CK937093
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937093 vs. ExPASy Swiss-Prot
Match: YCF4_SORBI (Photosystem I assembly protein ycf4 OS=Sorghum bicolor GN=ycf4 PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.809e-30 Identity = 66/85 (77.65%), Postives = 73/85 (85.88%), Query Frame = 2 Query: 344 IVCIFRWGFPGKNRRIFLRFLMKDIQSIRIEVKEGIYARRVLYIESRGLGAIPLNRTDEN-LTPREIEQKAAELAYFLRVPIEGF 595 IVCIFRWGFPG RRIFL+FL++DIQSIRI+VKEG+Y RR+LY+E RG G IPL RTDE TPREIEQKAAELAYFL VPIE F Sbjct: 101 IVCIFRWGFPGIKRRIFLQFLVRDIQSIRIQVKEGLYPRRILYMEIRGQGVIPLTRTDEKFFTPREIEQKAAELAYFLGVPIEVF 185
BLAST of CK937093 vs. ExPASy Swiss-Prot
Match: YCF4_LOLPR (Photosystem I assembly protein ycf4 OS=Lolium perenne GN=ycf4 PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.792e-30 Identity = 65/85 (76.47%), Postives = 73/85 (85.88%), Query Frame = 2 Query: 344 IVCIFRWGFPGKNRRIFLRFLMKDIQSIRIEVKEGIYARRVLYIESRGLGAIPLNRTDEN-LTPREIEQKAAELAYFLRVPIEGF 595 IVCIFRWGFPG RR+FL+FLM+DIQSIRI+VKEG+ RR+LY+E RG G IPL RTDE TPRE+EQKAAELAYFLRVPIE F Sbjct: 101 IVCIFRWGFPGIKRRVFLQFLMRDIQSIRIQVKEGLSPRRILYMEIRGQGVIPLTRTDEKFFTPREMEQKAAELAYFLRVPIEVF 185
BLAST of CK937093 vs. ExPASy Swiss-Prot
Match: YCF4_BRAOL (Photosystem I assembly protein ycf4 OS=Brassica oleracea GN=ycf4 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.298e-29 Identity = 69/85 (81.18%), Postives = 72/85 (84.71%), Query Frame = 2 Query: 344 IVCIFRWGFPGKNRRIFLRFLMKDIQSIRIEVKEGIYARRVLYIESRGLGAIPLNRTDENLTP-REIEQKAAELAYFLRVPIEGF 595 IV IFRWGFPGK+RRI LRFLMKDIQS R EVKEG+ ARRV Y+E RG GAIPL RTDEN T REIEQKAAELAYFLRVPIE F Sbjct: 101 IVRIFRWGFPGKSRRIVLRFLMKDIQSDRTEVKEGVSARRVPYMEIRGQGAIPLIRTDENFTTRREIEQKAAELAYFLRVPIEVF 185
BLAST of CK937093 vs. ExPASy Swiss-Prot
Match: YCF4_CYCTA (Photosystem I assembly protein ycf4 OS=Cycas taitungensis GN=ycf4 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.434e-28 Identity = 61/84 (72.62%), Postives = 72/84 (85.71%), Query Frame = 2 Query: 344 IVCIFRWGFPGKNRRIFLRFLMKDIQSIRIEVKEGIYARRVLYIESRGLGAIPLNRTDENLTPREIEQKAAELAYFLRVPIEGF 595 IVC+FRWGFPG+NRR FLRFLMKDIQ+I++EV+EG+Y RRVLY+E +G IPL RT ENLT RE+EQKAAELA FLR+ IE F Sbjct: 101 IVCLFRWGFPGRNRRTFLRFLMKDIQAIKMEVQEGLYPRRVLYMEIKGQRDIPLARTGENLTLREMEQKAAELARFLRISIEVF 184
BLAST of CK937093 vs. ExPASy Swiss-Prot
Match: YCF4_CUSGR (Photosystem I assembly protein ycf4 OS=Cuscuta gronovii GN=ycf4 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.704e-27 Identity = 60/82 (73.17%), Postives = 69/82 (84.15%), Query Frame = 2 Query: 344 IVCIFRWGFPGKNRRIFLRFLMKDIQSIRIEVKEGIYARRVLYIESRGLGAIPLNRTDENLTPREIEQKAAELAYFLRVPIE 589 ++CIFRW FPG+NRR+ LRF MKDI+SIRIEVKEG Y RR+LY++ RG AIPL RTDE LTP EIE+KAAELA FL VPIE Sbjct: 93 VICIFRWVFPGRNRRLLLRFFMKDIRSIRIEVKEGFYTRRLLYMDIRGQKAIPLTRTDEVLTPVEIEKKAAELASFLCVPIE 174
BLAST of CK937093 vs. ExPASy Swiss-Prot
