CK937025

Overview
NameCK937025
Unique NameCK937025
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length745
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937025 vs. ExPASy Swiss-Prot
Match: XTH15_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 15 OS=Arabidopsis thaliana GN=XTH15 PE=1 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.049e-62
Identity = 108/191 (56.54%), Postives = 142/191 (74.35%), Query Frame = 3
Query:  177 ATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAY 743
            + F ++F +TW D   +   GG  + L LDQ SG GF SK++YLFGR+ M++KLV G+SAGTVTA+Y++S      DE+DFEFLGN TG+PY + TN++A GKGDREQ+  LWFDP  ++H Y+I+W   HI+F VD++PIRV+ N+ +   PFP +QPM +YS+LW ADDWATRGGL K DWSKAPF AY
Sbjct:   26 SNFFDEFDLTWGDHRGKIFNGGNMLSLSLDQVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQGAT-HDEIDFEFLGNETGKPYVLHTNVFAQGKGDREQQFYLWFDPTKNFHTYSIVWRPQHIIFLVDNLPIRVFNNAEKLGVPFPKSQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAY 215          
BLAST of CK937025 vs. ExPASy Swiss-Prot
Match: XTH25_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 SV=2)

HSP 1 Score: 238.424 bits (607), Expect = 3.053e-62
Identity = 108/189 (57.14%), Postives = 139/189 (73.54%), Query Frame = 3
Query:  180 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYA 740
            TF  +F +TW D   + +  G  + L LD+ SG GF +K++YLFG++ M++KLVPG+SAGTVTA+Y+ S  +   DE+DFEFLGN TG PYT+ TN+Y  GKGDREQ+ +LWFDP AD+H Y++LWN HHIVF VDD+P+R +KN       +P  QPM +YS+LW AD WATRGGL K DWSKAPF A
Sbjct:   29 TFDTEFDITWGDGRGKVLNNGELLTLSLDRASGSGFQTKKEYLFGKIDMQLKLVPGNSAGTVTAYYLKSKGDTW-DEIDFEFLGNLTGDPYTMHTNVYTQGKGDREQQFHLWFDPTADFHTYSVLWNPHHIVFMVDDIPVREFKNLQHMGIQYPKLQPMRLYSSLWNADQWATRGGLVKTDWSKAPFTA 216          
BLAST of CK937025 vs. ExPASy Swiss-Prot
Match: XTH16_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 16 OS=Arabidopsis thaliana GN=XTH16 PE=2 SV=2)

HSP 1 Score: 237.654 bits (605), Expect = 5.208e-62
Identity = 107/190 (56.32%), Postives = 143/190 (75.26%), Query Frame = 3
Query:  180 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAY 743
            +F E+F +TW +   +   GG+ + L LD+ SG GF SK++YLFGR+ M++KLV G+SAGTVTA+Y++S      DE+DFEFLGN TG+PY + TN++A GKG+REQ+  LWFDP  ++H Y+++W   HI+F VD+VPIRV+ N+ +   PFP NQPM +YS+LW ADDWATRGGL K DWSKAPF AY
Sbjct:   26 SFNEEFDLTWGEHRGKIFSGGKMLSLSLDRVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSEGPT-HDEIDFEFLGNETGKPYVLHTNVFAQGKGNREQQFYLWFDPTKNFHTYSLVWRPQHIIFMVDNVPIRVFNNAEQLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWSKAPFTAY 214          
BLAST of CK937025 vs. ExPASy Swiss-Prot
Match: XTH_BRAOB (Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis GN=XET16A PE=1 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 6.802e-62
Identity = 110/188 (58.51%), Postives = 141/188 (75.00%), Query Frame = 3
Query:  183 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYA 740
            F  ++  TW+  H +Q+ GG  +QL+LD+ +G GF SK  YLFG  SM IKL  GD+AG VTAFY++S T N  DE+DFEFLGNRTGQP  +QTN++  GKG+REQR+ LWFDP+  YH Y++LWN + IVF+VD++PIRV+KN+      FP NQPM +YS+LW ADDWATRGGLEK +W+ APF A
Sbjct:   34 FGRNYVPTWAFDHQKQLNGGSELQLILDKYTGTGFQSKGSYLFGHFSMHIKLPAGDTAGVVTAFYLSS-TNNEHDEIDFEFLGNRTGQPVILQTNVFTGGKGNREQRIYLWFDPSKAYHTYSVLWNLYQIVFFVDNIPIRVFKNAKDLGVRFPFNQPMKLYSSLWNADDWATRGGLEKTNWANAPFIA 220          
