CK936995

Overview
NameCK936995
Unique NameCK936995
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length757
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936995 vs. ExPASy Swiss-Prot
Match: XTH15_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 15 OS=Arabidopsis thaliana GN=XTH15 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 9.606e-35
Identity = 80/203 (39.41%), Postives = 117/203 (57.64%), Query Frame = 2
Query:  152 VFTFANASSSPAFNLTTISFDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYRLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSTAMGGDFP-SKPMSLYTTIWDASNWAISGGKAKVN 757
            V  F +A +S  F+   +++ +    +F  GN++         L L++ SGSGF S K Y  G     +KL + ++AG   A+Y S+      THDE+DFEFLGN  GKP+   TN +  G     RE+++ LWFDPTK FH YSI+W   +IIF VD +PIR    +  +G  FP S+PM +Y+++W+A +WA  GG  K +
Sbjct:   17 VTLFGSAYASNFFDEFDLTWGDHRGKIFNGGNMLS--------LSLDQVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQGA---THDEIDFEFLGNETGKPYVLHTNVFAQGKG--DREQQFYLWFDPTKNFHTYSIVWRPQHIIFLVDNLPIRVFNNAEKLGVPFPKSQPMRIYSSLWNADDWATRGGLVKTD 206          
BLAST of CK936995 vs. ExPASy Swiss-Prot
Match: XTH25_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 1.638e-34
Identity = 81/195 (41.54%), Postives = 112/195 (57.44%), Query Frame = 2
Query:  179 SPAFNLTTISFDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYT-SNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYRLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSTAMGGDFPS-KPMSLYTTIWDASNWAISGGKAKVN 757
            SP F  T   FD  +   +GDG      +G+ + L L+R SGSGF + K Y  G     +KL   ++AG   A+Y  S GD    T DE+DFEFLGN+ G P+   TN Y  G     RE+++ LWFDPT  FH YS+LW  ++I+F VD++P+RE      MG  +P  +PM LY+++W+A  WA  GG  K +
Sbjct:   23 SPVFAGT---FDTEFDITWGDGRGKVLNNGELLTLSLDRASGSGFQTKKEYLFGKIDMQLKLVPGNSAGTVTAYYLKSKGD----TWDEIDFEFLGNLTGDPYTMHTNVYTQGKG--DREQQFHLWFDPTADFHTYSVLWNPHHIVFMVDDIPVREFKNLQHMGIQYPKLQPMRLYSSLWNADQWATRGGLVKTD 208          
BLAST of CK936995 vs. ExPASy Swiss-Prot
Match: XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.650e-34
Identity = 75/186 (40.32%), Postives = 109/186 (58.60%), Query Frame = 2
Query:  203 ISFDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYRLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSTAMGGDFP-SKPMSLYTTIWDASNWAISGGKAKVN 757
            + FD+ Y   +   ++     G+ V+L L++ +G+GF +   Y  G FS  IKL    +AG   AFY S+ +     HDE+DFEFLGN  G+P+  QTN +  G     RE+R  LWFDPTK +H YS+LW    I F+VD+ PIR    S  +G  +P  +PM LY+++W+A +WA  GG+ K +
Sbjct:   30 VPFDKNYVPTWAQDHIHYVNGGREVQLSLDKTTGTGFQTRGSYLFGHFSMHIKLVGGDSAGTVTAFYLSSQN---SEHDEIDFEFLGNRTGQPYILQTNVFSGGKG--DREQRIYLWFDPTKDYHSYSVLWNLYMIAFFVDDTPIRVFKNSKDLGVRYPFDQPMKLYSSLWNADDWATRGGREKTD 210          
BLAST of CK936995 vs. ExPASy Swiss-Prot
Match: XTH18_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 18 OS=Arabidopsis thaliana GN=XTH18 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.226e-34
Identity = 78/186 (41.94%), Postives = 109/186 (58.60%), Query Frame = 2
Query:  206 SFDEGYSHLFGDGN-LIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYRLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSTAMGGDFPSK-PMSLYTTIWDASNWAISGGKAKVN 757
            SF +     +GDG   +R  DGK + L L++ SGSGF S++ + +G     +KL   ++AG    FY  +      T DE+DFEFLGN++G P+   TN Y  GS    +E+++ LWFDPT  FH Y I W    IIF VD +PIRE   S ++G  FP+K PM LY ++W+A +WA  GG  K +
Sbjct:   28 SFHKDVQIHWGDGRGKVRDRDGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKSPGT---TWDEIDFEFLGNLSGHPYTLHTNVYTKGSG--DKEQQFHLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKNSESIGVPFPTKQPMRLYASLWEAEHWATRGGLEKTD 208          
