CK936995

Overview
NameCK936995
Unique NameCK936995
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length757
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936995 vs. ExPASy Swiss-Prot
Match: XTH8_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 8 OS=Arabidopsis thaliana GN=XTH8 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.986e-36
Identity = 80/205 (39.02%), Postives = 122/205 (59.51%), Query Frame = 2
Query:  152 VFTFANASSSPAFNLTTISFDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYRLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSTAMGGD--FPS-KPMSLYTTIWDASNWAISGGKAKVN 757
            +F  A  +SS      T SF++ ++ ++ + +   S DG+   L L+  +G GF +  +Y  G+FS  +KL    +AG+  A+Y  + +      DE+DFEFLGN  G+P+  QTN Y NG+    RE R+ LWFDPTK +H YSILW ++ ++F+VD VPIR    S  +  +  FP+ KPM L+++IW+A +WA  GG  K +
Sbjct:    6 LFMTALMASSSIAATPTQSFEDNFNIMWSENHFTTSDDGEIWNLSLDNDTGCGFQTKHMYRFGWFSMKLKLVGGDSAGVVTAYYMCSENGAGPERDEIDFEFLGNRTGQPYIIQTNVYKNGT--GNREMRHSLWFDPTKDYHTYSILWNNHQLVFFVDRVPIRVYKNSDKVPNNDFFPNQKPMYLFSSIWNADDWATRGGLEKTD 208          
BLAST of CK936995 vs. ExPASy Swiss-Prot
Match: XTH6_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana GN=XTH6 PE=2 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 2.986e-36
Identity = 79/200 (39.50%), Postives = 120/200 (60.00%), Query Frame = 2
Query:  161 FANASSSPAFNLTTISFDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYRLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSTAMGGDFP-SKPMSLYTTIWDASNWAISGGKAKVN 757
            F   S+ PA      +F E +   + + ++ +  DGK ++L+L++ +G GF S + Y  G  S  IKL    +AG   AFY ++        DELDFEFLGN +G+P+  QTN + +G     RE+R  LWFDP+  +H Y+ILW+  +I+FYVD+VPIRE   + A    +P S+PM +Y+T+W+A +WA  GG  K++
Sbjct:   25 FIRVSARPA------TFVEDFKAAWSESHIRQMEDGKAIQLVLDQSTGCGFASKRKYLFGRVSMKIKLIPGDSAGTVTAFYMNSDTA--TVRDELDFEFLGNRSGQPYSVQTNIFAHGKG--DREQRVNLWFDPSMDYHTYTILWSHKHIVFYVDDVPIREYKNNEAKNIAYPTSQPMGVYSTLWEADDWATRGGLEKID 214          
BLAST of CK936995 vs. ExPASy Swiss-Prot
Match: XTH_TOBAC (Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 5.093e-36
Identity = 78/186 (41.94%), Postives = 111/186 (59.68%), Query Frame = 2
Query:  203 ISFDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYRLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSTAMGGDFP-SKPMSLYTTIWDASNWAISGGKAKVN 757
            + F + Y   +   ++     G  V L+L+R SG+GF S K Y  G FS  +KL    +AG+  AFY S+ +     HDE+DFEFLGN  G+P+  QTN +  G     RE+R  LWFDPTK +H YS+LW +  I+ +VD+VPIR    S  +G  FP ++PM +Y+++WDA +WA  GG  K +
Sbjct:   30 VPFWKNYEPSWASHHIKYLSGGSTVDLVLDRSSGAGFQSKKSYLFGHFSMKLKLVGGDSAGVVTAFYLSSNNA---EHDEIDFEFLGNRTGQPYILQTNVFTGGKG--DREQRIYLWFDPTKGYHSYSVLWNTFQIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTD 210          
BLAST of CK936995 vs. ExPASy Swiss-Prot
Match: XTH4_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 4 OS=Arabidopsis thaliana GN=XTH4 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.652e-36
Identity = 75/165 (45.45%), Postives = 105/165 (63.64%), Query Frame = 2
Query:  266 GKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYRLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSTAMGGDFP-SKPMSLYTTIWDASNWAISGGKAKVN 757
            G  ++L+L++++G+GF S   Y  G FS  IKLP+  TAG+  AFY S+ +     HDE+DFEFLGN  G+P   QTN +  G     RE+R  LWFDP+K +H YSILW    I+F+VD +PIR    +  +G  FP ++PM LY+++W+A +WA  GG  K N
