CK936995

Overview
NameCK936995
Unique NameCK936995
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length757
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936995 vs. ExPASy Swiss-Prot
Match: BRU1_SOYBN (Brassinosteroid-regulated protein BRU1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.174e-32
Identity = 70/165 (42.42%), Postives = 102/165 (61.82%), Query Frame = 2
Query:  266 GKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYRLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSTAMGGDFP-SKPMSLYTTIWDASNWAISGGKAKVN 757
            G+ + L L++ SGSGF S K Y  G     +KL + ++AG   A+Y S+      THDE+DFEFLGN++G P+   TN +  G     RE+++ LWFDPT+ FH YSI+W   +IIF VD  PIR    +  +G  FP ++PM +Y+++W+A +WA  GG  K +
Sbjct:   51 GQLLSLSLDKVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQG---PTHDEIDFEFLGNLSGDPYILHTNIFTQGKG--NREQQFYLWFDPTRNFHTYSIIWKPQHIIFLVDNTPIRVFKNAEPLGVPFPKNQPMRIYSSLWNADDWATRGGLVKTD 210          
BLAST of CK936995 vs. ExPASy Swiss-Prot
Match: XTH21_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana GN=XTH21 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.616e-32
Identity = 75/184 (40.76%), Postives = 106/184 (57.61%), Query Frame = 2
Query:  209 FDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYRLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSTAMGGDFP-SKPMSLYTTIWDASNWAISGGKAKVN 757
            F++     +GDG      +G  + L L++ SGSGF S   Y +G     IKL   ++AG    FY  +  +   T DE+DFEFLGNV+G P+   TN Y  G     RE+++ LWFDPT  FH YSILW  ++I+FY+D  PIRE      +G  +P ++PM +Y ++W+A +WA  GG  K N
Sbjct:   28 FNQDIDITWGDGRGNILNNGTLLNLGLDQSSGSGFQSKAEYLYGKVDMQIKLVPGNSAGTVTTFYLKSQGL---TWDEIDFEFLGNVSGDPYIVHTNVYTQGKG--DREQQFYLWFDPTAAFHNYSILWNPSHIVFYIDGKPIREFKNLEVLGVAYPKNQPMRMYGSLWNADDWATRGGLVKTN 206          
BLAST of CK936995 vs. ExPASy Swiss-Prot
Match: XTH20_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 20 OS=Arabidopsis thaliana GN=XTH20 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.616e-32
Identity = 74/186 (39.78%), Postives = 106/186 (56.99%), Query Frame = 2
Query:  206 SFDEGYSHLFGDGN-LIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYRLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSTAMGGDFPS-KPMSLYTTIWDASNWAISGGKAKVN 757
            SF +     +GDG   I    G  + L L++FSGSGF S + + +G     +KL   ++AG    FY  +      T DE+DFEFLGN++G P+   TN Y  G+    +E+++ LWFDPT  FH Y I+W    +IF +D +PIRE   S A+G  FP  +PM LY ++W+A +WA  GG  K +
Sbjct:   28 SFHKDVQIHWGDGRGKILDNVGNLLSLSLDKFSGSGFQSHQEFLYGKVEVQMKLVPGNSAGTVTTFYLKSPGT---TWDEIDFEFLGNISGHPYTLHTNVYTKGTG--DKEQQFHLWFDPTVDFHTYCIIWNPQRVIFTIDGIPIREFKNSEALGVPFPKHQPMRLYASLWEAEHWATRGGLEKTD 208          
BLAST of CK936995 vs. ExPASy Swiss-Prot
Match: XTH24_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana GN=XTH24 PE=1 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 3.416e-32
Identity = 75/192 (39.06%), Postives = 108/192 (56.25%), Query Frame = 2
Query:  185 AFNLTTISFDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYRLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSTAMGGDFP-SKPMSLYTTIWDASNWAISGGKAKVN 757
            AF+++   F+   +  +G+G      +G+ + L L++ SGSGF S   Y  G     IKL   ++AG    FY  +      T DE+DFEFLGN++G P+   TN Y  G     +E+++ LWFDPT  FH YSILW    II  VD+ PIRE     ++G  FP +KPM +Y ++W+A +WA  GG  K +
Sbjct:   16 AFSVSAADFNTDVNVAWGNGRGKILNNGQLLTLSLDKSSGSGFQSKTEYLFGKIDMQIKLVPGNSAGTVTTFYLKSEG---STWDEIDFEFLGNMSGDPYTLHTNVYTQGKG--DKEQQFHLWFDPTANFHTYSILWNPQRIILTVDDTPIREFKNYESLGVLFPKNKPMRMYASLWNADDWATRGGLVKTD 202          