BLAST of CK936995 vs. ExPASy Swiss-Prot
Match: XTH13_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 13 OS=Arabidopsis thaliana GN=XTH13 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.062e-33
Identity = 76/190 (40.00%), Postives = 112/190 (58.95%), Query Frame = 2
Query:  191 NLTTISFDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYRLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSTAMGGDFP-SKPMSLYTTIWDASNWAISGGKAKVN 757
            +L+  SF + +   +G+G       G+ +   L++ SGSGF S K Y  G     +KL + ++AG   A+Y S+     +T DE+DFEFLGNV G+P+   TN +  G     RE ++ LWFDPT  FH Y++LW   NIIF VD +PIR    + A G  +P S+PM +Y+++W+A +WA  GGK K +
Sbjct:   20 SLSAGSFYDNFDITWGNGRANIVESGQLLTCTLDKISGSGFQSKKEYLFGKIDMKMKLVAGNSAGTVTAYYLSSKG---ETWDEIDFEFLGNVTGQPYVLHTNVFTGGKG--NREMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKNNEANGVAYPKSQPMKIYSSLWEADDWATQGGKVKTD 204          
BLAST of CK936995 vs. ExPASy Swiss-Prot
Match: XTH8_ORYSJ (Xyloglucan endotransglycosylase/hydrolase protein 8 OS=Oryza sativa subsp. japonica GN=XTH8 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.812e-33
Identity = 77/177 (43.50%), Postives = 104/177 (58.76%), Query Frame = 2
Query:  236 GDGNLIRSPDGKN--VRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYRLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSTAMGGDFP-SKPMSLYTTIWDASNWAISGGKAKVN 757
            GD   + S DGK   V L L+R SGSGF S   Y  G FS  +KL   ++AG   +FY S+G+     HDE+D EF+GN++G P+   TN + NG   +  E ++ LWFDPT  FH Y I+W   NIIF VD+VP+R   +   +   +P SKPM L+ T+WD S WA   G  K++
Sbjct:   38 GDHVRVVSDDGKTQQVALTLDRSSGSGFTSKDTYLFGEFSVQMKLVGGNSAGTVTSFYLSSGE--GDGHDEIDIEFMGNLSGNPYVMNTNVWANGDGKK--EHQFYLWFDPTADFHTYKIIWNPQNIIFQVDDVPVRTFKKYDDLA--YPQSKPMRLHATLWDGSYWATRHGDVKID 208          
BLAST of CK936995 vs. ExPASy Swiss-Prot
Match: XTH7_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 2.366e-33
Identity = 76/184 (41.30%), Postives = 107/184 (58.15%), Query Frame = 2
Query:  209 FDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYRLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSTAMGGDFPS-KPMSLYTTIWDASNWAISGGKAKVN 757
            F++ +   + D ++ +   G+ ++L L+  SG GF S K Y  G  S  IKL    +AG   AFY  N D      DELDFEFLGN +G+P+  QTN + +G     RE+R  LWFDP++ FH Y+I W    I+FYVD VPIR    + A    +P  +PM +Y+T+W+A +WA  GG  K+N
Sbjct:   34 FEDDFRIAWSDTHITQIDGGRAIQLKLDPSSGCGFASKKQYLFGRVSMKIKLIPGDSAGTVTAFYM-NSDT-DSVRDELDFEFLGNRSGQPYTVQTNVFAHGKG--DREQRVNLWFDPSRDFHEYAISWNHLRIVFYVDNVPIRVYKNNEARKVPYPRFQPMGVYSTLWEADDWATRGGIEKIN 213          
BLAST of CK936995 vs. ExPASy Swiss-Prot
Match: XTH12_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 12 OS=Arabidopsis thaliana GN=XTH12 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.090e-33
Identity = 77/189 (40.74%), Postives = 109/189 (57.67%), Query Frame = 2
Query:  194 LTTISFDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYRLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSTAMGGDFP-SKPMSLYTTIWDASNWAISGGKAKVN 757
            + T SF + +   +G G       G+ +   L++ SGSGF S K Y  G     IKL   ++AG   A+Y S+     +T DE+DFEFLGNV G+P+   TN +  G     RE ++ LWFDPT  FH Y++LW   NIIF VD +PIR    + A G  +P S+PM +Y+++W+A +WA  GGK K +
Sbjct:   22 VATGSFYDSFDITWGAGRANIFESGQLLTCTLDKTSGSGFQSKKEYLFGKIDMKIKLVPGNSAGTVTAYYLSSKG---ETWDEIDFEFLGNVTGQPYVIHTNVFTGGKG--NREMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKNNEANGVAYPKSQPMKIYSSLWEADDWATQGGKVKTD 205          
BLAST of CK936995 vs. ExPASy Swiss-Prot
Match: XTH19_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 19 OS=Arabidopsis thaliana GN=XTH19 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.884e-33
