CX675252

Overview
NameCX675252
Unique NameCX675252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length819
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675252 vs. ExPASy Swiss-Prot
Match: PAK2_MOUSE (Serine/threonine-protein kinase PAK 2 OS=Mus musculus GN=Pak2 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.939e-19
Identity = 54/171 (31.58%), Postives = 100/171 (58.48%), Query Frame = 1
Query:  295 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLXGRPKITDFGISAGLXNSIAMCATFVGTVTYMSPERIRNESY 807
            IG GAS  V  A  +   + +A+K+IN+ ++ K+  ++ EI  + E   N  +V F  ++ + D  ++ + +EY+ GGSL D++  +  + E  ++++ ++ LQ L +LH    ++HRDIK  N+L+ + G  K+TDFG  A +    +  +T VGT  +M+PE +  ++Y
Sbjct:  255 IGQGASGTVFTATDVALGQEVAIKQINLQKQPKKELIINEILVMKELK-NPNIVNFLDSYLVGD--ELFVVMEYLAGGSLTDVVT-ETCMDEAQIAAVCRECLQALEFLHA-NQVIHRDIKSDNVLLGMEGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY 420          
BLAST of CX675252 vs. ExPASy Swiss-Prot
Match: STE20_MAGGR (Serine/threonine-protein kinase MST20 OS=Magnaporthe grisea GN=MST20 PE=3 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 6.450e-19
Identity = 54/176 (30.68%), Postives = 104/176 (59.09%), Query Frame = 1
Query:  280 RIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLXGRPKITDFGISAGLXNSIAMCATFVGTVTYMSPERIRNESY 807
            R F  IG GAS  V       ++R++A+K++N+ ++ K++ ++ EI  + ++  +  +V F  ++     G++ + +E+M+GGSL D++     + E  ++S+ ++ L GL +LH  + ++HRDIK  N+L+++ G  K+TDFG  A +  +     T VGT  +M+PE +  + Y
Sbjct:  635 RSFTKIGQGASGGVYTGHERGSNRLVAIKQMNLEQQPKKDLIINEILVMKDSS-HPNIVNFIDSYLC--GGELWVVMEFMEGGSLTDVVTFN-IMTEGQIASVCRETLLGLQHLHS-KGVIHRDIKSDNILLSMEGNIKLTDFGFCATINEAQNKRTTMVGTPYWMAPEVVTRKEY 805          
BLAST of CX675252 vs. ExPASy Swiss-Prot
Match: MP2K6_BOVIN (Dual specificity mitogen-activated protein kinase kinase 6 OS=Bos taurus GN=MAP2K6 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.437e-18
Identity = 56/173 (32.37%), Postives = 95/173 (54.91%), Query Frame = 1
Query:  295 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGS---LADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLXGRPKITDFGISAGLXNSIAMCATFVGTVTYMSPERIRNE 801
            +G GA  VV++  H+P+ +I+A+K+I      +++ +LL ++            V F+GA +    G + I +E MD         ++   ++IPE IL  +   +++ L +LH    ++HRD+KP+N+L+N  G+ K+ DFGIS  L +S+A      G   YM+PERI  E
Sbjct:   59 LGRGAYGVVEKMRHVPSEQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR--EGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTID-AGCKPYMAPERINPE 228          
BLAST of CX675252 vs. ExPASy Swiss-Prot
Match: FRAY2_DICDI (Serine/threonine-protein kinase fray2 OS=Dictyostelium discoideum GN=fray2 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.437e-18
Identity = 60/197 (30.46%), Postives = 109/197 (55.33%), Query Frame = 1
Query:  250 KTYRCASHEMRIFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIR------TLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQ--KSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLXGRPKITDFGISAGLXNSIAMCA-TFVGTVTYMSPERIRNESYSY 813
            K Y  ++ +  +   IG G S +VQRA+ +P    +A+K I++  +  +N  L EIR      +LC  P    +V +H +F   +S  + + ++++  GS +DI+R    +   E +++++ K+ L+ + Y H     +HRDIK  N+L++  G  +++DFG+SA L ++      TFVGT  +M+PE +   +Y Y
Sbjct:   62 KNYPNSADQYELKETIGKGGSGLVQRAICLPFQENVAIKIIDL--EHCKNVSLEEIRKEIQAMSLCHHP---NVVAYHTSFVYNES--LWVIMDFLSAGSCSDIMRFSFPQGFEEHVIATILKEALKAICYFHKTGR-IHRDIKSGNILIDSNGNIQLSDFGVSATLIDTGETSRNTFVGTPCWMAPEIMEQVNYDY 250          
BLAST of CX675252 vs. ExPASy Swiss-Prot
