE20_ASHGO (Serine/threonine-protein kinase STE20 OS=Ashbya gossypii GN=STE20 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.939e-19
Identity = 54/171 (31.58%), Postives = 101/171 (59.06%), Query Frame = 1
Query:  295 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLXGRPKITDFGISAGLXNSIAMCATFVGTVTYMSPERIRNESY 807
            IG GAS  V  A  I T+  +A+K++N+ ++ K+  ++ EI  + +   +  +V F  ++ +   G + + +EYM+GGSL D++     + E  ++++ ++ L+GL +LH  + ++HRDIK  N+L+++ G  K+TDFG  A +  +     T VGT  +M+PE +  + Y
Sbjct:  689 IGQGASGGVYTAYEIGTNASVAIKQMNLEKQPKKELIINEILVM-KGSRHNNIVNFIDSYLL--KGDLWVIMEYMEGGSLTDVVT-HCILTEGQIAAVSRETLRGLHFLHS-KGVIHRDIKSDNILLSMDGNIKLTDFGFCAQINETNLKRTTMVGTPYWMAPEVVSRKEY 854          
BLAST of CX675252 vs. ExPASy Swiss-Prot
Match: PAK2_RAT (Serine/threonine-protein kinase PAK 2 OS=Rattus norvegicus GN=Pak2 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.939e-19
Identity = 54/171 (31.58%), Postives = 100/171 (58.48%), Query Frame = 1
Query:  295 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLXGRPKITDFGISAGLXNSIAMCATFVGTVTYMSPERIRNESY 807
            IG GAS  V  A  +   + +A+K+IN+ ++ K+  ++ EI  + E   N  +V F  ++ + D  ++ + +EY+ GGSL D++  +  + E  ++++ ++ LQ L +LH    ++HRDIK  N+L+ + G  K+TDFG  A +    +  +T VGT  +M+PE +  ++Y
Sbjct:  255 IGQGASGTVFTATDVALGQEVAIKQINLQKQPKKELIINEILVMKELK-NPNIVNFLDSYLVGD--ELFVVMEYLAGGSLTDVVT-ETCMDEAQIAAVCRECLQALEFLHA-NQVIHRDIKSDNVLLGMEGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY 420          
BLAST of CX675252 vs. ExPASy Swiss-Prot
Match: PAK2_RABIT (Serine/threonine-protein kinase PAK 2 OS=Oryctolagus cuniculus GN=PAK2 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.939e-19
Identity = 54/171 (31.58%), Postives = 100/171 (58.48%), Query Frame = 1
Query:  295 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLXGRPKITDFGISAGLXNSIAMCATFVGTVTYMSPERIRNESY 807
            IG GAS  V  A  +   + +A+K+IN+ ++ K+  ++ EI  + E   N  +V F  ++ + D  ++ + +EY+ GGSL D++  +  + E  ++++ ++ LQ L +LH    ++HRDIK  N+L+ + G  K+TDFG  A +    +  +T VGT  +M+PE +  ++Y
Sbjct:  255 IGQGASGTVFTATDVALGQEVAIKQINLQKQPKKELIINEILVMKELK-NPNIVNFLDSYLVGD--ELFVVMEYLAGGSLTDVVT-ETCMDEAQIAAVCRECLQALEFLHA-NQVIHRDIKSDNVLLGMEGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY 420          
The following BLAST results are available for this feature:
BLAST of CX675252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CST1_CAEEL1.300e-1930.56Serine/threonine-protein kinase cst-1 OS=Caenorhab... [more]
MP2K6_DANRE2.217e-1931.58Dual specificity mitogen-activated protein kinase ... [more]
STK4_CHICK2.895e-1930.29Serine/threonine-protein kinase 4 OS=Gallus gallus... [more]
PAK2_HUMAN2.895e-1927.95Serine/threonine-protein kinase PAK 2 OS=Homo sapi... [more]
STK4_SQUAC3.781e-1929.71Serine/threonine-protein kinase 3/4 OS=Squalus aca... [more]
STK3_XENLA3.781e-1929.48Serine/threonine-protein kinase 3 OS=Xenopus laevi... [more]
STK4_XENTR4.939e-1931.21Serine/threonine-protein kinase 4 OS=Xenopus tropi... [more]
STE20_ASHGO4.939e-1931.58Serine/threonine-protein kinase STE20 OS=Ashbya go... [more]
PAK2_RAT4.939e-1931.58Serine/threonine-protein kinase PAK 2 OS=Rattus no... [more]
PAK2_RABIT4.939e-1931.58Serine/threonine-protein kinase PAK 2 OS=Oryctolag... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_60H05_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-60H05-O10-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675252 ID=CX675252; Name=CX675252; organism=Citrus sinensis; type=EST; length=819bp
CAACAGCGAAAAAGTTCACCTTAAATTATCATGGCCGGGCTGGAGGAATT
AAAAAAGAAGCTTGCACCATTGTTTGATGCTGAAAAAGGTTTTTCTGCTG
GATCAACTCTTGACCCTTCGGATTCGTATATGCTGTCAGATGGTGGAACT
GTTAATTTATTAAGTAGATCATATGGAGTGTACAACTTTAATGAGCTCGG
ATTGCAAAAATGCACATCTTGGCTTGCTGATGAATCGGATCACAGCGAAA
AAACTTATCGATGTGCTTCTCATGAGATGAGGATTTTTGGAGCCATAGGT
AGTGGAGCAAGCAGCGTTGTTCAGAGAGCTGTCCACATTCCCACTCATAG
AATTATTGCCTTGAAGAAGATTAATATTTTTGAAAAGGAGAAAAGAAATC
AGCTTCTTACTGAGATAAGGACATTGTGCGAGGCTCCTTGTAACGAGGGT
CTTGTGGAGTTCCATGGTGCATTTTATATGCCAGACTCGGGGCAAATAAG
CATAGCTTTGGAGTACATGGATGGTGGATCTTTGGCGGATATCTTACGAA
TGCAAAAAAGTATACCAGAACCAATTCTTTCATCAATGTTTAAAAAGCTT
CTACAGGGATTAAGTTACTTACATGGAGTCAGACATTTAGTTCATAGAGA
CATTAAGCCAGCAAATCTTCTTGTAAATCTCANAGGGCGGCCGAAAATTA
CAGATTTTGGTATAAGTGCTGGCCTGNAGAATTCAATAGCAATGTGTGCT
ACTTTTGTCGGAACTGTTACATACATGTCACCTGAAAGAATTCGAAATGA
GAGCTACTCTTATCCTGCT
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