Sbjct:   54 GSELQLILDKYTGTGFQSKGSYLFGHFSMHIKLPAGDTAGVVTAFYLSSTN---NEHDEIDFEFLGNRTGQPAILQTNVFTGGKG--NREQRIYLWFDPSKAYHTYSILWNMYQIVFFVDNIPIRTFKNAKDLGVRFPFNQPMKLYSSLWNADDWATRGGLEKTN 213          
BLAST of CK936995 vs. ExPASy Swiss-Prot
Match: XTH5_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.135e-35
Identity = 74/165 (44.85%), Postives = 105/165 (63.64%), Query Frame = 2
Query:  266 GKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYRLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSTAMGGDFP-SKPMSLYTTIWDASNWAISGGKAKVN 757
            G  V L+L++++G+GF S   Y  G FS  IK+ +  +AG   AFY S+ +     HDE+DFEFLGN  G+P+  QTN +  G  A  RE+R  LWFDP+K +H YS+LW    I+F+VD+VPIR    S  +G  FP ++PM +Y+++W+A +WA  GG  K N
Sbjct:   51 GSEVHLVLDKYTGTGFQSKGSYLFGHFSMHIKMVAGDSAGTVTAFYLSSQN---SEHDEIDFEFLGNRTGQPYILQTNVFTGG--AGNREQRINLWFDPSKDYHSYSVLWNMYQIVFFVDDVPIRVFKNSKDVGVKFPFNQPMKIYSSLWNADDWATRGGLEKTN 210          
BLAST of CK936995 vs. ExPASy Swiss-Prot
Match: XTH_BRAOB (Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis GN=XET16A PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.482e-35
Identity = 74/165 (44.85%), Postives = 105/165 (63.64%), Query Frame = 2
Query:  266 GKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYRLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSTAMGGDFP-SKPMSLYTTIWDASNWAISGGKAKVN 757
            G  ++L+L++++G+GF S   Y  G FS  IKLP+  TAG+  AFY S+ +     HDE+DFEFLGN  G+P   QTN +  G     RE+R  LWFDP+K +H YS+LW    I+F+VD +PIR    +  +G  FP ++PM LY+++W+A +WA  GG  K N
Sbjct:   53 GSELQLILDKYTGTGFQSKGSYLFGHFSMHIKLPAGDTAGVVTAFYLSSTN---NEHDEIDFEFLGNRTGQPVILQTNVFTGGKG--NREQRIYLWFDPSKAYHTYSVLWNLYQIVFFVDNIPIRVFKNAKDLGVRFPFNQPMKLYSSLWNADDWATRGGLEKTN 212          
BLAST of CK936995 vs. ExPASy Swiss-Prot
Match: XTH_SOYBN (Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.935e-35
Identity = 75/165 (45.45%), Postives = 104/165 (63.03%), Query Frame = 2
Query:  266 GKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYRLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSTAMGGDFP-SKPMSLYTTIWDASNWAISGGKAKVN 757
            G +++L L++++G+GF S   Y  G FS  IK+    +AG   AFY S+ +     HDE+DFEFLGN  G+P+  QTN +  G     RE+R  LWFDPTK++HRYSILW    I+F+VDEVPIR    S  +G  FP  +PM +Y ++W+A +WA  GG  K +
Sbjct:   52 GSDIQLHLDKYTGTGFQSKGSYLFGHFSMYIKMVPGDSAGTVTAFYLSSQNA---EHDEIDFEFLGNRTGQPYILQTNVFTGGKG--DREQRIYLWFDPTKEYHRYSILWNLYQIVFFVDEVPIRVFKNSKDLGVKFPFDQPMKIYNSLWNADDWATRGGLEKTD 211          
BLAST of CK936995 vs. ExPASy Swiss-Prot
Match: XTH1_SOLLC (Probable xyloglucan endotransglucosylase/hydrolase 1 OS=Solanum lycopersicum GN=XTH1 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.935e-35
Identity = 75/165 (45.45%), Postives = 103/165 (62.42%), Query Frame = 2
Query:  266 GKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYRLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSTAMGGDFP-SKPMSLYTTIWDASNWAISGGKAKVN 757
            G    L+L+R SG+GF S K Y  G FS  ++L    +AG+  AFY S+ +     HDE+DFEFLGN  G+P+  QTN +  G     RE+R  LWFDPTK +H YS+LW +  I+ +VD+VPIR    S  +G  FP ++PM +Y+++WDA +WA  GG  K N
Sbjct:   52 GTTTDLILDRSSGAGFQSKKSYLFGHFSMKMRLVGGDSAGVVTAFYLSSNNA---EHDEIDFEFLGNRTGQPYILQTNVFTGGKG--NREQRIYLWFDPTKGYHSYSVLWNTYLIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTN 211          
BLAST of CK936995 vs. ExPASy Swiss-Prot
Match: XTHA_PHAAN (Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.528e-35
Identity = 82/200 (41.00%), Postives = 115/200 (57.50%), Query Frame = 2