Match: MP2K6_MOUSE (Dual specificity mitogen-activated protein kinase kinase 6 OS=Mus musculus GN=Map2k6 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.877e-18
Identity = 56/173 (32.37%), Postives = 95/173 (54.91%), Query Frame = 1
Query:  295 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGS---LADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLXGRPKITDFGISAGLXNSIAMCATFVGTVTYMSPERIRNE 801
            +G GA  VV++  H+P+ +I+A+K+I      +++ +LL ++            V F+GA +    G + I +E MD         ++   ++IPE IL  +   +++ L +LH    ++HRD+KP+N+L+N  G+ K+ DFGIS  L +S+A      G   YM+PERI  E
Sbjct:   59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDVSMRTVDCPFTVTFYGALFR--EGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINTLGQVKMCDFGISGYLVDSVAKTID-AGCKPYMAPERINPE 228          
BLAST of CX675252 vs. ExPASy Swiss-Prot
Match: DST2_DICDI (Serine/threonine-protein kinase dst2 OS=Dictyostelium discoideum GN=dst2 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.877e-18
Identity = 63/177 (35.59%), Postives = 103/177 (58.19%), Query Frame = 1
Query:  295 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEG-LVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIP--EPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLXGRPKITDFGISAGLXNSIAMCATFVGTVTYMSPERIRNESYSYP 816
            I  G+   V +  H+PT  I+A+K I + E E    L+ EI  L    CN   +V+++G++   D  ++ IA+E   GGS+ +I + + +IP  E  ++ + ++ L+GL YLH   +++HRD+K AN+L+   G  K+ DFG+S GL +  +   TF+GT  +M+PE I N S   P
Sbjct:   26 IAEGSFGTVYKGKHLPTGNIMAVKIIALDEDETFEDLVVEIDILNR--CNHNNIVKYYGSWVKGD--ELFIAMECCGGGSITEIYQ-ELNIPLNESQIAYVCRETLKGLEYLHHT-NVIHRDLKGANILLTESGDVKLADFGVS-GLLDKSSKRNTFIGTPYWMAPEVIENRSNPVP 195          
BLAST of CX675252 vs. ExPASy Swiss-Prot
Match: STK25_HUMAN (Serine/threonine-protein kinase 25 OS=Homo sapiens GN=STK25 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.451e-18
Identity = 58/178 (32.58%), Postives = 102/178 (57.30%), Query Frame = 1
Query:  295 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKR-NQLLTEIRTL--CEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLXGRPKITDFGISAGLXNSIAMCATFVGTVTYMSPERIRNESYSYPA 819
            IG G+   V + +   T  ++A+K I++ E E     +  EI  L  C++P    +  + G++    S ++ I +EY+ GGS  D+L+    + E  ++++ +++L+GL YLH  R  +HRDIK AN+L++  G  K+ DFG++  L ++     TFVGT  +M+PE I+  +Y + A
Sbjct:   26 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY---ITRYFGSYLK--STKLWIIMEYLGGGSALDLLK-PGPLEETYIATILREILKGLDYLHSERK-IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKA 196          
BLAST of CX675252 vs. ExPASy Swiss-Prot
Match: STK25_BOVIN (Serine/threonine-protein kinase 25 OS=Bos taurus GN=STK25 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.451e-18
Identity = 58/178 (32.58%), Postives = 102/178 (57.30%), Query Frame = 1
Query:  295 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKR-NQLLTEIRTL--CEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLXGRPKITDFGISAGLXNSIAMCATFVGTVTYMSPERIRNESYSYPA 819
            IG G+   V + +   T  ++A+K I++ E E     +  EI  L  C++P    +  + G++    S ++ I +EY+ GGS  D+L+    + E  ++++ +++L+GL YLH  R  +HRDIK AN+L++  G  K+ DFG++  L ++     TFVGT  +M+PE I+  +Y + A
Sbjct:   26 IGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY---ITRYFGSYLK--STKLWIIMEYLGGGSALDLLK-PGPLEETYIATILREILKGLDYLHSERK-IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKA 196          
BLAST of CX675252 vs. ExPASy Swiss-Prot
Match: STE20_EMENI (Serine/threonine-protein kinase ste20 OS=Emericella nidulans GN=ste20 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.451e-18