BLAST of CK936995 vs. ExPASy Swiss-Prot
Match: XTH9_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 9 OS=Arabidopsis thaliana GN=XTH9 PE=2 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 4.462e-32
Identity = 76/184 (41.30%), Postives = 103/184 (55.98%), Query Frame = 2
Query:  209 FDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYRLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSTAMGGDF-PSKPMSLYTTIWDASNWAISGGKAKVN 757
            FDE Y   +   + +   +G+  +L L+ +SG+GF S   Y  G  S  IKL    +AG   AFY S+       H+E DFEFLGN  G+P+  QTN Y NG     RE+R  LWFDPT +FH YSILW+  +++F VDE PIR        G  F   + M +Y++IW+A +WA  GG  K +
Sbjct:   29 FDELYRSSWAMDHCVN--EGEVTKLKLDNYSGAGFESRSKYLFGKVSIQIKLVEGDSAGTVTAFYMSSDG---PNHNEFDFEFLGNTTGEPYIVQTNIYVNG--VGNREQRLNLWFDPTTEFHTYSILWSKRSVVFMVDETPIRVQKNLEEKGIPFAKDQAMGVYSSIWNADDWATQGGLVKTD 205          
BLAST of CK936995 vs. ExPASy Swiss-Prot
Match: XTH23_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana GN=XTH23 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.828e-32
Identity = 74/185 (40.00%), Postives = 104/185 (56.22%), Query Frame = 2
Query:  206 SFDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYRLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSTAMGGDFP-SKPMSLYTTIWDASNWAISGGKAKVN 757
            +F       +GDG    + +G  + L L++ SGSGF S   Y  G     IKL + ++AG   A+Y  +      T DE+DFEFLGN++G P+   TN +  G     RE++++LWFDPT  FH YSILW    IIF VD  PIRE     + G  FP ++PM +Y+++W+A  WA  GG  K +
Sbjct:   25 NFQRDVEITWGDGRGQITNNGDLLTLSLDKASGSGFQSKNEYLFGKIDMQIKLVAGNSAGTVTAYYLKSPG---STWDEIDFEFLGNLSGDPYTLHTNVFTQGKG--DREQQFKLWFDPTSDFHTYSILWNPQRIIFSVDGTPIREFKNMESQGTLFPKNQPMRMYSSLWNAEEWATRGGLVKTD 204          
BLAST of CK936995 vs. ExPASy Swiss-Prot
Match: XTHB_PHAAN (Probable xyloglucan endotransglucosylase/hydrolase protein B OS=Phaseolus angularis GN=XTHB PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 9.940e-32
Identity = 69/165 (41.82%), Postives = 99/165 (60.00%), Query Frame = 2
Query:  266 GKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYRLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSTAMGGDFP-SKPMSLYTTIWDASNWAISGGKAKVN 757
            G  ++L L++++G+GF +   Y  G FS  IK+    +AG   AF  S+ +     HDE+DFEFLGN  G+P+  QTN +  G     RE+R  LWFDPTK +HRYS+LW    I+F VD +PIR       +G  FP ++PM +Y ++W+A +WA  GG  K +
Sbjct:   51 GSEIQLHLDKYTGTGFQTKGSYLFGHFSMNIKMVPGDSAGTVTAFCLSSQNA---EHDEIDFEFLGNRTGQPYILQTNVFTGGKG--DREQRIYLWFDPTKAYHRYSVLWNMYQIVFLVDNIPIRVFKNLKELGVKFPFNQPMKVYNSLWNADDWATRGGLEKTD 210          
BLAST of CK936995 vs. ExPASy Swiss-Prot
Match: XTH22_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana GN=XTH22 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.214e-31
Identity = 73/185 (39.46%), Postives = 104/185 (56.22%), Query Frame = 2
Query:  206 SFDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYRLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSTAMGGDFP-SKPMSLYTTIWDASNWAISGGKAKVN 757
            +F       +GDG      +G+ + L L++ SGSGF S   Y  G  S  +KL   ++AG     Y  +      T DE+DFEFLGN +G+P+   TN Y  G     +E++++LWFDPT  FH Y+ILW    IIF VD  PIRE     ++G  FP +KPM +Y+++W+A +WA  GG  K +
Sbjct:   22 NFQRDVEITWGDGRGQIKNNGELLTLSLDKSSGSGFQSKNEYLFGKVSMQMKLVPGNSAGTVTTLYLKSPGT---TWDEIDFEFLGNSSGEPYTLHTNVYTQGKG--DKEQQFKLWFDPTANFHTYTILWNPQRIIFTVDGTPIREFKNMESLGTLFPKNKPMRMYSSLWNADDWATRGGLVKTD 201          
BLAST of CK936995 vs. ExPASy Swiss-Prot
Match: XTH14_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 14 OS=Arabidopsis thaliana GN=XTH14 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.443e-31