Identity = 76/186 (40.86%), Postives = 107/186 (57.53%), Query Frame = 2
Query:  206 SFDEGYSHLFGDGN-LIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYRLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSTAMGGDFPSK-PMSLYTTIWDASNWAISGGKAKVN 757
            SF +     +GDG   I    GK + L L++ SGSGF S++ + +G     +KL   ++AG    FY  +      T DE+DFEFLGN++G P+   TN Y  GS    +E+++ LWFDPT  FH Y I W    IIF VD +PIRE + + + G  FP+K PM LY ++W+A +WA  GG  K +
Sbjct:   23 SFHKDVKIHWGDGRGKIHDNQGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKSPGT---TWDEIDFEFLGNISGHPYTLHTNVYTKGSG--DKEQQFHLWFDPTANFHTYCITWNPQRIIFTVDGIPIREFMNAESRGVPFPTKQPMRLYASLWEAEHWATRGGLEKTD 203          
BLAST of CK936995 vs. ExPASy Swiss-Prot
Match: XTH17_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 17 OS=Arabidopsis thaliana GN=XTH17 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.991e-33
Identity = 76/186 (40.86%), Postives = 107/186 (57.53%), Query Frame = 2
Query:  206 SFDEGYSHLFGDGN-LIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYRLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSTAMGGDFPSK-PMSLYTTIWDASNWAISGGKAKVN 757
            SF +     +GDG   I   DGK + L L++ SGSGF S++ + +G     +KL   ++AG    FY  +      T DE+DFEFLGN++G P+   TN Y  G+    +E+++ LWFDPT  FH Y I W    IIF VD +PIRE     A+G  FP++ PM LY ++W+A +WA  GG  K +
Sbjct:   28 SFHKDVQIHWGDGRGKIHDRDGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKSPGT---TWDEIDFEFLGNISGHPYTLHTNVYTKGTG--DKEQQFHLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKNPEAIGVPFPTRQPMRLYASLWEAEHWATRGGLEKTD 208          
The following BLAST results are available for this feature:
BLAST of CK936995 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
XTH15_ARATH9.606e-3539.41Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH25_ARATH1.638e-3441.54Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_WHEAT3.650e-3440.32Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH18_ARATH6.226e-3441.94Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH13_ARATH1.062e-3340.00Putative xyloglucan endotransglucosylase/hydrolase... [more]
XTH8_ORYSJ1.812e-3343.50Xyloglucan endotransglycosylase/hydrolase protein ... [more]
XTH7_ARATH2.366e-3341.30Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH12_ARATH3.090e-3340.74Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH19_ARATH6.884e-3340.86Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH17_ARATH8.991e-3340.86Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004515_E11 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IIF_E11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936995 ID=CK936995; Name=CK936995; organism=Citrus sinensis; type=EST; length=757bp
GGGGAGAAACCAACACACAGCGTAACAAATTTTTATTTATAGAAACCAAA
AAATAATTATGGATTGGTTTCTTTGCTCTCAATCAAAAAAATCATCAGCA
CCCTTCACTCTAATTCTAATTCTGTTGTGTTGCTGCTCATCACCATCACT
TGTGTTCACATTCGCAAACGCATCATCATCACCTGCTTTCAACCTCACCA
CCATCTCTTTCGATGAAGGCTACTCTCATCTCTTCGGCGACGGCAATCTC
ATTCGCTCCCCCGACGGCAAGAACGTTCGTCTCCTCCTCAACCGCTTCTC
CGGGTCCGGTTTTGTTTCGTCAAAATTGTACAATCACGGGTTCTTTAGCG
CGATGATCAAGTTGCCATCGGATCACACGGCTGGCTTATGTGTTGCATTC
TATACATCAAATGGAGACGTGTTCCCAAAAACACACGACGAATTAGACTT
TGAGTTTCTAGGAAACGTGGCTGGAAAACCGTGGAGGTTCCAAACAAATT
TCTATGGAAATGGGAGCACGGCACGCGGCAGGGAAGAGAGATACCGGCTT
TGGTTTGATCCCACGAAGCAATTTCATAGATATAGCATTCTTTGGACAAG
CAACAACATTATATTCTATGTGGATGAAGTACCAATAAGGGAAGTCGTGC
GCTCAACGGCAATGGGTGGAGATTTCCCATCAAAGCCAATGTCATTGTAC
ACAACAATTTGGGATGCCTCAAATTGGGCCATATCAGGTGGCAAAGCCAA
AGTTAAT
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