CK936984

Overview
NameCK936984
Unique NameCK936984
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length777
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936984 vs. ExPASy Swiss-Prot
Match: 1433G_SHEEP (14-3-3 protein gamma (Fragments) OS=Ovis aries GN=YWHAG PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.103e-36
Identity = 82/129 (63.57%), Postives = 92/129 (71.32%), Query Frame = 1
Query:  175 SSAESKV-FYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAG 558
            SS E K  FYLKMKGDY+RYLAE  TG +R    ES+  AY  A +I+   + PTHPIRLGLALN+SVFYYEI             AFD+AI+ELDTL E+SYKDSTLIMQLLRDNLTLWTSD  DD G
Sbjct:   41 SSIEQKTSFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEI------------TAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDG 157          
BLAST of CK936984 vs. ExPASy Swiss-Prot
Match: 1433B_SHEEP (14-3-3 protein beta/alpha (Fragments) OS=Ovis aries GN=YWHAB PE=1 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 9.981e-35
Identity = 90/184 (48.91%), Postives = 104/184 (56.52%), Query Frame = 1
Query:   10 SLWRIISSIEQKEESRGNEDHVSVIKEYRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGD 561
            S WR+ISSIEQK E   NE    + KEY                                     KMKGDY RYL+E  +G  ++    ++  AY+ A +I+  E+ PTHPIRLGLALNFSVFYYEILNSP            EAI+ELDTL EESYKDSTLIMQLLRDNLTLWTS+   D GD
Sbjct:   59 SSWRVISSIEQKTER--NEKKQQMGKEY-------------------------------------KMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSP------------EAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGD 191          
BLAST of CK936984 vs. ExPASy Swiss-Prot
Match: 1433X_MAIZE (14-3-3-like protein (Fragment) OS=Zea mays PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.597e-24
Identity = 55/61 (90.16%), Postives = 57/61 (93.44%), Query Frame = 1
Query:  388 ILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIK 570
            ILNSPDRACNLAKQAFDEAISELD+LGEESYKDSTLIMQLL DNLTLWTSD  +D GDEIK
Sbjct:    1 ILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTLIMQLLXDNLTLWTSDTNEDGGDEIK 61          
The following BLAST results are available for this feature:
BLAST of CK936984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433G_SHEEP3.103e-3663.5714-3-3 protein gamma (Fragments) OS=Ovis aries GN=... [more]
1433B_SHEEP9.981e-3548.9114-3-3 protein beta/alpha (Fragments) OS=Ovis arie... [more]
1433X_MAIZE1.597e-2490.1614-3-3-like protein (Fragment) OS=Zea mays PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004515_F06 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IIF_F06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936984 ID=CK936984; Name=CK936984; organism=Citrus sinensis; type=EST; length=777bp
GGGTCGATAAGCCTGTGGAGGATCATCTCTTCGATTGAGCAGAAGGAGGA
GAGCAGGGGAAATGAAGACCATGTCTCAGTAATTAAGGAGTACAGGAGCA
AGATTGAGAATGAGCTCAGCAAGATCTGTGATGGGATTCTTAGCCTCCTT
GAGTCTCATCTCATTCCCTCTGCCTCATCGGCTGAGTCTAAGGTGTTCTA
CCTGAAGATGAAGGGTGATTACCACAGGTATCTGGCTGAGTTCAAGACTG
GAGCTGAGAGGAAGGAAGCTGCGGAGAGCACTTTGTTGGCCTACAAGTCA
GCTCAGGATATTGCTTTAGCTGAATTGGCCCCTACTCACCCAATAAGGCT
GGGACTTGCACTCAACTTCTCTGTTTTCTACTATGAAATCCTTAACTCAC
CAGATCGTGCATGCAATCTTGCGAAGCAGGCTTTTGATGAGGCCATTTCT
GAGCTCGATACCTTGGGTGAAGAATCATACAAGGACAGTACATTGATTAT
GCAGCTTCTCCGAGATAATCTGACACTTTGGACTTCTGATATCACTGATG
ATGCTGGAGATGAGATTAAGGAAGCAGCATCAAAACGTGAATCAGGGGAG
ACGCAGCAGTGATGAATAATGAGTTCAGTTCATAGGATATGTATCTGTAT
TTTTTATCTTGTGGCTTTTATTTTACATGGATGCCATGTGGGTTGTTTTA
GCAGGATATTCTCATGAACTGATAATCTTGAGTGTTGGCTGCACTTAGGG
TTTATGTGTTCCAACAGATTGTAAACT
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