Identity = 70/185 (37.84%), Postives = 106/185 (57.30%), Query Frame = 2
Query:  206 SFDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYRLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSTAMGGDFP-SKPMSLYTTIWDASNWAISGGKAKVN 757
            +F E +   +G+G      +G+ +   L++ SGSGF S K Y  G     +KL + ++AG   A+Y S+        DE+DFEFLGN  G P+   TN +  G     RE ++RLWFDPT  FH Y++ W   NIIF VD +PIR    +   G  +P ++PM +Y+++W+A +WA  GG+ K++
Sbjct:   29 NFYESFDITWGNGRANIFENGQLLTCTLDKVSGSGFQSKKEYLFGKIDMKLKLVAGNSAGTVTAYYLSSKGT---AWDEIDFEFLGNRTGHPYTIHTNVFTGGKG--DREMQFRLWFDPTADFHTYTVHWNPVNIIFLVDGIPIRVFKNNEKNGVAYPKNQPMRIYSSLWEADDWATEGGRVKID 208          
BLAST of CK936995 vs. ExPASy Swiss-Prot
Match: XTH26_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 26 OS=Arabidopsis thaliana GN=XTH26 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.124e-30
Identity = 72/201 (35.82%), Postives = 109/201 (54.23%), Query Frame = 2
Query:  158 TFANASSSPAFNLTTISFDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYRLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSTAMGGDFPSKP-MSLYTTIWDASNWAISGGKAKVN 757
            TF  A  S  F +T      G  H+F +G         N+RL+L++ +GS   S   +  G    +IKL   ++AG   A+Y S+      THDE+DFEFLGN  G+P+   TN Y  G     RE+++R WF+PT  FH Y+I W  + ++++VD  PIR      + G  +P+K  M ++ ++W+A +WA  GG+ K N
Sbjct:   23 TFVEADFSKNFIVTW-----GKDHMFMNGT--------NLRLVLDKSAGSAIKSKVAHLFGSVEMLIKLVPGNSAGTVAAYYLSSTG---STHDEIDFEFLGNATGQPYTIHTNLYAQGKG--NREQQFRPWFNPTNGFHNYTIHWNPSEVVWFVDGTPIRVFRNYESEGIAYPNKQGMKVFASLWNAEDWATQGGRVKTN 205          
The following BLAST results are available for this feature:
BLAST of CK936995 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
BRU1_SOYBN1.174e-3242.42Brassinosteroid-regulated protein BRU1 OS=Glycine ... [more]
XTH21_ARATH2.616e-3240.76Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH20_ARATH2.616e-3239.78Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH24_ARATH3.416e-3239.06Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH9_ARATH4.462e-3241.30Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH23_ARATH5.828e-3240.00Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHB_PHAAN9.940e-3241.82Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH22_ARATH2.214e-3139.46Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH14_ARATH6.443e-3137.84Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH26_ARATH7.124e-3035.82Probable xyloglucan endotransglucosylase/hydrolase... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004515_E11 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IIF_E11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936995 ID=CK936995; Name=CK936995; organism=Citrus sinensis; type=EST; length=757bp
GGGGAGAAACCAACACACAGCGTAACAAATTTTTATTTATAGAAACCAAA
AAATAATTATGGATTGGTTTCTTTGCTCTCAATCAAAAAAATCATCAGCA
CCCTTCACTCTAATTCTAATTCTGTTGTGTTGCTGCTCATCACCATCACT
TGTGTTCACATTCGCAAACGCATCATCATCACCTGCTTTCAACCTCACCA
CCATCTCTTTCGATGAAGGCTACTCTCATCTCTTCGGCGACGGCAATCTC
ATTCGCTCCCCCGACGGCAAGAACGTTCGTCTCCTCCTCAACCGCTTCTC
CGGGTCCGGTTTTGTTTCGTCAAAATTGTACAATCACGGGTTCTTTAGCG
CGATGATCAAGTTGCCATCGGATCACACGGCTGGCTTATGTGTTGCATTC
TATACATCAAATGGAGACGTGTTCCCAAAAACACACGACGAATTAGACTT
TGAGTTTCTAGGAAACGTGGCTGGAAAACCGTGGAGGTTCCAAACAAATT
TCTATGGAAATGGGAGCACGGCACGCGGCAGGGAAGAGAGATACCGGCTT
TGGTTTGATCCCACGAAGCAATTTCATAGATATAGCATTCTTTGGACAAG
CAACAACATTATATTCTATGTGGATGAAGTACCAATAAGGGAAGTCGTGC
GCTCAACGGCAATGGGTGGAGATTTCCCATCAAAGCCAATGTCATTGTAC
ACAACAATTTGGGATGCCTCAAATTGGGCCATATCAGGTGGCAAAGCCAA
AGTTAAT
back to top