BLAST of CK937025 vs. ExPASy Swiss-Prot
Match: XTH4_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 4 OS=Arabidopsis thaliana GN=XTH4 PE=1 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.585e-61
Identity = 110/188 (58.51%), Postives = 139/188 (73.94%), Query Frame = 3
Query:  183 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYA 740
            F  ++  TW+  H +Q  GG  +QL+LD+ +G GF SK  YLFG  SM IKL  GD+AG VTAFY++S T N  DE+DFEFLGNRTGQP  +QTN++  GKG+REQR+ LWFDP+  YH Y+ILWN + IVF+VD++PIR +KN+      FP NQPM +YS+LW ADDWATRGGLEK +W+ APF A
Sbjct:   35 FGRNYVPTWAFDHQKQFNGGSELQLILDKYTGTGFQSKGSYLFGHFSMHIKLPAGDTAGVVTAFYLSS-TNNEHDEIDFEFLGNRTGQPAILQTNVFTGGKGNREQRIYLWFDPSKAYHTYSILWNMYQIVFFVDNIPIRTFKNAKDLGVRFPFNQPMKLYSSLWNADDWATRGGLEKTNWANAPFVA 221          
BLAST of CK937025 vs. ExPASy Swiss-Prot
Match: BRU1_SOYBN (Brassinosteroid-regulated protein BRU1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 4.409e-61
Identity = 107/190 (56.32%), Postives = 139/190 (73.16%), Query Frame = 3
Query:  180 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAY 743
            +F +DF +TW     +   GG+ + L LD+ SG GF SK++YLFGR+ M++KLV G+SAGTVTA+Y++S      DE+DFEFLGN +G PY + TNI+  GKG+REQ+  LWFDP  ++H Y+I+W   HI+F VD+ PIRV+KN+     PFP NQPM +YS+LW ADDWATRGGL K DWSKAPF AY
Sbjct:   31 SFYQDFDLTWGGDRAKIFNGGQLLSLSLDKVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQGPT-HDEIDFEFLGNLSGDPYILHTNIFTQGKGNREQQFYLWFDPTRNFHTYSIIWKPQHIIFLVDNTPIRVFKNAEPLGVPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAY 219          
BLAST of CK937025 vs. ExPASy Swiss-Prot
Match: XTH14_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 14 OS=Arabidopsis thaliana GN=XTH14 PE=1 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 5.758e-61
Identity = 106/188 (56.38%), Postives = 136/188 (72.34%), Query Frame = 3
Query:  183 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYA 740
            F E F +TW +      E G+ +   LD+ SG GF SK++YLFG++ MK+KLV G+SAGTVTA+Y++S      DE+DFEFLGNRTG PYT+ TN++  GKGDRE +  LWFDP AD+H YT+ WN  +I+F VD +PIRV+KN+ +    +P NQPM +YS+LWEADDWAT GG  KIDWS APF A
Sbjct:   30 FYESFDITWGNGRANIFENGQLLTCTLDKVSGSGFQSKKEYLFGKIDMKLKLVAGNSAGTVTAYYLSSKG-TAWDEIDFEFLGNRTGHPYTIHTNVFTGGKGDREMQFRLWFDPTADFHTYTVHWNPVNIIFLVDGIPIRVFKNNEKNGVAYPKNQPMRIYSSLWEADDWATEGGRVKIDWSNAPFKA 216          
BLAST of CK937025 vs. ExPASy Swiss-Prot
Match: XTH12_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 12 OS=Arabidopsis thaliana GN=XTH12 PE=2 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 6.367e-60
Identity = 104/189 (55.03%), Postives = 137/189 (72.49%), Query Frame = 3
Query:  180 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYA 740
            +F + F +TW        E G+ +   LD+ SG GF SK++YLFG++ MKIKLVPG+SAGTVTA+Y++S  E   DE+DFEFLGN TGQPY + TN++  GKG+RE +  LWFDP AD+H YT+LWN  +I+F VD +PIRV+KN  +    +P +QPM +YS+LWEADDWAT+GG  K DW+ APF A
Sbjct:   26 SFYDSFDITWGAGRANIFESGQLLTCTLDKTSGSGFQSKKEYLFGKIDMKIKLVPGNSAGTVTAYYLSSKGETW-DEIDFEFLGNVTGQPYVIHTNVFTGGKGNREMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKNNEANGVAYPKSQPMKIYSSLWEADDWATQGGKVKTDWTNAPFSA 213          
BLAST of CK937025 vs. ExPASy Swiss-Prot
Match: XTH22_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana GN=XTH22 PE=1 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.419e-59
