CK936995
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936995 vs. ExPASy Swiss-Prot
Match: XTH10_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 10 OS=Arabidopsis thaliana GN=XTH10 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.587e-29 Identity = 73/194 (37.63%), Postives = 108/194 (55.67%), Query Frame = 2 Query: 179 SPAFNLTTISFDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYRLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSTAMGGDFPS-KPMSLYTTIWDASNWAISGGKAKVN 757 S A +++ F++ + + ++ S DG++ L L++ SG+ F S + + G IKL + G VA+Y S+ DE+DFEFLGNV G+P+ QTN Y G REER LWFDP K FH YSILW + I+F VD++PIR G +P +PMS+ ++W+ +WA GG K++ Sbjct: 27 SQASVVSSGDFNKDFFVTWSPTHVNTSNDGRSRTLKLDQESGASFSSIQTFLFGQIDMKIKLIRGSSQGTVVAYYMSSDQ---PNRDEIDFEFLGNVNGQPYILQTNVYAEGLD--NREERIHLWFDPAKDFHTYSILWNIHQIVFMVDQIPIRLYRNHGEKGVAYPRLQPMSVQASLWNGESWATRGGHDKID 215
BLAST of CK936995 vs. ExPASy Swiss-Prot
Match: XTH11_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 11 OS=Arabidopsis thaliana GN=XTH11 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.945e-23 Identity = 56/146 (38.36%), Postives = 84/146 (57.53%), Query Frame = 2 Query: 203 ISFDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYRLWFDPTKQFHRYSILWTSNNIIFYVDEVPIR 640 +++ Y +G L+ + + ++L L++ SGSGF S +Y G+F+ IK P + G+ +FY + HDEL F+ LG G P+ TN Y G G+++R+RLWFDPTK +H YS LW N ++FYVD+ PIR Sbjct: 22 VTWGNNYYQTWGHQALVINKTSE-LQLTLDKNSGSGFESQLIYGSGYFNVRIKAPQTTSTGVITSFYLISRS---SRHDELCFQILGK-NGPPYLLNTNMYLYGEG--GKDQRFRLWFDPTKDYHSYSFLWNPNQLVFYVDDTPIR 160
BLAST of CK936995 vs. ExPASy Swiss-Prot
Match: GUB_PAEMA (Beta-glucanase OS=Paenibacillus macerans PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.545e-11 Identity = 58/189 (30.69%), Postives = 92/189 (48.68%), Query Frame = 2 Query: 188 FNLTTISFDEGYSH------LFGDGNLIRSPDGKNVRLLL-----NRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYRLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSTAMGGDFPSKPMSLYTTIWDAS 721 FN +T +GYS+ + N+ + DGK ++L L N+F + + S+ +Y +G + +K P+ +T G+ +F+T G DE+D EFLG K Q N+Y NG G E+ L FD +K FH Y+ W I +YVD V++ TA + PS P + +W+ + Sbjct: 36 FNRSTWEKADGYSNGGVFNCTWRANNVNFTNDGK-LKLGLTSSAYNKFDCAEYRSTNIYGYGLYEVSMK-PAKNT-GIVSSFFTYTGPAHGTQWDEIDIEFLGKDTTK---VQFNYYTNG--VGGHEKVISLGFDASKGFHTYAFDWQPGYIKWYVD-----GVLKHTAT-ANIPSTPGKIMMNLWNGT 210 The following BLAST results are available for this feature:
BLAST of CK936995 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936995 ID=CK936995; Name=CK936995; organism=Citrus sinensis; type=EST; length=757bpback to top |