Match: YCF4_CUSOB (Photosystem I assembly protein ycf4 OS=Cuscuta obtusiflora GN=ycf4 PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.226e-27 Identity = 60/82 (73.17%), Postives = 68/82 (82.93%), Query Frame = 2 Query: 344 IVCIFRWGFPGKNRRIFLRFLMKDIQSIRIEVKEGIYARRVLYIESRGLGAIPLNRTDENLTPREIEQKAAELAYFLRVPIE 589 ++CIFRW FPG+NRR+ LRF MKDI+SIRIEVKEG Y RRVLY++ RG IPL RTDE LTP EIE+KAAELA FL VPIE Sbjct: 93 VICIFRWVFPGRNRRLLLRFFMKDIRSIRIEVKEGFYTRRVLYMDIRGQKGIPLTRTDEVLTPVEIEKKAAELASFLCVPIE 174
BLAST of CK937093 vs. ExPASy Swiss-Prot
Match: YCF4_PINTH (Photosystem I assembly protein ycf4 OS=Pinus thunbergii GN=ycf4 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.482e-26 Identity = 59/84 (70.24%), Postives = 68/84 (80.95%), Query Frame = 2 Query: 344 IVCIFRWGFPGKNRRIFLRFLMKDIQSIRIEVKEGIYARRVLYIESRGLGAIPLNRTDENLTPREIEQKAAELAYFLRVPIEGF 595 IVC+FRWGFPG NRRIF RFLMKDIQ I++E++EGI RRVLY+E +G IPL RT +N+ REIEQKAAE A FLRV IEGF Sbjct: 101 IVCLFRWGFPGINRRIFPRFLMKDIQMIKMEIQEGISPRRVLYMEIKGRQDIPLTRTGDNVNLREIEQKAAESARFLRVSIEGF 184
BLAST of CK937093 vs. ExPASy Swiss-Prot
Match: YCF4_PINKO (Photosystem I assembly protein ycf4 OS=Pinus koraiensis GN=ycf4 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 7.160e-26 Identity = 59/84 (70.24%), Postives = 67/84 (79.76%), Query Frame = 2 Query: 344 IVCIFRWGFPGKNRRIFLRFLMKDIQSIRIEVKEGIYARRVLYIESRGLGAIPLNRTDENLTPREIEQKAAELAYFLRVPIEGF 595 IVC+FRWGFPG NRRIF RFLMKDIQ I+ E++EGI RRVLY+E +G IPL RT +N+ REIEQKAAE A FLRV IEGF Sbjct: 101 IVCLFRWGFPGINRRIFSRFLMKDIQMIKTEIQEGISPRRVLYMEIKGRQDIPLTRTGDNVNLREIEQKAAESARFLRVSIEGF 184
BLAST of CK937093 vs. ExPASy Swiss-Prot
Match: YCF4_ANGEV (Photosystem I assembly protein ycf4 OS=Angiopteris evecta GN=ycf4 PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.303e-24 Identity = 54/84 (64.29%), Postives = 68/84 (80.95%), Query Frame = 2 Query: 344 IVCIFRWGFPGKNRRIFLRFLMKDIQSIRIEVKEGIYARRVLYIESRGLGAIPLNRTDENLTPREIEQKAAELAYFLRVPIEGF 595 IV +FRWGFPG+NRRI +RF++KDIQ+IR+E++EG RRVLY+ +G +PL R DE LT RE+E+KAAELA FLRV IEGF Sbjct: 101 IVYLFRWGFPGENRRICIRFMIKDIQAIRMEIQEGFSPRRVLYLRIKGQQDVPLTRLDEELTLREMEEKAAELARFLRVSIEGF 184
BLAST of CK937093 vs. ExPASy Swiss-Prot
Match: YCF4_MARPO (Photosystem I assembly protein ycf4 OS=Marchantia polymorpha GN=ycf4 PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.008e-24 Identity = 56/83 (67.47%), Postives = 68/83 (81.93%), Query Frame = 2 Query: 344 IVCIFRWGFPGKNRRIFLRFLMKDIQSIRIEVKEGIYARRVLYIESRGLGAIPLNRTDENLTPREIEQKAAELAYFLRVPIEG 592 I IFRWGFPGKNRRIF++FL+KDIQSIR+EV+EG +RRVLYI+ +G IPL+R +E T RE+E KAAELA FL+V IEG Sbjct: 101 IFSIFRWGFPGKNRRIFIQFLIKDIQSIRMEVQEGFLSRRVLYIKIKGQPDIPLSRIEEYFTLREMEDKAAELARFLKVSIEG 183 The following BLAST results are available for this feature:
BLAST of CK937093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 123
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937093 ID=CK937093; Name=CK937093; organism=Citrus sinensis; type=EST; length=825bpback to top |