Identity = 109/190 (57.37%), Postives = 135/190 (71.05%), Query Frame = 3
Query:  177 ATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYA 740
            A F  D ++TW D   +    G  + L LD++SG GF SK +YLFG+VSM++KLVPG+SAGTVT  Y+ S      DE+DFEFLGN +G+PYT+ TN+Y  GKGD+EQ+  LWFDP A++H YTILWN   I+F VD  PIR +KN  S    FP N+PM +YS+LW ADDWATRGGL K DWSKAPF A
Sbjct:   21 ANFQRDVEITWGDGRGQIKNNGELLTLSLDKSSGSGFQSKNEYLFGKVSMQMKLVPGNSAGTVTTLYLKS-PGTTWDEIDFEFLGNSSGEPYTLHTNVYTQGKGDKEQQFKLWFDPTANFHTYTILWNPQRIIFTVDGTPIREFKNMESLGTLFPKNKPMRMYSSLWNADDWATRGGLVKTDWSKAPFTA 209          
BLAST of CK937025 vs. ExPASy Swiss-Prot
Match: XTH13_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 13 OS=Arabidopsis thaliana GN=XTH13 PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 7.039e-59
Identity = 102/189 (53.97%), Postives = 139/189 (73.54%), Query Frame = 3
Query:  180 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYA 740
            +F ++F +TW +     +E G+ +   LD+ SG GF SK++YLFG++ MK+KLV G+SAGTVTA+Y++S  E   DE+DFEFLGN TGQPY + TN++  GKG+RE +  LWFDP AD+H YT+LWN  +I+F VD +PIRV+KN  +    +P +QPM +YS+LWEADDWAT+GG  K DW+ APF A
Sbjct:   25 SFYDNFDITWGNGRANIVESGQLLTCTLDKISGSGFQSKKEYLFGKIDMKMKLVAGNSAGTVTAYYLSSKGETW-DEIDFEFLGNVTGQPYVLHTNVFTGGKGNREMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKNNEANGVAYPKSQPMKIYSSLWEADDWATQGGKVKTDWTNAPFSA 212          
The following BLAST results are available for this feature:
BLAST of CK937025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
XTH15_ARATH1.049e-6256.54Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH25_ARATH3.053e-6257.14Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH16_ARATH5.208e-6256.32Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_BRAOB6.802e-6258.51Xyloglucan endotransglucosylase/hydrolase OS=Brass... [more]
XTH4_ARATH2.585e-6158.51Xyloglucan endotransglucosylase/hydrolase protein ... [more]
BRU1_SOYBN4.409e-6156.32Brassinosteroid-regulated protein BRU1 OS=Glycine ... [more]
XTH14_ARATH5.758e-6156.38Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH12_ARATH6.367e-6055.03Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH22_ARATH2.419e-5957.37Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH13_ARATH7.039e-5953.97Putative xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004515_C06 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IIF_C06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937025 ID=CK937025; Name=CK937025; organism=Citrus sinensis; type=EST; length=745bp
GGGGACACTCGGNNNACATAACCACAACATATAATTAAAGTTCTCTTTCT
AATTAGTAACAGATAATATTTTATTGTACGGCTTGTTTTACAGCTATGGC
TATCCTAAGAAATGCAATAGCATTATTTGTGTTGCTTTACTGTCTTGTAT
CCTGCTCTTGCGTTTTAGGGCGACCGGCTACTTTTCTTGAGGATTTTAAA
GTCACATGGTCCGATGCCCATCTCAGGCAAATCGAGGGAGGGAGGGCCAT
CCAGCTAGTTCTAGACCAAAATTCAGGATGTGGGTTTGCTTCCAAAAGGC
AGTACTTGTTCGGGCGTGTAAGCATGAAGATCAAGCTCGTTCCTGGAGAC
TCTGCTGGAACTGTCACTGCATTTTATATGAATTCCAACACCGAAAATGT
GAGAGACGAGCTTGATTTTGAGTTCCTGGGAAACCGAACGGGTCAGCCTT
ACACGGTCCAGACCAATATCTATGCAAATGGAAAAGGCGATAGAGAACAG
AGAGTGAACCTCTGGTTTGACCCTGCTGCAGATTATCACCTTTACACTAT
TCTCTGGAACCATCACCATATTGTCTTCTATGTGGATGATGTGCCCATCA
GGGTTTACAAAAACAGTGGAAGGGCTCCATTTCCAATGAACCAACCCATG
GGGGTGTATTCGACGCTGTGGGAAGCAGATGACTGGGCAACAAGAGGTGG
TCTAGAGAAAATAGATTGGAGCAAAGCTCCTTTTTATGCTTATTA
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