Identity = 55/171 (32.16%), Postives = 101/171 (59.06%), Query Frame = 1
Query:  295 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLXGRPKITDFGISAGLXNSIAMCATFVGTVTYMSPERIRNESY 807
            IG GAS  V  A    T+  +A+K++N+  + K++ ++ EI  + ++  ++ +V F  ++       + + +EYM+GGSL D++     + EP ++++ ++ L GL +LH  + ++HRDIK  N+L++L G  K+TDFG  A + +S     T VGT  +M+PE +  + Y
Sbjct:  573 IGQGASGGVFTAYEQHTNNCVAIKQMNLDLQPKKDLIINEILVMKDSK-HKNIVNFLDSYL--HGLDLWVVMEYMEGGSLTDVVTFN-IMSEPQIAAVCRETLNGLQHLHS-KGVIHRDIKSDNILLSLDGNIKLTDFGFCAQINDSQNKRNTMVGTPYWMAPEVVTRKEY 738          
BLAST of CX675252 vs. ExPASy Swiss-Prot
Match: MP2K6_HUMAN (Dual specificity mitogen-activated protein kinase kinase 6 OS=Homo sapiens GN=MAP2K6 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.451e-18
Identity = 56/173 (32.37%), Postives = 95/173 (54.91%), Query Frame = 1
Query:  295 IGSGASSVVQRAVHIPTHRIIALKKINI-FEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGS---LADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLXGRPKITDFGISAGLXNSIAMCATFVGTVTYMSPERIRNE 801
            +G GA  VV++  H+P+ +I+A+K+I      +++ +LL ++            V F+GA +    G + I +E MD         ++   ++IPE IL  +   +++ L +LH    ++HRD+KP+N+L+N  G+ K+ DFGIS  L +S+A      G   YM+PERI  E
Sbjct:   59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR--EGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTID-AGCKPYMAPERINPE 228          
The following BLAST results are available for this feature:
BLAST of CX675252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PAK2_MOUSE4.939e-1931.58Serine/threonine-protein kinase PAK 2 OS=Mus muscu... [more]
STE20_MAGGR6.450e-1930.68Serine/threonine-protein kinase MST20 OS=Magnaport... [more]
MP2K6_BOVIN1.437e-1832.37Dual specificity mitogen-activated protein kinase ... [more]
FRAY2_DICDI1.437e-1830.46Serine/threonine-protein kinase fray2 OS=Dictyoste... [more]
MP2K6_MOUSE1.877e-1832.37Dual specificity mitogen-activated protein kinase ... [more]
DST2_DICDI1.877e-1835.59Serine/threonine-protein kinase dst2 OS=Dictyostel... [more]
STK25_HUMAN2.451e-1832.58Serine/threonine-protein kinase 25 OS=Homo sapiens... [more]
STK25_BOVIN2.451e-1832.58Serine/threonine-protein kinase 25 OS=Bos taurus G... [more]
STE20_EMENI2.451e-1832.16Serine/threonine-protein kinase ste20 OS=Emericell... [more]
MP2K6_HUMAN2.451e-1832.37Dual specificity mitogen-activated protein kinase ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_60H05_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-60H05-O10-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675252 ID=CX675252; Name=CX675252; organism=Citrus sinensis; type=EST; length=819bp
CAACAGCGAAAAAGTTCACCTTAAATTATCATGGCCGGGCTGGAGGAATT
AAAAAAGAAGCTTGCACCATTGTTTGATGCTGAAAAAGGTTTTTCTGCTG
GATCAACTCTTGACCCTTCGGATTCGTATATGCTGTCAGATGGTGGAACT
GTTAATTTATTAAGTAGATCATATGGAGTGTACAACTTTAATGAGCTCGG
ATTGCAAAAATGCACATCTTGGCTTGCTGATGAATCGGATCACAGCGAAA
AAACTTATCGATGTGCTTCTCATGAGATGAGGATTTTTGGAGCCATAGGT
AGTGGAGCAAGCAGCGTTGTTCAGAGAGCTGTCCACATTCCCACTCATAG
AATTATTGCCTTGAAGAAGATTAATATTTTTGAAAAGGAGAAAAGAAATC
AGCTTCTTACTGAGATAAGGACATTGTGCGAGGCTCCTTGTAACGAGGGT
CTTGTGGAGTTCCATGGTGCATTTTATATGCCAGACTCGGGGCAAATAAG
CATAGCTTTGGAGTACATGGATGGTGGATCTTTGGCGGATATCTTACGAA
TGCAAAAAAGTATACCAGAACCAATTCTTTCATCAATGTTTAAAAAGCTT
CTACAGGGATTAAGTTACTTACATGGAGTCAGACATTTAGTTCATAGAGA
CATTAAGCCAGCAAATCTTCTTGTAAATCTCANAGGGCGGCCGAAAATTA
CAGATTTTGGTATAAGTGCTGGCCTGNAGAATTCAATAGCAATGTGTGCT
ACTTTTGTCGGAACTGTTACATACATGTCACCTGAAAGAATTCGAAATGA
GAGCTACTCTTATCCTGCT
back to top