Query:  170 ASSSPAFNLTT---ISFDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYRLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSTAMGGDFP-SKPMSLYTTIWDASNWAISGGKAKVN 757
            AS+S A N  T   + F   Y   +   ++     G  ++L L++++G+GF S   Y  G FS  IKL    +AG   AFY S+ +     HDE+DFEFLGN  G+P+  QTN +  G     RE+R  LWFDPT Q+HRYS+LW    I+FYVD+ PIR    S  +G  FP ++PM +Y ++W+A +WA  GG  K +
Sbjct:   15 ASASFAANPRTPIDVPFGRNYVPTWAFDHIKYLNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMYIKLVPGDSAGTVTAFYLSSTNA---EHDEIDFEFLGNRTGQPYILQTNVFTGGKG--DREQRIYLWFDPTTQYHRYSVLWNMYQIVFYVDDYPIRVFKNSNDLGVKFPFNQPMKIYNSLWNADDWATRGGLEKTD 209          
BLAST of CK936995 vs. ExPASy Swiss-Prot
Match: XTH16_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 16 OS=Arabidopsis thaliana GN=XTH16 PE=2 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 4.312e-35
Identity = 78/185 (42.16%), Postives = 110/185 (59.46%), Query Frame = 2
Query:  206 SFDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYRLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSTAMGGDFP-SKPMSLYTTIWDASNWAISGGKAKVN 757
            SF+E +   +G+        GK + L L+R SGSGF S K Y  G     +KL + ++AG   A+Y S+      THDE+DFEFLGN  GKP+   TN +  G     RE+++ LWFDPTK FH YS++W   +IIF VD VPIR    +  +G  FP ++PM +Y+++W+A +WA  GG  K +
Sbjct:   26 SFNEEFDLTWGEHRGKIFSGGKMLSLSLDRVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSEG---PTHDEIDFEFLGNETGKPYVLHTNVFAQGKG--NREQQFYLWFDPTKNFHTYSLVWRPQHIIFMVDNVPIRVFNNAEQLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTD 205          
The following BLAST results are available for this feature:
BLAST of CK936995 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
XTH8_ARATH2.986e-3639.02Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH6_ARATH2.986e-3639.50Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_TOBAC5.093e-3641.94Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH4_ARATH6.652e-3645.45Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH5_ARATH1.135e-3544.85Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_BRAOB1.482e-3544.85Xyloglucan endotransglucosylase/hydrolase OS=Brass... [more]
XTH_SOYBN1.935e-3545.45Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH1_SOLLC1.935e-3545.45Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHA_PHAAN2.528e-3541.00Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH16_ARATH4.312e-3542.16Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004515_E11 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IIF_E11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936995 ID=CK936995; Name=CK936995; organism=Citrus sinensis; type=EST; length=757bp
GGGGAGAAACCAACACACAGCGTAACAAATTTTTATTTATAGAAACCAAA
AAATAATTATGGATTGGTTTCTTTGCTCTCAATCAAAAAAATCATCAGCA
CCCTTCACTCTAATTCTAATTCTGTTGTGTTGCTGCTCATCACCATCACT
TGTGTTCACATTCGCAAACGCATCATCATCACCTGCTTTCAACCTCACCA
CCATCTCTTTCGATGAAGGCTACTCTCATCTCTTCGGCGACGGCAATCTC
ATTCGCTCCCCCGACGGCAAGAACGTTCGTCTCCTCCTCAACCGCTTCTC
CGGGTCCGGTTTTGTTTCGTCAAAATTGTACAATCACGGGTTCTTTAGCG
CGATGATCAAGTTGCCATCGGATCACACGGCTGGCTTATGTGTTGCATTC
TATACATCAAATGGAGACGTGTTCCCAAAAACACACGACGAATTAGACTT
TGAGTTTCTAGGAAACGTGGCTGGAAAACCGTGGAGGTTCCAAACAAATT
TCTATGGAAATGGGAGCACGGCACGCGGCAGGGAAGAGAGATACCGGCTT
TGGTTTGATCCCACGAAGCAATTTCATAGATATAGCATTCTTTGGACAAG
CAACAACATTATATTCTATGTGGATGAAGTACCAATAAGGGAAGTCGTGC
GCTCAACGGCAATGGGTGGAGATTTCCCATCAAAGCCAATGTCATTGTAC
ACAACAATTTGGGATGCCTCAAATTGGGCCATATCAGGTGGCAAAGCCAA
AGTTAAT
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